Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       ------->TEIL        <---------ARR14(2)                                                          <---------ALFIN1        <-----------ARR10                                                         --------->ANAC58        --------->ARR14(2)                                                        --------->ANAC46       <---------GLK1(2)                                                  ------>MYB83 <---------ALFIN1    <---------LBD16                                                     --------->MYB46(3)  ------>NtERF2 ----------->HVH21                                       --------->DEAR3(1) ------->At4g35610                                                      <---------MYB46(2) --------At4g35610             ---------->DOF2                          <---------MYB59--------->AtMYB61 -----ANAC46    ----------->TGA1                                       --------->DEAR3(2) -----ANAC58  <---------At4g35610                             <------MYB46(1)     --------->ANAC58 -----ANAC58  --------->At4g35610                             <------MYB83------>MYB46(1) --RAV1(1)    ----------->RAV1(2)           <---------YAB1   --------->MYB59    ---------->DOF2   ---   ttgcagcccggttctcccctgacgataaatactcaaagcagagagtattgttgaagaagcgatttggtctcttaccgacccaaaacgcacctctccagta  8839800                            <------MYB46(1)                            <---------MYB46(3)                    <---------ANAC58                    <---------ANAC46                    <---------ANAC58           --------->ANAC58 <------MYB83           --------->ANAC58<---------AtMYB61       --------->ANAC58 <-----------RAV1(1)              <-----------RAV1(1)       --------->ANAC58 --------->ALFIN1       --------->AHL20(2)    XXXXXXXXXXXXXXXXXXXX>MIR164C               <---------AHL20(2)                      --------->DEAR3(2)    XXXXXXXXXXXXXXXXXXXX>MIR164A/B         <----------DOF2                     <<<<<<<<<<WRKY63     - ------>ICU4 --------->MYB46(3)     --------------->AtSPL8                 --------->ICU4   <--------   ctgatgaagaagcaaaccacttgcctgtgttggtttttgatgttcctttttaatttgctatgttgtctcttaatgaaatgttgacttgaaccgtctttgt  8839900                                                                         --------->TOE2(3)                                                                  <---------AHL20(2)                                                           ---------->DOF2                                     ------>MYB46(1)  --------------->AGL15     --------->GLK1(2)  <-                                     ------>MYB83----------->RAV1(2)  <-----------GT1     <---------ZAT18                                  --------->ANAC55(2)----------------->AGL3  <---------TOE2(3)    <--                                <-----------GT1--------->ANAC58  <---------AHL20(2)    <---------ANAC58 -------->ARR11(3)           <---------ICU4    --------->ANAC58  --------->AHL20(2)    <---------ANAC58 --DOF2     <---------ZAT6  --------->ICU4 <-----------HVH21 --------->ICU4 --------->YAB1--------->ZAT18   aatgtcttcaaatagtgtgagttaagagcaatttttacctatcgtcgtcaagcctgccacttaaagattaatttacattaagaatttgtgagtgcccatt  8840000            <---------ANAC58            <---------ANAC46            <---------ANAC58                         --------->TOE1(3)          --------->ANAC58     <----------DOF2                           --------->ANAC58                 --------->ANAC58    <---------ANAC58                       --------->ANAC58                   <--------P          <--    <---------ANAC58                       --------->ANAC58                <---------TOE2(3)     ---- ----------RAV1(1)              <---------YAB1 --------->ANAC58    --------->YAB1                <--- -------TOE2(3)                --------->TOE2(3)     --------->TOE2(3)   ---------->DOF2       ------   tatgttgctttgtttcttgtcaactagaaacttcattaatggctcaagtaagaaaccataaacagagtatcatatcaaaggtaagtaaaccagagagaag  8840100                                                           <---------TOE1(3)                                                           <---------TOE2(3)           --------->YAB1                      ----------->GT1          --------->AHL20(2)    --------->TOE2(3)         ---------->DOF2 ----ZmHOX2a(2)                 --------->TOE1(3)        <---------AHL20(2)         <---------HSFB2a(2) ----->ARR11(3)         ----------->GT1  --------->HSFB2a(2)            <---------ZAT18 ------ARR11(3)       ----------->RAV1(2)<---------HSFB2a(2)     <---------YAB1     --------->HSFB2a(2) ----->ARR10      <-----------GT1    <---------GLK1(2)   --------->AHL20(2) <----------DOF2      <---   atcatcaacaaaataaaaatttacacctgtaaaacctcaaattctcgaattgaaacaaattaaagttatgtttgggcccttttgttccaggcccatgaaa  8840200                                                                                      <---------ALFIN1                                                                                 --------->HSFB2a(1)                                                                                 <---------HSFB2a(1)                                                                                 <---------HSFC1(2)                                                                               --------->ARR14(2)            ---------->DOF2                                                    <---------GLK1(2)         <---------RAP2.6(3)                                                 --------->LBD16         ------>NtERF2                                                      --------->ANAC55(2)        --------->DEAR3(1)                    *TSS                          --------->ANAC46        --------->RAP2.3(3)                   ----------->GT1               <---------ANAC55(2)        --------->ATERF1(2)                 ---------->DOF2                <---------LBD16        <---------ETT(1)               ---------->DOF2                   <---------ARR14(2)       --------->DEAR3(2)           --------->HSFB2a(2)                  --------->ARR14(2)    ------   <---------ANAC58                 <---------HSFB2a(2)                 <---------GLK1(1)      ------   <---------ANAC58                 --------->HSFC1(1)             <----------ID1--------->HSFC1(2) ---------CBF                       <---------HSFC1(1)          ---------->DOF2<---------ARR14(2) ---   attgtccgtgccgacaaagtcagttttttttggttcttcgagaaagaaaagaaaaacaaaatgaagaaaagaacaaatccggaatcgtccacctctgaag  8840300          <------NtERF2             <---------ANAC46         --------->LBD16            <-------GAMYB         ------>NtERF2              <---------ANAC58         <---------ATERF1(1)        <---------ANAC58        --------->DEAR3(1)         <---------MYB46(3)        <---------DEAR3(1)         --------->MYB52(2)                               <---------ARR11(3)        <---------ATERF1(2)        <------MYB46(1)                             <------ZmHOX2a(2)        --------->ATERF1(2)        <------MYB83                                ===================HOX2a_HOX2a       --------->ATERF1(1)    --------->DAG2                                 <------ZmHOX2a(1)       <---------LBD16       ---------->DOF2                               <---------TOE2(3)     --------->ANAC58    <---------YAB1                               --------->ARR14(2)     --------->ANAC58 ----------->TGA1                                <---------ARR11(3) --->ANAC58         <---------At4g35610                               <-----------ARR10 --->ANAC58         --------->At4g35610                               <---------ARR14(2) ------->DOF2    <------ZmHOX2a(1) --------->MYB55(2)                 --------->GLK1(2)    ------>ZmHOX2a(1)   caaagaaacgccggcgagaggaagatgacgataaagttggttgtagtcactctgcaattgaagatggagcagtatctgaggatcaatgtcttcctcttgg  8840400                                                                   <-------GAMYB                                                                  <-----------RAV1(1)                                                                  --------->MYB52(2)                                                                  --------->MYB111(1)                                                                  --------->MYB111(2)         ------>ZmHOX2a(2)                                                                  <---------MYB46(3)        <--------                                                                  --------->MYB55(2)        <--------                                                                <---------ANAC58            ---------                                                                <---------ANAC58        <------ZmHOX2a(1)                                                               <---------MYB46(3)       =============HOX2a_HOX2a                                       >>>>>>>>>GATA-1   <<<<<<<<<<<<<<<<<LFY    >>>>>>>>>WRKY18    <       ------->TEIL                  ----------->GT1     ----------->RAV1(1)    ----------->HVH21  <-   tgagttttgaatctattgagttggattttgtaattcggatagataaatagctctaattccaacattggttgttgctctgtttttgacagaggatgatctc  8840500                                                --------->TOE1(1)                                                --------->TOE2(1)                                           --------->ARR14(2)                         --------->KAN4(2)                                    <---------ZAT2                                    --------->ARR14(2)         <---------HSFC1(2)         --------->ZAT2                                    <---------ARR14(2) -ARR11(3)                          --------->At4g35610       <-------TEIL            <---------GLK1(2) ---ARR10--------->HSFC1(2)      <---------ANAC58     <---------WRKY18(1)            <---------KAN4(1) >ARR11(3)     <---------At4g35610  <---------At4g35610  <-----------RAV1(2)         --------->KAN4(1) ----------DOF2<-------GAMYB<---------ATHB12   ------>ZmHOX2a(1)   --------->AHL20(2)<----------TaMYB80 --------DAG2 <-----------RAV1(1)<---------ANAC58    --------->WRKY38(1)            ---------->TaMYB80   acctttagcgatacttctgttgcccttcgaatgatgcgagctcagtttcctcgtattgaccaggttcgattatttgatcaaattggcatattctcttgaa  8840600                                                 ---------->DOF2                                            ----------->GT1                                          <---------YAB1        <---------ANAC58  <---------ARR14(2)                   <---------YAB1           <---------ANAC58  --------->PCF2  ---------->DOF2   --------->ICU4              <---------ANAC46           ----------  --------->ARR14(2)                <---------YAB1          <----------DOF2            <---------ARR11(3)   atcggaccctcttatactctgaaagttgaaacgctgtgaagattattagttaaaagtctctccttttcttgtacttgtagttttgtcaatttctttgtac  8840700  Previous    Next  AGI:  At2g20490.1    Description:  EDA27/NOP10 (embryo sac development arrest 27); RNA binding. Identical to H/ACA ribonucleoprotein complex subunit 3-like protein [Arabidopsis Thaliana] (GB:Q93XX8;GB:Q9SIM0); similar to unknown [Populus trichocarpa] (GB:ABK93912.1); contains InterPro domain Nucleolar RNA-binding protein Nop10p (InterPro:IPR007264) Range:  from: 8838803    to: 8839997    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g20495.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO40614.1) Range:  from: 8840246    to: 8842344    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version