Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    ------->MYC2  <-------MYC4  ------->MYC3  ------->MYC4  <-------MYC2                                                                              ---------  <-------MYC3                                                                             <---------ARR14(2) <---------ANAC55(2)                                                                       --------->ARR14(2) <---------TGA1a                                                                      <------NtERF2 --------->ANAC55(2)                                                                 ------>NtERF2 <---------O2                                                                       <---------DEAR3(1) --------->O2                                                                      <---------LBD16 --------->TGA1a                                                                  --------->ANAC46 --------ALFIN1                                                 <---------At4g35610--------->LBD16 ----->AtMYB61                                               --------->SPL7      ------->GAMYB ------ALFIN1     ----------->GT1                           <---------PCF5       <---------LBD16 ---->ANAC46      --------->YAB1    <---------MYB52(1)     ----------->HVH21   -------->P----------->ARR10 -->AtMYB61    <---------ICU4      <-----------TGA1        <---------SPL7      ------>MYB46(1) -->ANAC46    <---------YAB1       <-----------HVH21    -------->P             ------>MYB83<---------GLK1(2) ---ALFIN1  --------->YAB1        --------->ANAC46      --------->MYB52(1)    <---------ALFIN1 ->MYB46(3)<---------YAB1<-----------GT1          <---------At4g35610        <---------ALFIN1   cacacgtgttactatcataatcgtaattttccttctccgtcatccaatactcagttgctaccggaccgctcatcgttccccaacccgcggctagattctc  8637400                                                     ----------->ARR10                    --------->ATHB12                                                  <---------ANAC58                     <---------ALFIN1                                                  <---------ANAC58                     --------->ANAC58                                                 <-------TEIL                          --------->ANAC46           --------->ANAC58                    ------->MYC3                            --------->ANAC58           --------->ANAC46                    <-------MYC3                     <---------ANAC58   --------->HSFB2a(1)                <---------ANAC58           <---------AtMYB61   <---------ALFIN1 >GLK1(2)  --------->ANAC58           <---------ANAC58 <---------AGP1           <---------ANAC58   <-   gccgaatggtcccaaggaatgcttcatggcacagtctctggctcgttcatgtgcgtagctctgtgcataggtcgcaagagtttcgttccacaccattggt  8637500                                                                                  <-------GAMYB                                                                                 --------->MYB55(2)                                                                                 <---------DEAR3(2)                                                                                <---------RAP2.6(2)                                                       --------->bZIP60(1)      <---------DREB2C(2)                                              <---------LBD16                   <---------ANAC46                                           <---------ANAC46                     <---------DEAR3(1)                                           <---------ANAC58              <---------ANAC58             <---------ANAC58              <---------ANAC58              <---------ANAC58             <---------ANAC58             --------->MYB52(2)       <---------ANAC58             -----             <---------ANAC46            <---------ARR14(2)        <---------ANAC58             -----     ------>NtERF2                       --------->ARR14(2)        <---------ANAC46--------->ALFIN1    <---------ETT(1)               ------->PIF5        <---------bZIP60(1)<----------DOF2     <------    --------->DEAR3(1)             <-------PIF5<---------ANAC46<---------MYB52(1)<---------MYB46(3)<- --------ATERF1(1)             --------->MYB46(3)   ----------->HVH21<---------MYB52(1)       -------   ccgactccgaccatggctcgggccttgttgtgaaccacgagcgtttcttgcggtttgacatcaccgtttgcgtttgcttttggcggttgagcgggagtgt  8637600      <---------ANAC58                                                                            ---      <---------ANAC58                                                                            <-- --------->ARR14(2)                                                                       --------->MYB52(2) <---------ARR14(2)                                                                    <-------GAMYB ------>HVH21                                                                         ----------->GT1 ------>TGA1                                              --------->ANAC58            <---------MYB46(3) ---ZAT6                                                  --------->ANAC58         <---------ANAC58 --------YAB1          --------->YAB1               ---------->DOF2                <---------ANAC46 -->ALFIN1----------->GT1 --------->YAB1  ------->TEIL<---------MYB52(2)           <---------ANAC58   gacgataggcttgagttaaatcgaagaataatgctactacgatgaaactataaccaaagaacgacatttcattcattttgtatttgtgtggttaattgtt  8637700                                                                       <---------ANAC55(2)                                                                       --------->ANAC55(2)                                                                       <---------ANAC46                                                                      <---------LBD16                                                                     *TSS                                                                    <---------ARR14(2)                                              <---------AHL20(2)    <---------SPL7                                           ------->TEIL          <------NtERF2                                        --------->ANAC55(2) <---------AtMYB61             <---------ANAC58          <---------TOE2(3)  <----------DOF2             <---------ANAC46          <---------TOE1(3) <---------ANAC46                  --------->ARR11(3)             <---------ANAC58  <---------ANAC58 <---------HSFB2a(2) --------->ARR14(2)     <---------ARR11(3)             ----------->GT1   <---------ANAC58 --------->HSFB2a(2)<-------GAMYB          <---------CCA1(2) ------>HSFB2a(2)    ---------->DOF2  --------->MYB52(1) <---------ANAC58          --------->HSFB2a(1) -------HSFB2a(2)---------->DOF2      <---------DOF5.7(2)<---------ANAC58          <---------HSFB2a(1)   ttggaacttattgtgtcgtaaaagaaagcattttcttggctaacgtatttatagaagttgctttggtggggttacggagtttggaacgttttatatctta  8637800                  ----------->GT1            ------>ZmHOX2a(1)           --------------->AGL15                                                             --------           <---------------AGL15                        <------------CBF                     --------          ----------------->AGL1                <------ZmHOX2a(1)             <---------ARR11(3)          <-----------------AGL1          <---------ARR14(2)          <------ZmHOX2a(1)   <------ZmHOX2a(2)          ----------------->AG       <---------ZAT6 --------->ANAC58  ===========================HOX2a_HOX2a       <----------DOF2               ----------->GT1--------->ANAC58 ----------->GT1     --------->ARR11(3)    <-----------GT1         <----------DOF2   --------->LBD16       <---------TOE2(3)    --------->AGP1   ttcttttcactttcctaatgttgaaaaactctttacatagtgtaaatccaggacaagaaattgatagaataaggaaacttgatattctacagatcaagaa  8637900                                                                --------->YAB1                                                                <--------ATHB1                                                           <---------YAB1                        ------>ZmHOX2a(1)             --------->ZAT6                  <---------ICU4                    <---------ARR11(3)        <---------WOX13(1)                       <---------GLK1(2) ->ANAC58    ------>ZmHOX2a(2)  <---------YAB1--------->YAB1   <---------ATHB12       --------->AtMYB61 ->ANAC58    ==================HOX2a_HOX2a<---------AHL20(2)   <---------ATHB51  --------->YAB1   aactcatctaattgatctaattagtcctccgattactcttgtatataaacagaatatcactatcaataatacatctcattcaataagaccataactcaat  8638000                                                                             <---------MYB46(3)    --                                                   <<<<<<<<<RAP2.2          <---------ATHB12   <-----                  <---------WRKY12             <----------DOF2         --------->ANAC58        ------     <---------At5g28300<-----------GT1   <-----------GT1            ---------->DOF2           ------    <-----------GT1   <----------DOF2 <----------DOF2<---------WOX13(1)--------->ANAC58        <-----   acaaaattacagttttagcgtcaactttacaatctccaagcttttcacactttagattgacaatagcaaacaaaagcaatggttcaattcgaatgcatat  8638100                                                     ----------->GT1                                                    --------->DAG2                                                   ---------->DOF2                                               --------->ANAC58                            ---------- ----->TEIL                                    --------->ANAC58                    --------->CCA1(2) --MYC3                                        --------->ANAC46                 <---------TOE2(3) ->MYC2                                     <-------TEIL                        <---------YAB1 ->MYC3                                   <---------SPL7                  --------->AHL20(2) --MYC2     ------->TEIL                --------------->AtSPL8      --------->GLK1(2)    ------>ZmHOX2a(2)   gcatttccaaagtgtatgttttacaaaaatcaattgttcttcgacgtacaagaaaaagtgatttcaagagcatctataaattaagatttgatcccacaga  8638200                   <-----------GT1                                              <----------DOF2            --------->CCA1(2)                                               <----------DOF2           <---------ARR11(3)                                         --------------->AtSPL8        -         <---------TOE2(3)                                      <----------DOF2 --------------->AGL15         <---------YAB1  ----------->HVH21                      <---------DAG2  <---------------AGL15 ->RAV1(1) --------->ARR11(3)          <-------TEIL       --------->ANAC46------->TEIL         ------   caaactagattaagatatagtttacccttgacatatacaagttcatataacatgggttagaaggcacttttgtatgtactttctttaactagaaaacaaa  8638300  Previous    Next  AGI:  At2g19990.1    Description:  PR-1-LIKE (PATHOGENESIS-RELATED PROTEIN-1-LIKE). similar to pathogenesis-related protein, putative [Arabidopsis thaliana] (TAIR:AT4G33720.1); similar to prb-1b [Nicotiana tabacum] (GB:CAA47374.1); contains InterPro domain Allergen V5/Tpx-1 related; (InterPro:IPR001283); contains InterPro domain SCP-like extracellular (InterPro:IPR014044); contains InterPro domain Ves allergen (InterPro:IPR002413) Range:  from: 8637065    to: 8637769    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version