Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->AHL20(2)               <<<<<<<<<<GT-3b            <---------AHL20(1)          <---------AHL20(2)       ------->TEIL<----------DOF2                                                               ---- <-------TEIL<---------YAB1                                                                    <----- -->YAB1  <---------YAB1                                       --------->At5g28300           <------- -->AHL20(2)<---------AHL20(2)                     ----------->GT1                           <-------   aaatacatgaatattatttttcttttaatattcgtaagtgaattgactcaaacatgtaaattctcggtaacttgactactaaaaattttaaacttaagga  8654500                                              --------->ANAC46                                          <---------ANAC55(2)                                          <---------ANAC58                                          --------->ANAC55(2)                  --------->LBD16 ------                                          <---------ANAC58                    --------->HSFC1(1)                                         --------->MYB52(2)                   <---------HSFC1(1)         --------->YAB1              ----------->GT1                          <---------HSFB2a(2) ----->GLK1(1)      <---------ZAT18 <---------TOE2(3)                         --------->HSFB2a(2) -ZmHOX2a(1) <---------TOE1(3)      --------->DAG2               --------->ANAC58          --------->ARR11(3) --TOE2(3)   <---------TOE2(3)    ---------->DOF2                --------->ANAC58          <---------AHL20(1) --TOE1(3)   --------->DAG2       ------------>MYB.PH3(1)        --------->ANAC46          <---------ARR11(3)   attcaaaacaaatataaggtagttcacataaaaaaaaaaaggttacttactccacaattcaaaattcaagacatatatttccagaaatatcgatatattc  8654600                                                                       --------->MYB52(1)                                                                       ------>MYB83                                                                       -------->P                                                                       ------>MYB46(1)                                                                      --------->MYB55(1)                                                                     --------->DEAR3(1)                                                                     <---------MYB55(2)                                                        ------>ZmHOX2a(1)   --------->ARR14(2)                                                       --------->TOE1(3)    <---------ARR14(2)                       --------->ARR11(3)         --------->ATHB51   <---------MYB46(2)                       <---------ARR11(3)         <---------ICU4     --------->AtMYB61                       --------->GLK1(2)          --------->YAB1     <---------MYB111(2)                      --------->CCA1(1)           <--------ATHB1     <---------MYB111(1)              <---------ETT(2)                   <---------ATHB12    --------->MYB46(3)            <---------At4g35610                  <---------ATHB51 <-----------GT1            <-------GAMYB                        --------->ICU4  <---------ATHB12    <---------GLK1(2) --------->RVE1(1)      ------------>CBF    --------->MYB46(3)                 - ------>CBF<-----------RAV1(1)        <----------DOF2  --------->TOE2(3) --------->YAB1        <-----   aattcatattcttctgttgacaaaaaatctttcaccttcactttcttcacaataattccttaaactaatcaccaaccagaacctatagaagtattagtta  8654700                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                     <---------ANAC46                                                                                     <---------O2                                                                                     --------->O2 <--                                                                                 <-----------HVH21<--                                                                                <---------bZIP60(1) <                                      <-----------HVH21                    --------->YAB1      ------                                   <---------ANAC58                        --------->MYB52(1)  ------                                   <---------ANAC58                   <-------TEIL----------->HVH21--                             <---------AHL20(2)                       ------------>CBF      ---------     <-----------GT1         <---------AHL20(1)             ------------>CBF<---------TOE2(3)  <----- ---------->GT1              --------->AHL20(2)   <---------YAB1     --------->GLK1(2)   --------->YAB1 ------TBP                <---------AHL20(2)     <-----------GT1 --------->YAB1 --------->bZIP60(1)--   tatagtttaacttattccacatatgtattattttatttcttgtcacagaattatccatgcctctcaatgagattcaataacgatgtcacgttgataatat  8654800    <---------ANAC58    <---------ANAC58    <---------ANAC46 ----AHL20(1) ----AHL20(2) --->AHL20(2) -------YAB1 -------AHL20(2)                                                                       ------------>CBF ------------CBF                                                                   ------>ZmHOX2a(1) --->AHL20(1)                               <----------DOF2                       --------->TOE2(3) --->ARR11(3)                   --------->YAB1                                  ------>MYB83 ------->ATHB51                <-------TEIL <---------DAG2                      ------>MYB46(1) >AHL20(2)        <----------DOF2       --------->ANAC46                   --------->YAB1 ----ARR11(3)  --------->ARR11(3)       --------->ANAC58    <----------DOF2<-----------GT1 <---------ATHB12 ------->ATHB12<---------ARR11(3)       --------->ANAC58  ---------->ID1  --------->MYB46(3)     <---   attattgcgtctaaaaacatctttctgtccaaattcataaacacgactttttttgttttcgtctttttctcatcgaatcaccatcctaaaacaatgaatt  8654900                                                                                                <----                                                                                               <-----                                                                                         --------->ANAC58                                                                                         --------->ANAC46                                                                                         --------->ANAC58                                                                                       --------->MYB46(3)                                                                                  <---------ANAC55(2)                                                                                  --------->ANAC55(2)                                                                                  --------->ANAC58       <---------GLK1(1)                             <---------At4g35610          --------->ANAC55(1)       --------->GLK1(1)                             --------->At4g35610 ------>ZmHOX2a(1) ----------    --------->ANAC58                             --------->ARR14(2)   ------>ZmHOX2a(1)<---------MYB52(2)    --------->ANAC46                             ------->TEIL   ------>ZmHOX2a(1) --------->ANAC58    --------->ANAC58                             <---------ARR14(2)------>ZmHOX2a(1) ----------->RAV1(1) --------GT1            <<<<<<<<<TBF1           <---------CCA1(2) <---------ALFIN1--------->ANAC46   caccacaagaaatctccattctcttcttcttcatcatcttcttagactatgtatctgctcaatctcctcctcctcctaatctatacgcaacaagcgacct  8655000        --------->ZAT2  --------->ANAC46  --------->ANAC58  --------->ANAC58                                     --------------------->WRI1 ------DOF2              --------->LBD16    --------->ZAT14               --------->ANAC46 ----DAG2         --------->YAB1 <-----------GT1       <----------DOF2  --------->ANAC46            < ->HVH21<---------ZAT2 <---------LBD16      <---------ZAT14      ------>ZmHOX2a(1)                 <-   tttcaagccaagcttagctatcatcaccggagttttctccatcgtcttcactctcacctttgttctcctcgtctacgcgaaatgcttccacaatgacctc  8655100                                       ------>ZmHOX2a(2)                                       ====================HOX2a_HOX2a                     --------->ANAC58         ----------->RAV1(1)         <---------ARR11(3)                    --------->ARR14(1)        --------->DREB2C(2)        <---------YAB1                          --------->GLK1(2)        ----------->HVH21          --------->ICU4      <----------DOF2    <---------ARR14(2)   ------       --------->DEAR3(2)     --------->ANAC46      <------ZmHOX2a(1)     <---------ARR11(3)   ------ ------ZmHOX2a(2)             --------->ANAC58    --------->ANAC58        <---------GLK1(2)--------->ANAC58 ----------HVH21              --------->ANAC58    --------->ANAC58        --------->ARR14(2) --------   cgatcagagaccgacagtgatggagaaagaatacgacatgatcgtctctggcaaggacttttcaatcggtcttcaagattctctggtcttgacaagaaag  8655200      <-----------ARR10    ------->TEIL    <-----------ARR10    <---------ARR11(1)                                            <---------MYB52(1)   <---------GLK1(2)   --------->GLK1(2)                        <---------YAB1   <---------ARR14(1) <---------GLK1(2)               <----------DOF2                           -----   <---------CCA1(2)  <---------ARR14(2)             <---------ANAC58                          <----- --->ANAC58           --------->ARR14(2)  ----------->GT1   --------->KAN4(2)                -------- --->ANAC58   <----------DOF2          <------ZmHOX2a(1)   <---------KAN4(1)           --------->ARR11(3) -->DOF2      <---------DAG2   <----------DOF2       <---------ANAC58                  <---------ARR11(3)   caatcgaatctcttccctttttcagattctctgctttgaaaggattgaaacaagggcttgaatgttctgtttgtttgtctaaattcgaagatgttgagat  8655300                                                                              <----------DOF2                                                                       <---------ANAC58                                                                       <---------ANAC55(2)                                                                       <---------ANAC46                                                                       --------->ANAC55(2)                                                                       --------->TGA1a                                                                       <---------O2                                                                       ==================bZIP_DOF                                                                  --------->ANAC58                                                                  --------->ANAC58                                      <---------ANAC58            --------->ANAC46                                      <---------ANAC58         --------->ZAT2 ------>ZmHOX2a(1)                                      <---------ANAC46         --------->At4g35610                                     <---------MYB46(3)     <---------At4g35610                           <----------DOF2                  --------->At4g35610                           <---------DAG2              <---------ANAC58<---------ANAC58                        --------->ANAC58               <---------ANAC58<---------TGA1a     <----------DOF2    --------->ANAC58               <---------ANAC46<---------ANAC55(1) ---->GLK1(2)        <---------ARR14(2)        <<<<<<<<<<<<<<<<<LFY    --------->O2 ----GLK1(2)         --------->ARR14(2)       <---------WRKY18(1)<---------ZAT18                  --- --->ARR10    ---------->DOF2  --------->YAB1--------->WRKY38(1)<---------ALFIN1  <---------ANAC46<--   tcttaggcttttgcctaaatgcagacacgcttttcatattggttgtattgaccagtggcttgagcagcacgctacgtgtcctttgtgtagaaacagagtc  8655400  Previous    Next  AGI:  At2g20030.1    Description:  zinc finger (C3HC4-type RING finger) family protein. Identical to Putative RING-H2 finger protein ATL2D precursor (ATL2D) [Arabidopsis Thaliana] (GB:Q9SL78); similar to protein binding / ubiquitin-protein ligase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G28890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65475.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 8654894    to: 8656066    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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