Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->GLK1(2)  --------->ANAC55(2)  <---------ANAC55(2) <-------TEIL --------ARR14(2) ------->ARR14(2) ------->GT1 -->MYB52(1)                                                 <<<<<<<<<<WRKY63 ----->AGL3            ----------->GT1                     ----------->GT1 ------AGL3 ------->TEIL                         <---------TOE2(3)                             ------ ----->AGL2<---------GLK1(2)         <---------DAG2    <---------TOE2(3)                     --------   ggatacataatctgaatctctaatcttgttaaaaatccaatttttgacattgaagttgagatagtcaaatccaaaacagatggaaacagagaatacctca  8566400                                                                                         <---------HSFB2a(2)                                                                                   <---------ANAC58                                                                                   <---------ANAC58                                                 ---------->DOF2                <---------WOX13(1)                                              --------->LBD16                 --------->ATHB12          <---------TOE1(3)                  --------->HSFB2a(2)             <---------YAB1  <---------ANAC58                           <---------HSFB2a(2)           <---------At4g35610  <---------ANAC58   <---------ZAT14        <---------LBD16--------->YAB1<-----------RAV1(2) --->ATHB12          --------->ZAT18     <---------GLK1(1)<-------TEIL  <------NtERF2    --------->HSFB2a(2) ->TOE2(3)<---------TOE2(3)      ------>ZmHOX2a(1)      <---------ARR14(2) --------->At4g35610   ttgagcttgtctaacgtttggagagtactagtctcctgtttgggtttcccgaatagccgattcataaacatggtggcagatgattgtttgcctagaaaat  8566500                                          --------------->AGL15                                          --------->TOE1(3)                                          <---------------AGL15                                          --------->TOE2(3)                                          ===========================================================                                          ----------------->AG                             <------ZmHOX2a(2)                                <---------ANAC58                             =============================HOX2a_HOX2a      <---------ARR14(2)                ---------->DOF2          --------->ZAT6     --------->WOX13(1)<---------ANAC46         --------->HSFB2a(2)--------->ARR11(3)          --------->WOX13(1) --------->ARR14(2)         <---------HSFB2a(2)<---------ARR11(3)       --------->GLK1(2)  <---------TOE1(3)       <------ZmHOX2a(2)---------->DOF2  ----------------->AGL2--------->YAB1 <---------ANAC58  XXXXXXXXXXXXXXXXXXXX>MIR832-5P    <----------DOF2<------ZmHOX2a(1)    <---------TOE2(3)       <----   caaactgagatcgagaaacaaagaatcaaagatcaattctttaaccctaaacaggaatctatcaatcgaaatttagggttccgttcacaacaaaattcga  8566600                  ------>ZmHOX2a(2)                                                   <---------WOX13(1)                 <------ZmHOX2a(2)                                                  --------->ATHB12                <---------ARR11(3)                                              --------->GLK1(1)                --------->ARR11(3)                                              <---------GLK1(1)      <-----------------AGL3                                            <---------ARR11(3)      ----------------->AGL3                                            --------->ARR11(3)   <---------CCA1(2) ---------->DOF2       <----------DOF2              <---------GLK1(2) =======================MADS_MADS--------->DAG2                       <---------TOE1(3)             - -----GLK1(2) --------->MYB59  ---------->DOF2        ---------->DOF2 <---------TOE2(3) --------->YAB1   ttctcaaatctaaaattagatcccaaagacaggtaaaggtgaagactttacaaatacaaagagaagaattttaagattttggaaatcgattgataaatac  8566700                                  <---------WOX13(1)                                --------->ATHB12                              <--------P                              <---------WOX13(1)                   <-------GAMYB                             <-------GAMYB                        <---------ANAC46                            <---------MYB46(3)                    <---------DEAR3(1)                           <---------AtMYB61                 --------->MYB52(1)                        <----------DOF2                     --------->ARR14(2)   --------->MYB52(1) --------->HSFC1(2)                    <---------ARR14(2) ---------->RAV1(2)   <---------HSFC1(2)--------->CCA1(2)>>>>>>>>>TBF1                            ---   aaacctgagggatttgagatgggaagcttttggttgattgagagatgagattaatggaagaagaaacggcgttgaagtttttttttgtttgggtttcttc  8566800                                                                             --------->ARR14(2)                                                                             <-----------ARR10                                                                      --------->ANAC46                                                                      --------->ANAC58      <--------                                                                      --------->ANAC58   <---------AHL20(2)                                                                <---------ANAC58         --------->AHL20(2)                                 <-----------GT1           <------MYB46(1) <---------DEAR3(2)                       *TSS <------------CBF               <------MYB83    <---------HSFB2a(1)                       <---------------AGL15               <---------MYB46(3)<---------ARR14(2)                       --------------->AGL15             <---------WOX13(1)--------->HSFB2a(1)           ------>MYB83--------->ICU4                  --------->ATHB12    <---------HSFC1(2)--------           ------>MYB46(1)<---------YAB1              <---------YAB1 <---------LBD16    --------->AHL20(2)           -------->P --------->ANAC55(2)    <---------WOX13(1) <---------ANAC58<-----------GT1<-----          ------>ZmHOX2a(1)--------->ATHB51 <------------CBF   --------->MYB52(2)    <----------DOF2<         <---------MYB59<---------ICU4    <---------YAB1<------------CBF   --------->HSFC1(2)<------- ------->DOF2    ------->TEIL<---------YAB1--------->ATHB12----------->GT1<---------DEAR3(1)---------   gaaagccttgtcctacctgtacttacttattattgttactcattttgattgatattttgattggttacttacacggacggttctacccttttaaattaat  8566900                                        <---------AHL20(1)                              ----------->GT1                              --------->TOE2(3)                              --------->TOE1(3)       ------>ZmHOX2a(1)                             ----------->GT1          <---------At4g35610       <---------ANAC58      <---------ANAC55(2) --------->GLK1(1)       <---------ANAC46     <-------TEIL--------->AHL20(1)       <---------ANAC58   --------->ARR14(2)     <---------GLK1(1) -AHL20(2)                <---------ARR14(2)<-----------GT1                              <---------WOX13(1) ->AHL20(2)           --------->YAB1    --------->AHL20(2)                             <------ZmHOX2a(1) ----TOE2(3)       <------------CBF   <---------ARR11(3)                              <---------YAB1 ------------CBF  --------->ATHB12    --------->AHL20(1)                 <---------WOX13(1) --AHL20(2)      <---------AHL20(2)   <---------AHL20(1)              <---------YAB1 <---------TOE2(3) >AHL20(2)       <---------YAB1       --------->ARR11(3)     ---------->DOF2    <----------DOF2  <---   gaaattgtttcttggaaatttcattgaaaatacgttaaaaaatattttacgaattcctctgagaaaagttttctaattggttctttttaggattgatatt  8567000                                                                           <---------AHL20(2)                                                                           --------->AHL20(2)                                                                       <---------AHL20(2)                                                                       --------->AHL20(2)                                                                      --------->AHL20(2)                                                                      <---------AHL20(2)                                  <---------ANAC55(2)                 <---------AHL20(1)                   --------->ATHB12                                   --------->AHL20(1)             <---------ANAC55(2)  <---------ANAC46                   <---------AHL20(2)             --------->ANAC55(2)  --------->ANAC55(2)                --------->AHL20(2)       <---------WOX13(1)         <---------ANAC58           <---------ANAC58                --------     <------ZmHOX2a(1)       <---------ICU4                  <---------ANAC46     ----------->GT1    <---------YAB1<---------YAB1  <---------ANAC58           <---------ANAC58    ----------->GT1   <---------TOE2(3)   --------->YAB1              <---------DAG2 <---------AHL20(2)        --------- ------AHL20(2)   --------->ICU4  ----------->GT1  <----------DOF2--------->AHL20(2)       ----------   ttttttaggattgatatgtgattattgataaaaatttcgtaataacacataaactttttttttgcttataaattaatttaaataagttaaaaaaaaagta  8567100                                                              --------->YAB1                                                             <---------YAB1                                                            --------->AHL20(1)             --------->ANAC58                                 --------->AHL20(1)         <---------AHL20(2)             --------->ANAC58                              --------->AHL20(2)            --------->AHL20(2)           --------->ZAT6 <---------AHL20(2)       <---------AHL20(2)               --------->YAB1     <---------AHL20(2) --------->AHL20(2)       --------->AHL20(2)           --------->ICU4        <---------AHL20(1) --->GT1              --------->AHL20(2)         --------->ANAC46      --------->YAB1  <-----------GT1 >DAG2                <---------AHL20(2)--------->YAB1 <---------AHL20(2)    <---------AHL20(2) >DOF2               --------->AHL20(2)<---------YAB1  --------->AHL20(2)    --------->AHL20(2)   gaattaattcggattaaaaaacataaaattaaaaatatactataataatccacagaaaaaattataataactagaataatttttttttttaacacgaata  8567200                                                                      -------->HAHB4                                                                      -------->ATHB1                                                                      <---------ICU4                                                                      --------->ATHB12                                                                      <---------AHL20(2)                                                                     <---------ATHB51                                                                     <---------YAB1                                                                     --------->ICU4                                                                   <--------HAHB4                                                 <---------AHL20(2)<---------ICU4                                                 --------->AHL20(2)<--------ATHB1                                              --------->YAB1       --------->ATHB51                                            <---------YAB1<---------ICU4                                         <---------AHL20(2)        --------->YAB1                  <----------DOF2        <---------AHL20(1)       --------->ICU4                  <---------DAG2         --------->AHL20(2)       <---------ATHB12           <-------               <-----------GT1     --------->TOE2(3)--------->AHL20(2)--------->ATHB51       --------            <----------DOF2     <-----------GT1 --------->AHL20(2)<---------ATHB51           <-------       <----------DOF2 --------->YAB1    --------->AHL20(1)       --------->AHL20(2)    <----------DOF2   actagaatactttacttttactttataaaaacatttacattattttattaataaataaaaacatgacaataattattgaaaacctcttctcttttcttat  8567300  Previous    Next  AGI:  At2g19830.1    Description:  SNF7.2. similar to SNF7.1 [Arabidopsis thaliana] (TAIR:AT4G29160.3); similar to SNF7.1 [Arabidopsis thaliana] (TAIR:AT4G29160.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61998.1); contains InterPro domain Snf7; (InterPro:IPR005024) Range:  from: 8564811    to: 8566823    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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