Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       ------>ZmHOX2a(2)                                                                                    <------ZmHOX2a(2)                                                                                   --------->ARR14(2)                                                                                   <---------ARR14(2)                                                                            <---------YAB1                               <---------AHL20(2)                           <---------AHL20(2)         ------->TEIL          --------->AHL20(2)                          --------->AHL20(2)  <---------YAB1        --------->ZAT6                                  --------->AHL20(2) ------ICU4      <----------DOF2                                  <-----------GT1 <------ZmHOX2a(1)   tgttacgaatgaaactcaacttttaaacactaaaaaaatgtgtatatttgcagtccagattacaaaataaaccattatataataggatccaactgtattt  8791500                                                                       <--------ATHB1                                                                       --------->ATHB12                                                                       --------->ATHB51                                                                       --------->YAB1                      --------->ARR11(3)                               -------->HAHB4                      <---------ARR11(3)                               <--------HAHB4                     --------->CCA1(1)                                 <---------ICU4             <-------GAMYB                                            --------->ICU4            <---------MYB46(3)                                        --------->AHL20(2)            --------->MYB111(2)                                       <---------ATHB51            --------->MYB46(2)                                        <---------YAB1        --------->MYB59                                             --------->YAB1        <---------TOE2(3)          ----------->GT1                  <---------ICU4        --------->DAG2--------->AHL20(1)    <------MYB83<-----------HVH21--------->ICU4  --------->AHL20(2) --------->RVE1(1)      <------MYB46(1)      --------->YAB1              --------   tgacttaaataaggtagttgaaaatatcttgactaagaagtatatttggtttactcggtgtcaagactaataataattagtaagtagtgtatcgaataaa  8791600                                                                                             <-------                                                                                     <---------ARR11(1)                                                                                     --------->ARR14(2)                                                                                     ------->TEIL <--                                                                                     <-----------ARR10                                                                                     <---------ARR14(2)                                                                                    <---------ARR14(1)                                                                                  <---------ANAC46<--                                                                                 ------>NtERF2-------                                                                                <---------ANAC46 <<<<                                 --------->ZAT14                               <------NtERF2 --------                                 <---------ZAT14                               --------->ATERF1(1)<--                               --------->ANAC46                               ------>NtERF2  <-------                          <---------ARR11(3)                              <-----------RAV1(1)--------                          --------->ARR11(3)                             <---------WOX13(1)  <-------         <----------DOF2 --------->RVE1(1)                       ----------->RAV1(1)<---------CCA1(2)         <---------DAG2  --------->CCA1(1)          ---------->DOF2--------->ZAT6--------->LBD16 <<<< ------------>CBF    --------->AHL20(2)           <---------HSFB2a(2)   <------------CBF     -------- ->AHL20(2)          <---------AHL20(2)    ------->TEIL----------->GT1 --------->ATHB12  ---------->DOF2   tatagcaatcgcttttgcagaaaataaatatctactgaacagatgtatcgttctcaaaggaaaaaaacaacactaattggtgccgcgtatctaaagattt  8791700   <---------PCF5   <---------PCF2 --ARR14(2) -------AtLEC2 -------ANAC58 -->CCA1(2) <<<<<<ABI3 ->ARR14(2) -------ANAC58                                       <-----------TGA1 --ARR11(3)                           <----------DOF2<-----------HVH21 ->ARR11(1)                          --------->TOE2(3)                         --------->ANAC46 --GLK1(2)                        <-----------GT1   --------->ANAC46    <---------ARR11(3) <---------ALFIN1 <<<<<<FUS3                   ----------->TBP <---------ANAC58          --------->ARR11(3) --------->ZAT6 ->ARR11(3)           --------------->AtSPL8  <---------ANAC58   <----------DOF2  <---------ALFIN1   gcatgggaccatatgtctagtagtctagtaccatataaacctttttttgcttactcgtcagtagtttcttttgaaatcttcacaacactttcaacacttc  8791800                                                ----------->GT1                                            <---------ARR14(2)                                            --------->ARR14(2)                                          --------->LBD16                                         --------->ANAC46                                        <---------LBD16                                        ------>NtERF2                   --------->ATHB51     --------->At4g35610                   <---------AHL20(2)   <---------At4g35610            --------->MYB52(1)          --------->LBD16                              --------->TOE2(3)         --------->ANAC58        --------->MYB46(3)                            --------->YAB1      --         --------->ANAC58     <---------WRKY12 ----------->GT1                =======================   <---------At5g28300 <-----------GT1 <---------ANAC46                       <------ZmHOX2a(2)    == ----------->HVH21 --------->AHL20(2) <---------LBD16                     <---------TOE1(2)  <-------   tcagtgaccgtgagcaacgaattattttcagttcaacgactccgcggaaatggaaaattcagaaaatgttccctcttacgatcaaaacatcaatttcact  8791900                                                               <-----------HVH21                                                              --------->O2                                                              --------->TGA1a                                                              <---------TGA1a                                                  --------->ANAC58          --------->ANAC58                             --------->YAB1       --------->ANAC55(1)  ----------->HVH21                             <---------ICU4       --------->ANAC58  <---------DEAR3(1)              <                            --------->ICU4        ----------->GT1<---------DEAR3(1)                 -              <------ZmHOX2a(2)                   --------->ANAC46 <------NtERF2                    < ---->ZmHOX2a(1)            <---------YAB1        <---------ANAC55(2)--------->At4g35610            - =====HOX2a_HOX2a     --------->TOE1(2)           --------->ANAC55(2)<---------At4g35610        ----- ====================HOX2a_HOX2a         ===============================bZIP_DOF                <---- ----GT1     --------->ARR11(3)          <----------DOF2      <---------O2  --------->ANAC58    <----   cctaatttgacgagagatcaagaacatgtgatcatggtctctgctttgcaacaagtaatatccaacgtcggaggtgacacgaactcgaatgcatgggaag  8792000                                                                            <---------O2                                                                            <---------TGA1a                                                                            --------->O2                                                                            --------->TGA1a                                                                       <---------O2                                                                       --------->TGA1a                                                                       --------->O2  <---------ICU4                                                             <---------ANAC55(1)     <--------HAHB4                                                             --------->ANAC55(2)    <---------ATHB51                                                             <---------ANAC46       <---------YAB1                                                         ========================MYC_MYB                                                         <-------GAMYB --------->ANAC58      <---------ALFIN1                        --------->DEAR3(1)       ==============================  ====================================HOX2a_HOX2a  <---------ZAT2      --------->bZIP60(2)  ------>ZmHOX2a(2)                          <---------LBD16 <---------ANAC58       --------->ICU4 ---------ARR14(2)                           <---------At4g35610       --------->ANAC58 -------->ARR14(2)                       <-----------HVH21   <---------ANAC58    ----------->GT1 ---------ARR11(3)                      <---------ZAT6   =============================MYC_MYB -------->ARR11(3)               <----------DOF2   --------->At4g35610 ----------->HVH21 ---->At4g35610                ------>ZmHOX2a(1)   <---------At4g35610 --------->ANAC46 -----ZAT2                  ---------->ID1 <-----------GT1<---------MYB52(1)========================= -----At4g35610     ------>NtERF2================================================bZIP_DOF      <-----   ctgatcttccacctttgaacgctggcccttgtcctctttgtagtgtcaccggctgctacggttgcgtcttcccacgacacgaggcgataattaagaagga  8792100                  <------ZmHOX2a(1)                 ----------->GT1                                   <---------HSFB2a(2)       ---------->DOF2           <--------P            <----------DOF2          <---------ZAT6 =================bZIP_DOF   <-----------RAV1(2)    --------->ANAC58       <---------STY1(2) =================bZIP_DOF <-----------HVH21 <---------YAB1        --------->HSFB2a(2) -ZmHOX2a(1)  --------->ALFIN1 <---------ANAC55(2)  --------->ANAC58       --------->STY1(2) ------->TEIL   gaagaagcacaaaggagtgaggaaaaaaccatcaggtaagttctattctaatacaagctttgagtttttctagtactagctagttttagttcatgtattt  8792200                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                  ---                                                                                                -----                                                                                               <-----                                                                                              <------NtERF2                                                                                              <------                                                                                              <------                                                                                              -------                                                                                              <------                                                                                              -------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             ------>NtERF2                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                             <---------------AtSPL8         <--------                                                             <---------------AtSPL3         <--------                ------->PIF5                                 --------------->AtSPL3         <--------                <-------PIF5                                 --------------->AtSPL8         <--------               --------->TGA1a                           <-------GAMYB                      <--------          --------->ANAC58                               <---------At4g35610                <--------          --------->ANAC46                     <---------MYB52(1)                 <---------ANAC55(2)          --------->ANAC58                     --------->DOF5.7(2)              <-----------RAV1(2) <    --------->AHL20(2)                        --------->TOE2(3)       --------->YAB1       <---------ABI4(1)    <---------AHL20(2)                        --------->TOE1(3)    <----------DOF2----------->GT1<---  --------->AHL20(2)      ----------->GT1    <---------ANAC55(2) ------->TEIL <-----------HVH21<-----   tcatatatatataagccacgagcccatgaggtaaactatgttccaatacgttagcatgcagttgatgtactttcataaaccatcaggtaaatgggcggcg  8792300         ------>ZmHOX2a(2)        <------ZmHOX2a(2)        =========================HOX2a_HOX2a                                           --------->ATERF1(1)       <---------ARR14(2)                                                              ============== --------->CCA1(2)                                                                     --------->At4g35610 ---------ARR11(3)                                                                     <------NtERF2 -------->ARR11(1)                                                                     <---------At4g35610 -------->ARR11(3)                                                                     <---------ZAT2 -------->ARR14(2)                                                                     <-------GAMYB -------->ARR10                                                                        --------->ZAT2 ---->LBD16                                                    --------->At4g35610    <---------RAP2.3(1) ----ANAC46                                                    <---------At4g35610    <---------DEAR3(2) ---LBD16========================HOX2a_HOX2a                  <---------RAP2.3(1)     <---------ERF1 ---ABI4(1)                                                   <---------ERF1          ------>NtERF2 -->ATERF1(1)                                                 ------>NtERF2          <---------ANAC46 ---At4g35610                                                 <<<<<<<<<AtERF-3       <---------RAP2.3(3) -->At4g35610                                                 <<<<<<<<<AtERF-4       <---------RAP2.3(2) --RRTF1(1)                                                   <<<<<<<<<AtERF-1       <---------DEAR3(1) --ATERF1(1)                                                  <<<<<<<<<AtERF-5       <---------ATERF1(2) --RAP2.3(1)                                                  <<<<<<<<<AtERF-2       <---------RAP2.6(2) --DEAR4(2)                                                  <---------DEAR3(1)      --------->ATERF1(2) --ERF1--------->ARR14(2)                                    <---------ANAC46       ------>NtERF2 --ORA47(2)                                                  <---------RAP2.6(2)    <---------At4g35610 -DEAR3(1)                                                   <---------RAP2.3(2)   <---------RRTF1(1) -RAP2.3(2)                                               --------->ALFIN1         <---------DEAR4(2) >ATERF1(2)                                            <---------ARR14(2)          <---------RAP2.3(1) -RRTF1(3)                                           --------->LBD16               <---------ATERF1(1) -RRTF1(2)                                         <---------LBD16                <---------RAP2.3(2) -DREB2C(2)                                        --------->At4g35610<---------ANAC58<---------ATERF1(1) -RAP2.6(2)                             <---------HSFB2a(1)  <---------RAP2.3(3)  <---------RRTF1(2) -RAP2.3(3)                             --------->HSFB2a(1) --------->RAP2.6(3)   <---------RAP2.6(2) -ATERF1(2)                      <---------ANAC46  <---------At4g35610<---------ANAC58<---------MYB46(3) ---------ARR14(2)               <---------ANAC58 ------->GAMYB<------NtERF2      <---------DEAR3(1) ---NtERF2 --------->LBD16<------ZmHOX2a(1)    ----------->RAV1(1) <---------TOE1(3)--------->ATERF1(1) ----DEAR3(1)     ---------->DOF2<---------ANAC58--------->MYB46(3)<---------TOE2(3)<------NtERF2 ---   gagatatgggatccgagtttgaaagtaaggagatggcttggaacgtttccaacagcggagatggcggctaaggcttacaacgatgcggcggctgagtttg  8792400  Previous    Next  AGI:  At2g20350.1    Description:  AP2 domain-containing transcription factor, putative. Identical to Ethylene-responsive transcription factor ERF120 (ERF120) [Arabidopsis Thaliana] (GB:Q9SK67); similar to AP2 domain-containing transcription factor, putative [Arabidopsis thaliana] (TAIR:AT5G67010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47807.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 8791850    to: 8792477    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version