Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->YAB1                --------->ICU4                <---------ATHB51                                                           <---------ZAT14         <---------YAB1                                                              <-----------RAV1(2)      <---------YAB1                                                               ------->TEIL    <--------HAHB4                                                              --------->ANAC55(2)    --------->YAB1                                                              <---------ANAC58    -------->ATHB1                                                              <---------ANAC58    --------->ATHB51                                                            <---------ANAC55(2) -    <---------ICU4            <---------ATHB12                                  --------->ANAC46    -   <---------ATHB51<---------YAB1                                        <-----------GT1   <---------ZAT18   --------->ICU4-------->HAHB4          <---------YAB1              <---------TOE1(2)     --------->ZAT18   <---------YAB1<---------ICU4--------->YAB1                        <---------TOE2(2)   <---------ZAT18   gaacaattattatgcttaattatgattttcaaatgataacattatgtttgaactcttatatgggttcttcccatgttacaatacgtaccagggtgctcta  8668700                                                          <------MYB83                                                          ----------->GT1                                                          <------MYB46(1)                                                     <---------RVE1(1)                                                     <---------CCA1(1)                <---------ARR14(2)                  --------->ARR11(3)                              <                --------->AGP1                      <---------ARR11(3)                   ----------->HVH21                --------->ARR14(2)                ----------->ARR10             <-----------GT1   ---           --------->PCF5                  <---------ANAC46              ---------->DOF2 ----------->TGA1 -------->RVE1(1)           ------->TEIL   <---------ANAC58           --------->YAB1   --------->At4g35610 -------->CCA1(1)<------ZmHOX2a(2)         <---------ANAC58    <---------ARR14(2)      --------->CCA1(2)   aaatatccaattggtcccgatctatatatgtatgtagagactcttccttggatagatatttggtgaatccaaaaataaagttttacaagagatgacgaaa  8668800                              <------------CBF                             --------->ATHB12                            --------->ICU4                            <---------YAB1                       --------->YAB1                     --------->GLK1(2)                     <---------ARR11(3)                     --------->ARR11(3)                     <---------ARR14(2)                                                             -         ---------->DOF2 <---------YAB1             --------->GLK1(2) ------------>CBF             --     ----------->GT1 --------->ARR14(2)    ---------->DOF2      ---------->DOF2                    --  <------ZmHOX2a(1) <---------GLK1(2) --------->AHL20(2)     ----------->TBP                      <-- ---------TOE2(3)--------->YAB1       --------->AHL20(1)   <----------DOF2     <----------DOF2 ------ ------->DOF2 <---------GLK1(1)       <---------AHL20(2)   <---------------AGL15     <---------ICU4<-   caaaggatagtaaaagaaatcagaatcttgattattgaaattttttaaagacagaatcagcctttataaagaaacaatattctttattcatttccttcca  8668900                             <---------AHL20(2)         <----------DOF2     --------->AHL20(2) -------->RVE1(1)       ------------>CBF                                                --------->At4g35610 ------->GLK1(2)       --------->ANAC46                                                --------->ARR11(3) ------->ARR11(3)   ------>ZmHOX2a(2)                                      --------->ARR14(2) -------GLK1(2)   <---------ARR11(3)                                       <---------ARR14(2) --->HSFB2a(2)    <-----------ARR10                             ------------>CBF       <---------ARR11(3) --------ARR11(3) --------->ARR11(3)              <------------CBF        <------ZmHOX2a(1)    ------   aaatctctcttctttaagatgatctacacaattaaataccgtcgatttcgaaaattgaagtttaaaatcaatatgaggatttgaaataagagcttacatg  8669000                                                                    --------->ANAC58                                                                    --------->ANAC58                                                                    --------->ANAC46                                                                --------->ANAC58                 <---                                                                --------->ANAC58                -----                                                           --------->ANAC58                ----------                                                           --------->bZIP60(2)          ----------->RAV1(1)                                                           --------->ANAC58          --------->YAB1                                        ----------->GT1    --------->ANAC46        --------->ANAC58        --------->ARR11(3)     <------MYB46(1)      --------->HSFB2a(2)        --------->ANAC58 <----        <---------ARR11(3)     <------MYB83 <---------AHL20(2)  <---------ALFIN1   --------->ANAC58 <       <---------CCA1(2)      --------->MYB59       <---------HSFB2a(2)        --------->ANAC58 <---- --->AtLEC2      ----------->TBP     <---------AtLEC2    --------->ZAT6 ---------->DOF2--------->ANAC46   cacacacacatatctctctatatataagtgagtaggtttacatggtttaattttctataacacgacacacacgaaaaagagaagcaagcacaacacaatt  8669100                                                                <---------WOX13(1)                                                              --------->ATHB12                                                              <---------ICU4     --------->YAB1                                          <---------YAB1  --------->YAB1                                             --------->ICU4                     <---- ------AHL20(2)                                            <---------ICU4                   <-------- ---->AHL20(2)                      <---------GLK1(1)     <---------YAB1             --------->AHL20(2) -->CBF                             --------->GLK1(1)   --------->YAB1               <---------AHL20(2) -----AHL20(1)                      <---------At4g35610<-------TEIL                 --------->AHL20(2) -----------TBP      --------->ANAC58        --------->YAB1--------->YAB1         <----------DOF2 -----AHL20(2)       --------->ANAC58    ------>ZmHOX2a(1)--------->ICU4          ------>ZmHOX2a(1)--   ttttttataacaactaaaatggcaaacaatatggtcgcatctccttataagaatacgttcatgatgattgctcttgttctcatccttttaatttcaggta  8669200                                                                                                    <                                                                                                    -                                                                                                  ---                                                                                                 <---                                                                                               ------                                                                                               ------                                                                                            <--------                                                                                           <---------YAB1                                                                                         -------->HAHB4                                                                                         --------->YAB1                                                                                    <---------MYB52(2)                                                                            <---------YAB1 --------->ICU4   ----------->GT1                                                    --------->AHL20(2)<---------YAB1 -----KAN4(2)                                                         --------->AHL20(1)--------->ICU4 -TOE1(3) ----------->GT1                    <---------YAB1           <---------AHL20(2)<---------ATHB12 ------->ARR11(3)                          <----------DOF2           --------->AHL20(2)<---------TOE2(3)   taatcttgtaaatagcaaaataagttttttttttcatatataaaacttttatagatggttttcaacaaaaaaaaaattatcaaacaactaatgataattg  8669300 --------->ATHB51 <--------ATHB1 <---------ICU4 <---------AHL20(2) --------->AHL20(2)                                      <---------ANAC46    <-----------GT1 ---------ATHB51         ====================================HOX2a_HOX2a<------MYB46(1) -------->ICU4          <---------ARR11(3)            ------>ZmHOX2a(1) ----------->GT1 ------>YAB1      --------->ANAC58                   <---------LBD16   --------->MYB59 ------YAB1       --------->ANAC58                  <---------ANAC46 >>>>>>>>>SARD1 ----->GT1   <-------TEIL<------ZmHOX2a(2) ==================HOX2a_HOX2a<------MYB83 --->YAB1<---------TOE1(2)                 ------>ZmHOX2a(2)         >>>>>>>>>CBP60g           <----- -ICU4   <---------TOE2(2)     ----------->GT1<---------MYB52(1)----------->GT1              ------->TEIL   taataatttcataggttcagaagcaagatcgaatggaatatatgatccgatgtgtcctggagtatgtggaaatttggttaaaccagattgcaatggactt  8669400                                                                                                    -                                                                                                  <--                          --------->ARR11(3)                                                      <--                          <---------ARR14(2)                                                     <---                         <------ZmHOX2a(1)                                                       <---                      <------ZmHOX2a(1)                                                      ------>MYB46(1)                   <-----------RAV1(2)                                                       ------>MYB83                 ------>ZmHOX2a(1)                                                          ---------               <---------ANAC58                                                             ---------               <---------ANAC58                                                            --------->AtMYB61               <---------ANAC46                 <-----------RAV1(1)                        <---------MYB111(1)            --------->GLK1(1)           <------ZmHOX2a(1)                                  <---------MYB55(2)         <---------TOE2(3)--------->ARR14(2)   ------->MYC3         --------->GLK1(2)      --------->MYB46(3)         <---------TOE1(3)<---------ARR11(3)   <-------MYC3    ---------->DOF2             <---------MYB111(2) -----DOF2  <---------GLK1(1)        <---------LBD16       ---------->DOF2------->TEIL    --------->MYB46(3)   tgccatgagttagggtttcctgcaggaggatattgtaaaccaggaaacacatgttgttgcaaaaagaaagactctggacctgttgatgttccaccaactg  8669500                                                                                                   <-                                                                             --------->ATHB12      <-                                                                             --------->YAB1       <--     <---------YAB1                                                          <---------ICU4      <---  <---------WOX13(1)                                                         <--------HAHB4      <--- -------->ATHB12                                                            <---------ATHB12<-------- -------WOX13(1)                        --------->YAB1                <---------ZAT14     <----------DOF2 --------DOF2                        <---------HSFB2a(2)              --------->ZAT14     ----------- ------ANAC58               <---------AHL20(2)                        --------->ZAT18     <---------- ------ANAC58              <---------AHL20(2)                         <---------ZAT18    ============ >MYB52(1)    --------->WRKY45       --------->HSFB2a(2)           <---------bZIP60(2)   <----------- >MYB55(1)  <----------DOF2--------->AHL20(2)                      <---------ANAC46      <-----------   cttgattgttatttctttgactaatgtcattaattttctctagaataaaacttcgaaaattgaaatgtgatgtgcacaatcatttctgttttctttattt  8669600  Previous    Next  AGI:  At2g20070.1    Description:  similar to LCR81 (Low-molecular-weight cysteine-rich 81) [Arabidopsis thaliana] (TAIR:AT2G25295.1) Range:  from: 8669119    to: 8669695    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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