Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          ------>ZmHOX2a(2)                  ------>NtERF2                  --------->LBD16                  <---------ATERF1(1)                 --------->DEAR3(1)                 <---------ATERF1(2)                 --------->ATERF1(2)                 <---------DEAR3(1)                --------->ATERF1(1)              --------->TGA1a          <---------ANAC58              <---------TGA1a          --------->ATERF1(1)              --------->ANAC58         <---------ANAC58              --------->O2           --------->ALFIN1              <---------O2        <-----------RAV1(1)                       <---------YAB1              --------->ANAC58    <---------MYB46(3)                      --------->YAB1              --------->ANAC46    --------->ALFIN1                        <---------ICU4          <-----------HVH21     --------->ZAT2                           <---------ATHB12       --------->ANAC55(2)      ----------->RAV1(2)                 --------->ANAC55(1)       --------->O2    <------ZmHOX2a(2)                            --------->ANAC55(2)       <---------O2<------NtERF2<---------ZAT2                      --------->ANAC58       <---------TGA1a<---------ARR11(3)                            <---------ANAC55(2)       <---------ANAC55(2)      <---------At4g35610           <---------WOX13(1)                <----   <-----------HVH21  --------->ARR11(3) ------>NtERF2<------NtERF2 --------->ANAC58           <----- ---------->AGL1<---------LBD16 --------->At4g35610 <---------DEAR3(1)   --------->ICU4     <--------   attgttgtcacttgtcacgccggcgatcttaaacagctggtgcgggccaaagagtcggagcgtaattgacaagtaatcatgcttaaaaactttcccacct  8727500                                                          <---------At4g35610                                                    <----------DOF2                                                 <---------AHL20(2)       <----------DOF2                       <---------ICU4                                        <- <-----------GT1           --------->ZAT6    --------->ATHB12                                    ---- ------DOF2                <-----------GT1   --------->YAB1                                    ------ ----DAG2             <---------ANAC58       <--------HAHB4        ---------->DOF2      --------->MYB59 -ALFIN1              <---------ANAC58      <---------ATHB12<---------YAB1    <---------YAB1   ------   ttttttcttcttttacttctatgtgcttatcacttcccaaaatacaatcatttactttgatgctgattacaaagtcacttacaattggattaggcaataa  8727600                                                                          --------->DAG2           --------->YAB1                                             ----------->GT1       <---------AHL20(2)                                   <------MYB46(1) ---------ID1                                               <---------ANAC55(2) ------>DOF2      ---------->DOF2                           --------->ANAC55(2)        <---------YAB1 --->YAB1 <---------YAB1                     ----------->ARR10----------->HVH21  <---------YAB1   --- --->AHL20(2)    --------->AHL20(2)  --------->MYB52(1)     <------MYB83 ---------->DOF2  ------>ZmHOX2a(1)   aaagacaaatttatgaaaataaaagaattaagactctactaacagattagatttgaatcgataggtgacagagggtaaagtttatgtttatcctagactc  8727700                                                                                                  <--                                                                                                 ----                                                                                                 <---                                                                                                -----                                                                                                <----                                                                                                -----                                                                                               <-----                                                           ---------->DOF2                   --------                                                   --------->YAB1                            <-------                                             ------>ZmHOX2a(1)                              <--------                                           ----------------->AGL1                           ---------          ------>MYB46(1)            <---------ZAT18      --------->AHL20(2)                ---------          ------>MYB83               --------->ZAT18      <---------AHL20(2)                <--------        <---------MYB59              <---------ZAT14  <---------AHL20(2)               --------->At5g28300        <---------MYB46(2)           --------->ZAT14  --------->AHL20(2)              ----------->GT1 <-----------GT1                <---------YAB1    ----------->GT1                <---------WRKY12<--- ------>YAB1    --------->YAB1--------->CCA1(2) --------->YAB1                   <---------WRKY38(1)   taataacataccaaactagcatattcaacatgatatgagtgaacttcctatattgataaattaaagtcaaacaatatttgtggtcaaatggtaaataatt  8727800        --------------->AGL15    <----------DOF2     ------------>CBF -------YAB1        <---------At4g35610 ----->AHL20(1)     --------->O2 ------AHL20(1)     --------->At4g35610 ---->YAB1          --------->bZIP60(2) -----AHL20(2)    <---------WRKY38(1) ---->AHL20(2)   <<<<<<<<<<WRKY38 ----YAB1        <<<<<<<<<<WRKY43 ->YAB1<-----------------AGL1 --ICU4<-----------------AGL2 -AHL20(2)       <<<<<<<<<<WRKY26           <---------YAB1 >ICU4 <-----------------AGL3           <------------CBF >AHL20(2)  <------------CBF       <---------YAB1                      <---------YAB1 -ATHB51<---------------AGL15  <----------DOF2                         *TSS               ----------- ------AHL20(2) <-----------HVH21  ----------->TBP            ---------->DOF2 <---------YAB1   atatttctttctgaaattggtcacctcacaattctttataaatattgttataggtctaacaaataaaagcactattagtgatttttgtttatgtgttaaa  8727900               <---------AHL20(1)                                                  ------------------               <---------AHL20(2)                                                  <---------ANAC58               --------->AHL20(1)                                                  <---------ANAC46               --------->AHL20(2)                                                  <---------ANAC58         ----------->GT1                                                      --------->At4g35610       <---------MYB52(1)        ---------->DOF2            <---------ALFIN1--------->YAB1<---------YAB1      <<<<<<<<<<AtWER         --------->ANAC58       <---------At4g35610   <---------ATHB12 >GT1<---------ZAT6           --------->ANAC58---------->DOF2            --------->WOX13(1)   aggtttactgttagtaaaatattaagagaaggaagcaaagaaatatggcaaaggcatcttctacacttgttctctcaatcatcttccttgttatgtttgc  8728000                                                                     --------->ANAC58               <                                               --------->ARR14(2)    --------->ANAC58         <------                                        <---------At5g28300          <---------ANAC46         <------                                      --------->WRKY12               --------->ANAC55(2)  --------->ARR11(3)                                  <---------LBD16  ------>ZmHOX2a(1) <---------ANAC55(2)  <---------ARR11(3) --->WRI1                   <----------TaMYB80 <---------ARR14(2)   <---------TOE1(2)   <---------TOE1(3)   cttaggtatacatttctctctattcttgtcatattccccgcttaccgtagttcctcgataacatttgtctcacgtatacatttacatcttaaggtctaca  8728100    <---------KAN4(2)                                                          <---------REM1(1)  <------ZmHOX2a(1)                                           --------->AHL20(2) ---------TOE2(3)<-----------HVH21                     <---------REM1(1)    <---------MYB46(3) ---REM1(2)     <----------DOF2                     <-----------RAV1(1) <-----------RAV1(1)   ------- ---ZAT14  ---------->DOF2               <-----------GT1      <---------AHL20(2)         <-----------   cttaggaattttcaaaagctttcacatatatagtgtctaggtataacatctcaaatgttgtagtttaaatggttttgttggatgtagttgagcaaaatat  8728200                                                             <-------TEIL             --------->At4g35610                              <----------ID1        --------->AtLEC2                  <---------At4g35610                              ----------->GT1      <-------MYC2                     <---------ANAC58                           ---------->DOF2         ------->MYC2                     <---------ANAC58                      --------->AtLEC2   <---------ZAT14 <-----------ARR10     --------->MYB52(1)                    <XXXXXXXXXXXXXXXXXXXXMIR4239   <-------MYC3         --------->CCA1(2) -->CCA1(2)      <---------PCF5    ---------->DOF2 ------->MYC3        <---------ARR14(2)      ------ ------AGL3      <---------PCF2<------ZmHOX2a(1)----------->RAV1(1)    --------->ARR14(2)      <-----   gggatgcacagcgactatgggaccatgcgaaaaggataaaagctgtagtgccacatgcagagctacgtttggagatagggctaatggcttctgcgactac  8728300                                                        ------>NtERF2                                                     <---------ANAC58                                <---------ANAC46     <---------ANAC58                                <---------ANAC58    --------->ALFIN1                             <---                            <---------ANAC58        <---------AtMYB61                        --------                            <---------ANAC58        <-----------RAV1(1)                      <-------                           ------->TEIL         ================RAV                          --------                       <---------KAN4(2)       ------>NtERF2     ------->TEIL                <------- --->ZAT14       <---------ANAC46              <------NtERF2  <---------YAB1         <----------DOF2 ----ZAT14    ------>ZmHOX2a(1) <---------ANAC58----------->RAV1(2)           --------->GLK1(1) <----   agtactagtactagtcctggtggagaatgtacttgcgtctaccattgtccgcctgtggtgcctcatgaatcccatttgtgatttctactttgaaatattt  8728400  Previous    Next  AGI:  At2g20208.1    Description:  LCR60 (Low-molecular-weight cysteine-rich 60). Identical to Putative low-molecular-weight cysteine-rich protein LCR60 precursor (LCR60) [Arabidopsis Thaliana] (GB:P82774); similar to LCR61 (Low-molecular-weight cysteine-rich 61) [Arabidopsis thaliana] (TAIR:AT4G30064.1) Range:  from: 8727871    to: 8728504    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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