Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 ------>ZmHOX2a(2)                                                              <---------GLK1(1)                                                              <------ZmHOX2a(2)                                                              <<<<<<<<<GATA-1                                                              <<<<<<<<<GATA-2                                                              <<<<<<<<<GATA-3                                                              <<<<<<<<<GATA-4                                                             <---------AGP1                                                             --------->ARR11(3)                                                             <---------ARR11(3)                                                    <-------GAMYB <----------DOF2                                                    --------->At4g35610              <----------DOF2                                                    <---------At4g35610<---------TOE2(3)  <---------AHL20(2)              <----------DOF2          <---------ANAC58 <---------ANAC46       --------->ATHB12          ------>NtERF2                <---------ANAC58 <---------AtLEC2      <---------YAB1    ------->TEIL         <----------DOF2           --------->MYB52(2)  <---------TOE1(3)  --------->AHL20(2)   gaaatgtatcggagccctttcaagaggcttttcatcttggagcttgacattgtgagttgcatagatctctttttaggtttatgatttcttttttaaataa  8816900                                                                          --------->At5g28300                             <------MYB83           --------->LBD16<---------MYB46(3)                        <---------YAB1             --------->HSFB2a(2)   ----------->GT1          <--                <----------ID1                     <---------HSFB2a(2) <------NtERF2            -----          <---------ZAT14--------->YAB1           <---------LBD16 --------->ALFIN1    <------ZmHOX2a(1)          --------->ZAT14--------->ATHB12    <---------DAG2    --------->DAG2       <---------TOE2(3)      <---------------AtSPL8 <------MYB46(1) <----------DOF2  ---------->DOF2 --------->ICU4   <-----   gaaaaatgggagtacagaagaacaaaatgataggttttgaaaactcacttttcccagaaaataagaaagtggtggcagtaaatattgaggaaacaaaatg  8817000        <---------AHL20(2)        --------->AHL20(2)                                                                       ----        --------->AHL20(1)                                                                      <----       --------->AHL20(2)                                                      <------MYB46(1)  <---- >>>>>>>>>GATA-1                    <---------ARR11(3)                         <------MYB83 <-------- -------WOX13(1)                    --------->ARR11(3)                        <---------TOE1(2) ----- ---->ATHB12                        <---------AHL20(1)          <---------At4g35610    <----------DOF2 ----YAB1     <---------ANAC46      --------->AHL20(1)          --------->At4g35610 <-----------GT1   atagataaaaaaaattgtgtatatagtcaagactccaaaatattgttcagagagaaacaagaattcatctcagaaaattgtaggtttatctttctgcaga  8817100                                                                                                   --                                                                                              ------>ZmHOX2a(1)                                                                                             --------                                              --------->CCA1(2)                           --------->ARR14(2) ----->GLK1(2)                               --------->ARR11(3)                           <---------ARR11(3) -----GLK1(2)                        --------->YAB1                                  ------>MYB83  <- -----ARR14(2)           --------->YAB1  ---------->DOF2<---------ANAC55(2)          ------>MYB46(1) -At4g35610  ---------->DOF2     ------>ZmHOX2a(1)<---------TOE2(3)             <-----------GT1    <- ---->ARR14(2)  <----------ID1 --------->YAB1<---------ARR11(3)        <----------DOF2    <---------ARR14(2)   ttcttctatatatcaaaaagaacaaattgataatcctaataagaaaagatttaagaatacataaacaaaattcctttgaaatttacctacaaaatcctca  8817200           <------ZmHOX2a(1)          ----------->GT1   <---------------AGL15   --------------->AGL15  <-----------------AGL1                                                          --------->ATHB12 ------->ZAT14                                                                   *TSS             <-- ->TOE2(3)<----------ID1                                            <---------ARR11(3)            <-- --------ZAT14           --------->MYB46(3)           <---------TOE2(3)         <---------WOX13(1)--- --------ZAT18    ---------->DOF2            --------->YAB1         --------->ARR11(3)         <-----   gagtactccaagaggaaaaaaaaagcatcaaacgaagaaactaagaatcaaaaatgaaggaaactaagaagatgtttgtttgaatgatgggttgagagcg  8817300          --------->ANAC46          --------->ANAC58          --------->ANAC58        --------->CCA1(2)     ----------->HVH21   <---------At4g35610                                                ------------>CBF <-----------RAV1(2)     --------->ZAT18                           <-------GAMYB -------ARR14(2)        ----------->GT1                           ----------->GT1                  <- -------ZAT14        <---------------AtSPL8                       <---------MYB46(3)         -------- ------>ARR14(2)  ---------->DOF2                       <---------MYB52(1)               <---------YAB1 ----ANAC46----------->GT1                             --------->TOE2(3)          <<<<<<<<<GATA-1----   tatacaggtgatacggcaaaaaaagagtgcaaaaatgtttgtttaaaccaaaattttcgttaatctgatggttacaatttgtttatctattactatcaga  8817400                                                                       <---------AHL20(2)                                                                    --------->TOE2(3)                                                                  <---------YAB1                                                                  <---------TOE2(3)                                                              --------->TOE2(3)                                                             --------->ATHB12                                                             <--------HAHB4                                                             <---------ICU4    --------->YAB1                                           --------->YAB1   <---------ATHB12                <---------MYB52(1)       --------->ICU4 --------->WOX13(1)               --------->TOE2(3)         <---------ATHB12 --------ATHB12                  <---------ANAC55(2)        <---------YAB1         ---------->ID1 ->YAB1    --------->YAB1      <-----------GT1            --------->YAB1      <----------DOF2 ----->GLK1(1)    ----------->GT1--------->ANAC55(2) <---------ATHB12 --------->AHL20(2)     <-------   aatcaatcaaaaattagaattagtatatagaaattacgttattctgttccatcaaatgaataatcattaacattaattttcttttgtctctctctgtttt  8817500                                                                  <---------AHL20(2)                                                                  --------->AHL20(2)                                                                 <---------AHL20(2)               --------->TOE2(3)                                 <---------AHL20(1)             <---------ARR11(3)                                  --------->AHL20(1)             <---------ARR11(1)                                  --------->AHL20(2)             --------->ARR14(2)                                 <---------AHL20(2)             <-----------ARR10                                  --------->AHL20(2)            <---------CCA1(2)                       <---------AHL20(2)        ----------->GT1     <----------DOF2                                --------->AHL20(2)       <---------------AtSPL8  <-----------GT1                         --------->GLK1(2)  <---------AHL20(2)                    <- --MYB52(1)<---------------AGL15 ------->TEIL----------->GT1 --------->AHL20(2)              ------->TEIL   tttttttcttttccaaatcttagtaaacttcaatgtatgtagagaatgtgttaattaaactcttaaattaatttagaaaatggtacaaaaacatgaattt  8817600                                                                              <---------GLK1(2)                                <---------AHL20(2)                          <---------ARR11(3)                            --------->AHL20(2)                              <---------AHL20(1)                            <---------AHL20(2)                              --------->ARR11(3)                           --------->AHL20(2)                  <---------AHL20(2)                           <---------AHL20(2)      ----------->GT1          --------->AHL20(1)                        --------->AHL20(2)  <---------AHL20(2)<---------AHL20(1)                     <---------ANAC55(2)    --------->AHL20(2)<---------AHL20(2)                  <------ZmHOX2a(2)         --------->YAB1    --------->AHL20(2)              <------ ---------DOF2   <---------ARR11(3)  ----------->GT1    --------->ZAT6<---------TOE2(3) <---------DAG2   tcttttattctcacacatagatcacataaattaataaatgtgtgaattatatgctgtaacacaattttttttgacgaaaatattctctcaatttttgtat  8817700                                           --------->AHL20(2)                                         <----------DOF2                                      <---------AHL20(2)    <---------YAB1                                      <-----------GT1     <---------ICU4                                  <---------AHL20(2)      <--------HAHB4                                  --------->AHL20(2)     <---------ATHB12                                 <---------AHL20(2)      --------->ICU4                                 --------->AHL20(2)      <---------YAB1                               --------->TOE2(3)       --------->YAB1                 <---------TOE1(3)                             --------->AHL20(1)     --------->YAB1       <---------TOE1(3)                             <---------AHL20(1)--------->AHL20(2)        <---------TOE2(3)                          --------->AHL20(2)   <---------AHL20(2) <-------TEIL        <---------TOE2(3)     <-----------HVH21   --------->YAB1  --------->TOE2(3)--------->YAB1<-----------GT1          <--- ---AtLEC2              --------->AHL20(2) <---------AHL20(2)--------->AHL20(2)       <---------YAB1-   gtctctatgtcatttgctattagcaaataaaaatattaatttactttaattaaaaaataatcattatatacatttaacgatttttcttaagattatacat  8817800  Previous    Next  AGI:  At2g20430.1    Description:  RIC6 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 6). similar to RIC7 [Arabidopsis thaliana] (TAIR:AT4G28556.1); similar to desiccation-associated protein [Lilium longiflorum] (GB:AAQ05795.1); contains InterPro domain PAK-box/P21-Rho-binding (InterPro:IPR000095) Range:  from: 8815748    to: 8817281    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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