Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <--------                                                                                       --------->ATHB12                                                                             <---------MYB52(1)                                                                            --------->TOE2(3)                                                                            <----------DOF2 <--------         <---------ARR11(3)                                                <---------ANAC46 <--------   <---------ZAT14                                                         ----------->GT1  <--------   --------->ZAT18                                                   --------->ZAT14  <---------YAB1   --------->ZAT14          <---------ANAC46                         <---------ZAT14  --------->ICU4 -------YAB1          <---------ZAT6   <-----------GT1               --------->ARR14(2)<---------ICU4 --->ICU4--------->ARR11(3)<---------TOE2(3)                         <---------ARR14(2)--------->ATHB51 >GT1   <---------RVE1(1)  <---------AtMYB61  <----------DOF2     ------>ZmHOX2a(1) --------->YAB1   ctgagtgcagagattttagatttagtgtttaggtggattttaaactagcttttatttcgagtttcttcctgtatactgcgttaatttcataattgcatgt  8809000                                             <----------DOF2                                 --------                                            <---------ANAC58                    <---------TOE2(3)                                            <---------ANAC58                  =======================                                      <---------YAB1                          ---------->DOF2--------                                     <---------AHL20(1)         --------->ARR14(2)           <-------                                     --------->AHL20(1)         <---------ARR11(3)           <-------                                     --------->ARR11(3)         --------->ARR11(3)           ========                                     <---------ARR11(3)         --------->ARR11(1)           -------- -ANAC58                           --------->ARR11(3)           <---------ARR14(2)         <---------ALFIN1 -ANAC58                           <---------AHL20(1)         ----------->ARR10 <---------TOE1(3) -ANAC46                           <---------ARR11(3)------->MYC3--------->GLK1(1)      --------->PCF2 -AtLEC2                           --------->AHL20(1)<-------MYC3--------->CCA1(2)      ---------->ID1   atggaatcaactcatgtaagttagattaatcttcgaaaatatttttgcttttgcatatggaagaaagatatgcacaagattaaaggttttgtcccacatc  8809100                                                                                                  ---                                                                                                  <--                                                                                            <------ZmHOX2a(2)                                                                                           xxxxxxxxxx                                                                                        xxxxxxxxxxxxx                                                       ------>ZmHOX2a(2)                xxxxxxxxxxxxx                                    <---------AHL20(2)<------ZmHOX2a(2)                 xxxxxxxxxxxxx                              ----------->GT1        --------->ARR11(3)          xxxxxxxxxxxxxxxxxxxx  <---------ZAT2           -------->P---------->DOF2 <---------ARR14(2)         <----------DOF2   --- ->ANAC46                  ------>MYB46(1)           --------->ARR14(2)        <---------DAG2xxxxxxxx ==bZIP_DOF                ------>MYB83              <---------ARR11(3)      ------>NtERF2 <---------ARR11(3) ->O2                    --------->AtMYB61  --------->At4g35610       <----------DOF2  xxxxxxxxxxxxxx --ALFIN1                <---------MYB59 ---------->DOF2<----------DOF2      ---------->ID1--------->ARR11(3) --O2                   --------->DEAR3(2)  --------->ZAT2          xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ===================================MYC_MYB <---------ZAT2      --------->YAB1xxxxxxxxxxxxxxxxxxxxxxx ->TGA1a                --------->MYB46(3)  <---------At4g35610<---------ATHB12<----------DOF2<xxxxxx   gctaagctcgtgaagcattagtcagaaccaacctgtatataaagaaagctgggccgatctttcaaatcatacctttctcggccttttggctaagatcaag  8809200                                                   --------->ANAC58                                                 --------->ANAC46                                                 <---------ALFIN1                                                <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                               <---------ALFIN1                                               <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                               xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                              xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                           <-----------TCP11(1)                                         <---------At4g35610                                     <---------PCF2--------->ANAC58                                    ----------->TCP11(1)        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   --------->GLK1(2)              --------->ALFIN1xxxxxxxxxxxxxxxxxxx>smallRNA(se3)   <---------ARR14(2)           <-----------RAV1(1)--------->ANAC46                            <-----   --------->ARR14(2)        xxxxxxxxxxxxxxxxx>smallRNA(fl3)                                  ------- ------>ZAT14               xxxxxxxxxxxxxxxx>smallRNA(s)                                      <------ -------ZAT14           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                <--------P xxxxxxxxxxx>smallRNA(si3) <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                            <---------TOE2(3) xxx>smallRNA(si3)      --------->ARR11(3) <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)   --------------->AGL15 xxx>smallRNA(se3)      <---------ARR11(3)<xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       <---------------AGL15 xxx>smallRNA(fl3)      xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                        <-----------------AG xxx>smallRNA(i2)      --------->RVE1(1) --------->At4g35610                      ----------------->AGL1 ------>ZAT18         xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) --------->ZAT6        <-----------------AGL1 xxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                 xxxxxxxxxxxxxxxxxxxx>smallRNA(l2) xxx>smallRNA(si3) <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     <-----------GT1     xxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xx>smallRNA(se3)  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)<---------ARR11(3)       <------ZmHOX2a(1)<----- xxxxxxxxxxxxsmallRNA(si3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)         <---------TOE2(3)<---------TOE1(3)   tgtagtatctgttcttatcagtttaatatctgatatgtgggccatcggcccacacgatattaactctattttttaagggaggaagcccattaaggtagct  8809300                                                 xxxxxxxxxxxxxxx>smallRNA(fl3)                                                xxxxxxxxxxxxxxxx>smallRNA(fl3)                                              <---------ANAC58                                              xxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                              xxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                             xxxxxxxxxxxxxxxx>smallRNA(s)                                            xxxxxxxxxxxxxxxx>smallRNA(s)                                           <-------PIF5                                        xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                       xxxxxxxxxxxxxxxx>smallRNA(i)                                       --------->ZAT14                                       --------->ZAT18                                       <---------ZAT14                          xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                          xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                          xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                         <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ------------>CBF                        <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)--------->ANAC58                        xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->ANAC58         --------->ARR14(2)<---------ANAC58xxxxxxxxxxxxxxxx>smallRNA(s)         <---------ARR14(2)<---------ANAC58------->PIF5  --------->MYB46(3)        <---------GLK1(1)xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)------>NtERF2        --------->GLK1(1)xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)--------->LBD16                     <-----   --------->TOE2(2)   xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)--------->ANAC46                <---------DAG2  ----------->RAV1(2) <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ------->GAMYB                    <----------DOF2  <---------ZAT2     <------NtERF2  xxxxxxxxxxxxxxxx>smallRNA(s)                       <-----------GT1 -------->P        <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  -------->P                 <-----------GT1 ----ANAC58        --------->DEAR3(1) xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)--------->ATHB12<------ -->At4g35610     --------->ATERF1(1) xxxxxxxxxxxxxxxx>smallRNA(s)           --------->ICU4   <------ ---At4g35610--------->LBD16   <---------ZAT18<---------ANAC58        --------->YAB1 <----------DOF2 ----ANAC58<---------LBD16<xxxxxxxxxxxxxxxxsmallRNA(s)<---------ALFIN1----------->GT1<---------DAG2   tgctacctgggtttccgcgagtcgcccatgcgttgcactactgcacgggcttggctcaacccgccaatcgaatagtaaaatgatttactttactttataa  8809400       <------------CBF      --------->ATHB12      -------->ATHB1      --------->ATHB51                                                   --------->ETT(2)     <---------AHL20(2)                                                 <---------HSFB2a(2)     --------->AHL20(2)                      <---------At4g35610------>MYB46(1)     <---------ATHB51                   <---------LBD16       --------->TOE2(2)  <------ZmHOX2a(1) <-     --------->ICU4               <---------DAG2              --------->TOE1(2) <----------ID1     <- ----ICU4                   --------->YAB1   --------->At4g35610------>MYB83  <---------At4g35610 <-- ---YAB1                 *TSS     <----------DOF2  --------->ZAT6       --------->HSFB2a(2)   <------ ---AHL20(2)         ----------->GT1  ----------->HVH21    <-----------GT1    --------->At4g35610 <--   tttccaaattattgatataagcgtagttaataaaaactttttgacggagctaaacactaattaacctacgtcttctcgacagaggacaaactcaaattcg  8809500                                                                           --------->ATHB12                                                                         <---------WOX13(1)                                                                         <--------P                                                                       <------MYB46(1)                                                                       <------MYB83   ----------->GT1                                                     <---------MYB46(3)  <------MYB46(1) -----MYB46(1)                                  --------->ATHB12     <---------WOX13(1)    <------MYB83 -----MYB83                                   <----------DOF2      --------->ATHB12       --------->MYB59 -------TOE1(2)                             --------->At4g35610    <---------MYB46(3)     <---------TOE2(3) -TEIL                                      <---------At4g35610   <---------YAB1  <---------ARR14(2) -------TOE2(2)                     <---------TOE1(2)        --------->TOE2(3)    --------->ARR14(2)   taggtgagaaaaattcgattttggaattgttcatattctaggtttgagcttaattggatatatccttggtgattggttgatttggattcgattaggttta  8809600                                                                                 --------->ANAC46                                            <---------ANAC58          <---------WRKY18(1)                                            <---------ANAC58         ----------->HVH21                                            <---------TGA1a        <---------ANAC58                                            <---------ANAC46       <---------ANAC58                              ========================bZIP_DOF  --------->LBD16<---------At4g35610                              ---------->DOF2            --------->ANAC58      --------->At4g35610                      <---------HSFB2a(2)   <---------O2 --------->ANAC58  --------->AtLEC2  <-------   agtataggttttgatatttggattttggaagaaaaagagtgatgagtcgtgggaattacaagaacccgtgcttgaccatgcatcagccatgggcatcact  8809700                                           --------->LBD16                                     <---------ANAC58                                     <---------ANAC58                               <------ZmHOX2a(2)                              --------->AGP1                              <---------ARR14(3)                              <-----------ARR10                              <---------ARR14(2)                              --------->ARR14(2)                              <---------ARR11(3)                              <---------GLK1(2)                              --------->ARR11(3)                              --------->ARR14(3)                             --------->GLK1(1)                             <---------At4g35610                            ----------->ARR10                                                    <---                   ------->TEIL--------->GLK1(2)                                                 ----                --------->ANAC58  ------>ZmHOX2a(1)             --------->TOE1(3)  <---------ARR14(2)                --------->ANAC46------>ZmHOX2a(2)               --------->TOE2(3)  --------->ARR14(2) --ALFIN1       --------->ANAC58----------->RAV1(2) ----------->GT1           <---------LBD16   -----   tctcgtccatggtatcaaacgcatcgaaggcagatcctggccttccccaattcgaggtaaaaaaaaccctaattttgaactcagggattcgactgagatt  8809800                      --------->ATHB12                      <---------ICU4                     <---------YAB1                                                              ---- ------AHL20(2)      --------->ICU4                                           <---------MYB52(1) ---- ----->AHL20(2)    --------->YAB1       >>>>>>>>>TBF1              --------->AHL20(2)  <-------TEIL ---->AHL20(2)    <---------YAB1 <----------DOF2                 ----------->GT1  <---------TOE2(3) -   taatttgaatttgaaacactgtgataattgcataactttgaagaagaagatgatgttgtttttaaacatgtaaataggccgtttatggattcatgctgca  8809900  Previous    Next  AGI:  At2g20400.1    Description:  myb family transcription factor. similar to PHR1 (PHOSPHATE STARVATION RESPONSE 1), transcription factor [Arabidopsis thaliana] (TAIR:AT4G28610.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40570.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 8806268    to: 8809054    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g20410.1    Description:  activating signal cointegrator-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO65036.1); contains domain PTHR12963 (PTHR12963) Range:  from: 8809425    to: 8811454    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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