Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <---------At5g28300                                                      <----                      <-----------GT1                                                     <---------MYB46(3)                     <---------YAB1                                                       <---------DEAR3(2)                   <---------ICU4                                                        <---------DEAR3(1)                   --------->YAB1                                                       <---------ORA47(1)                  <---------YAB1                                                       ------------>AtMYB77                <---------AHL20(2)                  --------->ANAC58                  --------->ZAT18               --------->AHL20(2)           ----------->GT1                          --------->ALFIN1               <---------AHL20(2)      --------->ATHB12--------->MYB52(1) <---------ARR14(2)   <-----            <---------AHL20(2)        <-------TEIL  --------->ANAC58      --------->GLK1(2)<-------GAMYB           <---------YAB1         <---------YAB1    --------->ANAC46      --------->ARR14(2)   <-----   ttgattcaaaatttttatttattattaccgtagttgatgattcatagggtttaaacgcaacgagttcaattgtgagaatatggagaagtggacggttgcg  8786400                                                      <---------YAB1                                                     <---------AHL20(2)                                                     --------->AHL20(2)                                                    --------->YAB1                                                   <---------YAB1                                                 --------->YAB1                                                 <---------ICU4                                                 --------->ATHB51                                                 <---------AHL20(2)                                                 -------->HAHB4                                                 <--------HAHB4                                                 -------->ATHB1                                                --------->ICU4                                     --                                                <---------ATHB51                                   <-                                              <---------ICU4                                     <---                                ----------->GT1 <---------YAB1                                 ------                              <---------YAB1  --------->YAB1                                   <-----                            --------->YAB1   --------->AHL20(2)                              --------     --------->LBD16        <---------ICU4   <---------AHL20(2)                             ---------    <---------ANAC46        --------->ATHB12 <---------ATHB51                               <-------- -----ZAT18                --------->ICU4  --------->YAB1                                   <-------- ----ANAC58               <---------WOX13(1) --------->ICU4                               ------->TEIL ----ANAC58            <---------YAB1   --------->TOE2(3)          ---------->DOF2--------->YAB1 ----   aacttgccgtagactatcaagtgttttgaatgattagtaaaacataaataattattaaaattgagagattaaagtgtttgacaattaacatgaatatata  8786500       <---------AHL20(2)     <---------AHL20(2)     --------->AHL20(2)       <-------MYC3   <---------AHL20(2)         ------->MYC3   --------->AHL20(2)        --------->O2 --------->AHL20(2)          <---------O2 <---------AHL20(2)          <---------ANAC55(2) ------->AHL20(2)            <---------TGA1a --------AHL20(2)            --------->TGA1a ------AHL20(2)              --------->ANAC46       ---------->TaMYB80 --->AHL20(2)           <---------At4g35610         <---------KAN4(2) ----AHL20(2)    <---------AHL20(1)            <---------LBD16 ->AHL20(2)      <---------AHL20(2)           <---------LBD16 >ARR11(3)       --------->AHL20(1)          <---------LBD16          ---------->DOF2 -AHL20(1)       --------->AHL20(2)       <-----------GT1 --------->TOE1(3) -ARR11(3)    ------->TEIL   --------->ANAC55(2)--------->LBD16    --------->TOE2(3) ----->AHL20(2) --------->AHL20(2)  <---------AHL20(2)    --------->TOE2(3)             --------->AHL20(2)   tatatatatatatatgaattttattttgctcacgtgatttttttttactcggggaataaaccttaacaatctcaaagtaatttgaaacaatataaaacgt  8786600                                                                                   <---------ICU4                                                                                  --------->AHL20(2)                                                                            <---------ARR14(2)        <---------WOX13(1)                                                  --------->ARR14(2)      --------->ATHB12          <------ZmHOX2a(1)                         <---------MYB46(3)       <-      -------->HAHB4         <-----------RAV1(2)                       <---------ANAC58         -----     <---------ATHB12   --------->GLK1(2)<---------ATHB12              <---------ANAC46        <-----     <---------YAB1     --------->ARR14(2)                             <---------ANAC58        <-----     --------->ICU4     <---------ARR14(2)                --------->YAB1  ----------->GT1<---------LBD16 --------->AHL20(2)     --------->ARR11(3)            --------->ATHB12<---------MYB46(3)----------->RAV1(2) <---------AHL20(2)     <---------ARR11(3)           <---------YAB1   <-----------------------TaNAC69(2)   tttttaaatgattgattttaaaccaaaatctgcaggagaaccaataagttgtatagttattgataaacgaattgggtggatacaataaatacctggagat  8786700                                                         <---------AHL20(2)                                                         --------->AHL20(2)                   --------->AHL20(2)               <---------AHL20(2)                   ----------->TBP          --------->AHL20(1)           --------->AHL20(2)               <---------AHL20(1)           <---------AHL20(2)               --------->AHL20(2)       --------->AHL20(2)      <------------CBF--------->AHL20(2)                         <---------GLK1(1)       <---------AHL20(2)    --------->AHL20(2)<---------AHL20(2)        --------->ZAT18  --------->CCA1(2)     --------->TOE2(3)       <---------AHL20(2)<---------AHL20(1)        <---------ZAT18  --------->GLK1(1) ---------DOF2    --------->AHL20(1)      --------->ARR11(3)             <---------PCF2  <---------ARR11(3) ---->GLK1(2)     <---------AHL20(1)      <---------ARR11(3)      <------------CBF       --------->ARR11(3) ----ARR14(2)    --------->AHL20(2)       <---------AHL20(1)  --------->YAB1   ----------->TBP<------ ----GLK1(2)   --------->AHL20(2)         --------->AHL20(1) --------->AHL20(2)--------->AHL20(2)   <   tctttttcattaattaaaaatatatatacaaaaaattgactaaaaatattttattttaaaaaaataaaaattgagggccctataaataagagatatccac  8786800                                                                           ----------->GT1                                                                           --------->ANAC58                                 ----------->RAV1(2)                       --------->ANAC58                              <---------At4g35610                        ---------->DOF2                   <---------ATHB12                                  ---------->DOF2                 --------->WOX13(1)                               --------->ANAC58               ------------>CBF  --------->At4g35610              --------->ANAC46         --------->TOE2(3)   --------->ARR11(3)               --------->ANAC58         --------->TOE1(3)   <---------ARR11(3)               --------->ANAC46               <------- ---ALFIN1     <---------ATHB12 --------->GLK1(2)             --------->ANAC58               -------- ---------ALFIN1*TSS--------->YAB1             --------->TOE2(3)  --------->ANAC58    --------->ANAC46   tcccactgaaacctcaaatcaatcagagagagagcttctgagacataaacatcaattcaaatcgacgcaagcaaagaaagcaaaatgtaagtcactgaag  8786900                                                                               <---------REM1(1)                                                                            --------->ALFIN1                                                                          <------MYB83     <---------GLK1(1)                                 --------->LBD16    <------MYB46(1)     --------->GLK1(1)                           <---------------AGL15   <---------AtMYB61 --ZAT14                                         --------------->AGL15  <--------P ->ZAT14 ----------------->AGL1               <-----------GT1       <---------ANAC46   agtttggaattcccatttctgttcaattttcaattgagtttttgtgtttttctcttcagggaaaatggaagcgggaaggtgttgaagccgatggactcag  8787000                           <---------WOX13(1)                           <--------P                        <---------YAB1                     ----------->HVH21                          --------->GLK1(1)                   --------->At4g35610                          <---------GLK1(1)                   <---------At4g35610                         <---------ARR11(3)            --------->SPL7<-------GAMYB                        --------->ARR14(2)          <---------SPL7<---------AtMYB61                      --------->ARR11(3)          <---------ZAT14<---------MYB46(3)                    <---------ARR14(2)        <---------------AtSPL8          <---------YAB1        --------->HSFB2a(1)           <--------        <---------------AtSPL3    --------->ATHB12    --------->MYB46(3)                 --------->ARR11(3)   agcaattgagagagtacggacatctgatggttgatttcattgctgattactacaaaaccatcgaagatttccctgttcttagccaagttcaggtcttttt  8787100                                                                                           <---------ANAC58                                                                                           <---------ANAC58                                                                                           <---------ANAC46                                                                                     <---------TOE1(3)                                                                                --------->MYB52(2)                                                                            <---------ANAC58                                                     --------->YAB1         <------MYB83   ----------                                                   <---------ANAC55(2)      <------MYB46(1)<---------ANAC55(2)                                                   <---------ANAC46         <---------ANAC46                         <---------YAB1           --------->MYB52(2)        <---------ANAC58     <---                         <---------TOE2(3)      <---------MYB52(1)         --------->MYB59 --------->ANAC55(2)                         <---------TOE1(3)      <<<<<<<<<MYB98     <---------YAB1    <---------TOE2(3)                    <------MYB83          --------->WOX13(1)   <---------ARR14(2)   ---------->DOF2 --DOF2             <------MYB46(1)    <-----------GT1         <---------GLK1(2)<---------MYB46(3)   ctgttttctgagacaatcgatttggttatggtttatgggtttttcaatccgttacttataacttggattctgagagttgggtttgttaaagtttcgtaat  8787200                                                                     ------>MYB46(1)                          ------>MYB83                               ------>MYB83                          ------>MYB46(1)                        <-----------------AGL1                        <---------MYB59                    --------->TOE2(3)                     <---------ZAT18---------->DOF2       <---------ZAT6               <----------DOF2 ->GT1              ----------->HVH21                     ----------->GT1           <---------ARR11(3) ------AHL20(2)<-----------HVH21 <-----------HVH21       <---------TOE2(3)    --------->ZAT6   ttatagctccgaactgttgtcagtgacctaatttctgtcaaagttgctgtttttttgctaatgttaaaaccaaattggcaactctagttctttgtacttg  8787300  Previous    Next  AGI:  At2g20340.1    Description:  tyrosine decarboxylase, putative. Identical to Tyrosine decarboxylase 1 (ELI5) [Arabidopsis Thaliana] (GB:Q8RY79;GB:Q9SK68;GB:Q9SMY2;GB:Q9SMY3); similar to tyrosine decarboxylase, putative [Arabidopsis thaliana] (TAIR:AT4G28680.2); similar to tyrosine decarboxylase, putative [Arabidopsis thaliana] (TAIR:AT4G28680.1); similar to hypothetical protein OsJ_023093 [Oryza sativa (japonica cultivar-group)] (GB:EAZ39610.1); similar to Os07g0437500 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059509.1); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424); contains InterPro domain Pyridoxal phosp Range:  from: 8786816    to: 8789853    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version