Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <-----------GT1 <---------AHL20(2)               <---------ICU4                        <----------DOF2 --------RVE1(1)                  --------->ATHB51                     <---------ANAC58 ------>ARR11(3)                  <--------HAHB4             <---------AHL20(2) -------ARR11(3)                 --------->ICU4             --------->AHL20(1) -------GLK1(2)                  <---------YAB1             --------->AHL20(2) ------>ARR10            <---------MYB52(1)                 <---------AHL20(2)       -------->P  <--- >At4g35610        <---------AHL20(2)      --------->At4g35610         <---------ANAC58--------->TOE2(3) -At4g35610       --------->AHL20(2)<---------YAB1          <---------AHL20(1)     --------->MYB46(3)   gatttttttttctgatcatataaaatcgtttgcccattattaatctgcttccaaattagcaatttattagtttgctttcttcagaacaacctcatagatt  8702100                                    <---------YAB1                              <---------RAP2.6(2)                              <---------ANAC46                             <---------LBD16                          <----------DOF2--------->AHL20(1)                       <-----------GT1   --------->ARR11(3)                    <---------ICU4  <---------ANAC46                                   --------->ATHB51                   --------->ICU4--------->ARR14(2)                                   <---------YAB1                   <---------YAB1<---------ARR14(2)                                  --------->TOE2(3)                 <---------ICU4  <---------MYB52(1)                        <-------GAMYB --------->ATHB12<--------HAHB4<---------MYB46(3)                     <-----------RAV1(1) ------AHL20(2) <---------ATHB12<-------GAMYB                   <---------TOE1(3) <-----------GT1   tattcatttgaaatttccatcatttttactttgcggttacgaatatatagtccaatttccaagtctaagcttatgtgggttattttacattattgtttga  8702200                        ---------->DOF2                --------->ETT(2)                       <---------AHL20(2)    <---------ETT(2)                           <-------TEIL                   <---------RVE1(1)         --------->ETT(2)                       <-------TEIL                   <---------CCA1(1)    --------->At4g35610                    --------->AHL20(2)----                  --------->ARR11(3)    <---------At4g35610                 --------->YAB1       ----                  <---------ARR11(3)    --------->ZAT2 <---------ETT(2) --------->AHL20(2)       ----   acttatttctgaagcttggagatatttaaagtcaacataagtagctgtcgatatttgtcgacaggctgtctgaatcaaatataaaatacatacacttcca  8702300                                                                                    --------->HSFC1(1)                                                                                    --------->HSFB2a(2)                                                                              --------->AHL20(2)                                                                              <---------AHL20(2)                                                                              --------->ATHB51                                                                              <---------ICU4                                                                             <---------YAB1                                                                             --------->ICU4                                                                           --------->YAB1                                                               <----------DOF2<--------ATHB1                                                   <---------TOE1(2)     --------->ARR11(3)        --                                                  <---------ANAC46       <---------ARR11(3)    ------  --------->TOE1(2)                             <---------ANAC58        --------->YAB1    <---------- ----->ANAC58                          <------ZmHOX2a(1) --------------->AtSPL8     <---------HSFB2a(2) ----->ANAC58                    ---------->DOF2<---------ANAC46       ----------->GT1 <------ZmHOX2a(1) ----->ANAC46       <---------ICU4--------->DAG2<---------ANAC58     ---------->DOF2<---------HSFC1(1)   agaaactacgaagaaagtttcaaaattgcaatagaaaaagaggattgaagtcgtgtgtttttgtactttagtaaagataataatttctaggaaattgcaa  8702400 ----------->GT1   --------->ICU4 -------->DOF2   --------->YAB1                              <------ZmHOX2a(1) ---->DOF2       ---------->DOF2       ---------->DOF2 *TSS<---------TOE2(3) --CBF ---------->DOF2            ---------->DOF2      --------->YAB1         ------>ZmHOX2a(1)   agaaagttataaagaactataaagatgaaaacagaagaaaggaaagtggtatgacaaaaataaggaaatgaattcaagtcctaaaatgaaacacgatgtg  8702500                          ----------->HVH21                        <---------TGA1a                           <---------ARR14(2)                        --------->O2                             <------ZmHOX2a(1)                        --------->TGA1a                          ===============HOX2a_HOX2a               ===================bZIP_DOF                     <---------TOE2(2)               ---------->DOF2                  <-----------RAV1(1)--------->MYB52(1)             ---           <------ZmHOX2a(1)           --------->ANAC58      --------->TOE1(2)                    ---        <-----------RAV1(2)            --------->ANAC58     --------->ANAC46                      ===        <---------LBD16 <---------O2  --------->SPL7     <---------ETT(2)<------ZmHOX2a(2)      -----   ttcataagtttcaggagcaaagacactcgtgacaacttcgtaagccatctctgtggctgtctacgtaggaaacggatcaaaaccttcttgtatgacgaac  8702600       --------->TGA1a       =================================bZIP_DOF       <---------TGA1a       <---------O2    ----------->HVH21    ----------->TGA1  <---------ZAT2  --------->ZAT2  ----------->RAV1(2)  --------->At4g35610          --------->ANAC58                                                <-----  <---------At4g35610          --------->ANAC46                                     --------->ARR14(2) ----->P                       --------->ANAC58                     <---------HSFB2a(2) <---------HSFB2a(2) ------>MYB52(1)             ---------->DOF2                        --------->HSFB2a(2) --------->HSFB2a(2) ================MYC_MYB<---------MYB46(3)               <---------ATHB12    <----------DOF2<-------- ---->MYB46(3)          ----------->GT1      ----------->GT1        <---------LBD16 <---------ARR14(2)   taccagctgacgagaggtatgaagagtcgttaaaagcaattgaagtatcgaaaatttcagtcattgtgttctcggaaaactttggggattcgagatggtg  8702700                                                                                        --------->YAB1                                        <------MYB46(1)       =====================HOX2a_HOX2a                                        <------MYB83          <----------DOF2    <---------ETT(2)                                       --------->MYB59        ------>ZmHOX2a(1)  --------->ETT(2)                                 ---------->DOF2  <---------YAB1              ------>ZmHOX2a(1) ----ANAC46              --------->AtLEC2       ----------->GT1             ========================= -AtMYB61<---------REM1(1)  ---------->DOF2   <---------GLK1(2)             ------>ZmHOX2a(2)   tttagatgaagttgtagccatcttgaaatgcaaagaaaagtttggtcagattgtgatacctgtcctttaccatgttgatcctctcgacattgaaaatcag  8702800                                                                                           --------->LBD16                                                                                           <---------LBD16                                                                                         ------>MYB83                                           --------->MYB52(1)                --------->ANAC58                              <---------ANAC46                           --------->HSFB2a(2)            <---------At4g35610          --------->RAP2.6(2)             <---------HSFB2a(2)      <--            <---------GLK1(1)<-----------------------TaNAC69(2) <---------ARR11(3)       ------>MYB46(1)            --------->At4g35610      --------->DAG2             --------->ARR11(3)  <-----------GT1 <------ZmHOX2a(1)<----------DOF2   ---------->DOF2         ---------->DOF2  --------->ANAC58     <-- =======HOX2a_HOX2a        ----------->HVH21   --------->At4g35610     <-----------GT1--------->MYB46(3)   acaggaagttttggagatgcctttgctaagcgacgggataaagccgaacagcttcaagaatggaaagatagttttacagaagccattaacctccctggat  8702900                                                  <---------At5g28300                                                  <---------DOF5.7(2)                                                 <-----------GT1        <---------ARR11(3)          -              <---------TOE1(3)              <---------TOE1(3)          --------->ARR11(3)       ----              <---------TOE2(3)              <---------TOE2(3)  <---------At4g35610             <----       <----------DOF2                      ---------->DOF2     --------->At4g35610          <------- -------------AtSPL8   ------->GAMYB    --------------->AGL15 --------->ZAT18                <------- -------------AtSPL3<-----------GT1 <----------DOF2           <---------ZAT18       <---------LBD16<-   ggagtactgcttatttgaggtataaccccaaactcatactttctattaaagttaccgtcgtaagtgagctacaagatgttttaatctctgggattaatat  8703000  Previous    Next  AGI:  At2g20140.1    Description:  26S protease regulatory complex subunit 4, putative. similar to RPT2A (REGULATORY PARTICLE AAA-ATPASE 2A), ATPase [Arabidopsis thaliana] (TAIR:AT4G29040.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78907.1); similar to AAA ATPase; 26S proteasome subunit P45 [Medicago truncatula] (GB:ABD32889.1); similar to 26S proteasome subunit 4-like protein [Brassica napus] (GB:CAC14432.1); contains InterPro domain AAA ATPase, conserved site; (InterPro:IPR003960); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959); contains InterPro domain 26S proteasome subunit P Range:  from: 8699781    to: 8702165    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g20142.1    Description:  transmembrane receptor. similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G46510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16414.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64659.1); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157) Range:  from: 8702455    to: 8703724    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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