Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              ----------->GT1                                       ===                                           <---------TOE1(3)                                      <--                                  ------->GAMYB      <---------WOX13(1)                           <--    ---------->DOF2              --------->ANAC58  <---------AHL20(2)                             --- ------->ICU4                    --------->ANAC46  --------->ATHB12                      <<<<<<<<<TBF1 ------>DOF2                     --------->ANAC58 --------->AHL20(2)              --------->ARR11(3)- --WRKY45                      --------->MYB52(1) <---------AHL20(2)              <---------ARR11(3)< --WRKY12                     <---------WRKY38(1)<---------YAB1                 ----------->ARR10 --- --WRKY38(1)      <------ZmHOX2a(2)        <---------TOE2(3)                 <---------ANAC58   <---- >WRKY18(1)      <---------ARR11(3)    <----------DOF2  ---------->DOF2      <---------ANAC58  ------   aaagattaaagaacatcgagatcaacacttagacaacggaactttagggttattaattgaaagcccattcgttcttcttgcgaagctcttcttcttcctc  8706800 ===============================bZIP_DOF   <---------At5g28300 -------ZAT2                      <-----------ARR10 -------TGA1a                     ------->TEIL ------>TGA1a                 --------->HSFC1(1)                --------->At4g35610     --------->GLK1(2) -------->ALFIN1              <---------HSFB2a(2)           --------->ZAT14            <---------GLK1(2) ---------ANAC46              --------->HSFB2a(2)          <---------ZAT6           --------->YAB1 ------>ZAT2 <---------HSFB2a(2) <---------CCA1(2)     --------->ZAT14    <---------ANAC58 -------RAV1(2)      ---------->DOF2      <-----------GT1<---------ANAC46 <---------ANAC58 >ZmHOX2a(1) --------->HSFB2a(2) <---------GLK1(2)     <---------ZAT14    <---------ANAC46   aggtgtgtaatcgttctcgatgttaaagagttctcgaatctcatttaccgtcttatctgcagtgtaatctgcaatggcctgggcaatgagattcttgaga  8706900                                                                                     --------->ANAC58                                                                                     --------->ANAC58                                                                                 <-----------HVH21                                                                                --------->ANAC58                                                                                --------->ANAC46                                                                          <-----------HVH21                       <-----------HVH21                                 <---------ANAC58                     --------->At4g35610                                 <---------ANAC58                  <---------ZAT2            ------->TEIL        --------->ANAC46--------->ANAC58  --------->YAB1  --------->ZAT2            --------->ARR14(2)  --------->ANAC58--------->O2 <------- ----------->HVH21<---------At4g35610       <---------ARR14(2)  --------->ANAC58--------->bZIP60(2) ----------->TGA1 --------->At4g35610      <---------CCA1(2)  <-----------GT1   --------->TGA1a   cctatgacgatgagatagtcagcagcgtcaaggagtttgaagagtgtatccatatcaatgtttttcacgaactctgcgtcccaagtcacgaactcattct  8707000                                                               <---------ANAC58                                                    ------>ZmHOX2a(2)                                                    --------->HSFB2a(1)                                                  --------->ARR14(2)                                                  <---------ARR11(3)                                                  --------->ARR11(3)                                                  --------->GLK1(2)                                                  --------->ARR14(3)                                                  <-----------ARR10                                                  <---------ARR14(3)                        <------NtERF2                                                  <---------ARR14(2)                       ------>NtERF2                                                 <------ZmHOX2a(1)                         <---------ZAT18                                             <---------ANAC46  <---------ANAC58   <----------DOF2                                        --------->ATHB12       <---------bZIP60(2)<---------DAG2                                        --------->YAB1         <---------ANAC46  <---------ANAC58                      <---------ANAC58  <---------ICU4        <-----------------------TaNAC69(2) <---                      <---------ANAC46  -------->HAHB4      ----------->HVH21    <---------ANAC58<---                   <---------CCA1(2)   --------->ICU4       ----------->TGA1  <---------WOX13(1)-----                <-------MYC3         <---------ICU4 <---------HSFB2a(1)    --------->LBD16--------->ANAC46   --------->REM1(1)  <---------ANAC58 <---------YAB1<----------DOF2      --------->RAP2.6(2)  <----- --YAB1         ------->MYC3         --------->YAB1<------ZmHOX2a(2)     <---------LBD16 --------->RAP2.3(1)   tggcttcaacatcatcaacgtgtttcttgcaatactcgataatgatagcgaggatctttccagtgacgttttgaagccggattgctttatcggcgcaatc  8707100                                      <------NtERF2                                    <---------ALFIN1                                    --------->DEAR3(1)                                   --------->MYB46(3)                    ----------->RAV1(2)<---------ALFIN1             <---------At4g35610   <---------MYB55(2)            --------->ANAC46     --------->ANAC58         <-------MYC3            --------->ANAC58                --------->ATHB12         ------->MYC3          <---------ANAC58                  <---------ICU4     <------ZmHOX2a(2)   ------->TEIL------>NtERF2              <---------YAB1 --------HVH21      --------->At4g35610--------->DEAR3(1)    <-------TEIL     <---------WRKY38(1) --------TGA1--------->At4g35610 --------->ANAC46  --------->TOE2(3)    <---------ZAT2 ---->YAB1 <---------ZAT18     <---------ANAC58 --------->WOX13(1) --------->At4g35610            <-- ----ATHB12--------->ZAT18<---------At4g35610--------->TOE2(3)--------->YAB1  <---------WRKY45    ---   gtcatcgatcatgtgcgctaccatctgcatcttacgagccaccgcttcgtcaatctcaaaacattcatcatcggagctagtcaacacaatcttcttcgaa  8707200                                                    <---------HSFB2a(2)                                              <---------ARR11(3)                                              --------->ARR11(3)                                             <---------GLK1(1)                                             --------->RVE1(1)                                             --------->GLK1(1)                                             --------->CCA1(1)                                             <---------CCA1(1)                                             <---------RVE1(1)               <---------ANAC58             --------->ARR11(3)           <------------CBF               <---------ANAC58    --------->ARR11(3)       <------------CBF    <---------YAB1                 <---------ARR11(3)     --------->ARR11(3) -------ARR11(3)       <---------TOE2(3)    <---------ARR11(3)----------->GT1        <-----------RAV1(2) ------>ARR11(3)   <----------DOF2 <---------GLK1(2)--------->HSFB2a(2)<---------AHL20(2)   ---------   gacattttgtttgttttgctggtttaacgaagagcaagatttttgagatatcttatggaagaaattgttatatgaaattgatgagtctcaggctatgcaa  8707300                                                                                    ------>ZmHOX2a(1)                                                              --------->AHL20(1)    --------------->AGL15                                                              <---------AHL20(1)    <---------------AGL15                                                              --------->AHL20(2)   <---------------AGL15                                                    --------->AHL20(2)             --------------->AGL15                                                   <---------AHL20(1)              --------->TOE2(3)                                        <------------CBF      <---------ARR11(3)   ----------------->AG                                       --------->ATHB51       <---------AHL20(2)   ----------------->AGL2                                      <---------AHL20(2)      --------->ARR11(3)   <-----------------AG                                      <---------YAB1----------->TBP<-----------GT1 <-----------------AGL3           --------->YAB1   <-----------HVH21      --------->AHL20(1)  ------>ZmHOX2a(1) --------->MYB52(1)          <---------YAB1   ----------->GT1        --------->AHL20(2)<-----------GT1<-----------------AGL1      <-----------TBP      <---------bZIP60(1)<------ZmHOX2a(1)<---------AHL20(2)  <-----------------AGL2    <----------DOF2       --------->MYB59   <---------TOE2(3)--------->AHL20(2)    ----------------->AGL3 >AtLEC2--------->YAB1    <XXXXXXXXXXXXXXXXXXXXMIR1886.3 --------->AHL20(2)<----------DOF2         --   gtctctctttttataatgagttgagagtgaggtcaaatctataattgaggaaatatatataaaatatattttcctctctttttttcctaaataagggaag  8707400                                       --------->MYB59                                  <---------AHL20(1)                                  --------->AHL20(1)             --------->YAB1       <---------AHL20(2)         --------->AHL20(2)       --------->AHL20(2)       ----------->GT1        --------->AHL20(2)                                                 ----      --------->DAG2         ------------>CBF                                                    ----     ---------->DOF2         <---------ATHB12            --------->AHL20(2) --------->ANAC46     <--- --------->ANAC58         ------>ZmHOX2a(1)            <----------DOF2   --------->ARR14(2)      <--- --------->ANAC58     <---------ARR11(3)      <---------CCA1(2)  ----------->HVH21          --------- -------->DOF2  <-----------GT1--------->WOX13(1)  <---------CCA1(2)     <---------ARR14(2) ---------   agaaagcaaaagtaaatataacaaaatcctaatcaattaattaggctcttatcttatcttttaatatttgacccatatactacacatatgctaataaaaa  8707500                                                                                                   <-                                                                                             --------                                                                                           --------->TOE2(3)                                                                                          --------->YAB1                                                                                        ------>MYB83                                                                   <---------AHL20(1)   --------->MYB52(1)                                                                   --------->ARR11(3)   ------>MYB46(1)           <---------AHL20(2)                      <---------ARR11(3)                  --------->MYB55(1)        --------->ARR11(3)                         --------->ARR11(3)                 <---------MYB46(2)  --------->YAB1                                --------------->AGL15                 <---------MYB111(2) <-------TEIL                                   <---------------AGL15                 <---------MYB52(2) ----->AHL20(1)                                ----------------->AGL3                 <---------MYB111(1) ----->ARR11(3)                              <<<<<<<<<GT-1         --------->AHL20(1) <---------MYB59 ------AHL20(1)         --------->YAB1  <---------AHL20(1)      <---------AHL20(2)   --------->ANAC46 ------ARR11(3)         --------->TOE2(3)    <-----------GT1    --------->AHL20(2)   --------->ANAC55(2) >AHL20(2)--------->AHL20(2)            --------->AHL20(1)  <---------YAB1           <---------At4g35610 >YAB1  <---------ARR11(3)           --------->AHL20(2)----------->GT1             <-----------GT1<--   atattcatgagattttatagatgctatcttaatattcaaaaaaatattaaccatatattgttatatttatatattggattcagtttcacctaacataaat  8707600                                                                                        -------------                                                             --------->YAB1 -------->HAHB4                                                 <---------ICU4             --------->ATHB51                                                --------->AHL20(2)          <---------ICU4                                 --------->YAB1 <---------AHL20(2)          <--------ATHB1                                 <---------AHL20(2)   --------->At4g35610  --------->AHL20(2)   -----                          <-----------GT1       <---------ATHB51           <---------AHL20(2)  ------       <---------ANAC46<---------ARR11(3)       --------->ICU4             <---------ATHB51  -------- --------YAB1          --------->ARR11(3)      <---------AHL20(1)        --------->YAB1-------------- ->AHL20(2)            <---------GLK1(2)      --------->YAB1----------->HVH21          ============== ---------GT1        ----------->ARR10      --------->AHL20(2)         --------->ICU4<-----------GT1   tttcattttgggtataatatagtgagattttctatttataagtttttaaaataattagctctatgacaatgtcataaataattgttttcaccaaaaaaag  8707700  Previous    Next  AGI:  At2g20160.1    Description:  MEO (MEIDOS); ubiquitin-protein ligase. similar to ASK16 (ARABIDOPSIS SKP1-LIKE 16), ubiquitin-protein ligase [Arabidopsis thaliana] (TAIR:AT2G03190.1); similar to kinetochore protein [Brassica juncea] (GB:BAB85603.1); contains InterPro domain SKP1 component, POZ; (InterPro:IPR016073); contains InterPro domain SKP1 component; (InterPro:IPR001232); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain E3 ubiquitin ligase, SCF complex, Skp subunit (InterPro:IPR016897); contains InterPro domain SKP1 component, dimerisation; (InterPro:IPR016072) Range:  from: 8706753    to: 8707205    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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