Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <<<<<<<<<<GT-1                   <----------DOF2                               <--------             <---------ARR11(3)             ---------->ID1                                  ---------       --------->ANAC46                    <-----------GT1                                  <--------      ------->GAMYB                    <---------MYB52(1)                             <---------GLK1(2)     <---------ALFIN1            --------->ZAT2                                       --------->ARR11(3)    <---------REM1(2)            --------->GLK1(1)                                    <---------ARR11(3) -------ARR11(3)                 <---------ZAT2                                     ----------->ARR10 ------>ARR11(3)                 <---------GLK1(1)                                  <-------TEIL ------CCA1(2)          ---------->DOF2<XXXXXXXXXXXXXXXXXXXXXMIR2936 <---------MYB52(1)     <-------- -----AHL20(1)  --------->TOE2(3)--------->At4g35610   <----------DOF2          <---------TOE2(3) -----ARR11(3) --------->ATHB12  <---------At4g35610   --------->TOE2(3)   --------->ATHB12 <-------- ---->AHL20(1)<---------YAB1xxxxxxxxxxxxxxxx>smallRNA(i)            <----------DOF2<--------P     xxx   tatctcaacacactatatcattagtttaaagacggagctctgttttttctttttcaactttaatcttctcctttagttcattgaggtagattttgcgtaa  8560700                                                                              xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                <---------ARR11(3)       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                        --------->KAN4(1)       <---------AGP1 <-----------TGA1                        <---------ICU4--------->AtMYB61  <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                        --------->HSFB2a(1)     --------->ARR11(3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    <-----------GT1     <---------KAN4(1)       <---------ARR14(2)    ------>MYB46(1) -ANAC55(2)             <---------HSFB2a(1)     --------->ARR14(2) <---------At4g35610 >ANAC55(2)            <------ZmHOX2a(2)       <---------CCA1(2) <---------ALFIN1 -ANAC58    --------->AHL20(2)     <---------ALFIN1    <-----------GT1------>MYB83 -ANAC46    <---------AHL20(2)  <---------ARR14(2) <----------DOF2 <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) -ANAC58  <----------DOF2--------->KAN4(2)   <---------TOE1(2) <-----------HVH21 xxxxxxxxxxxxxxxxx>smallRNA(si3)--------->ARR14(2)------>ZmHOX2a(2)--------->At4g35610  ------>NtERF2   ttcaatttgccactttaatttttggatcattccaaatccacctctcgctggatcttttttccaagcgtcaccttccatgagtatggacgatgccaacatg  8560800                                                      ------>MYB83                                                      ------>MYB46(1)                                                    xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                   xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                <---------SPL7                                               <---------ANAC58                                               <---------ANAC58                                               --------->ANAC55(2)                                              --------------->AtSPL3                       --------->YAB1                                              <---------------AtSPL8                    <---------HSFB2a(2)                                      --------->YAB1<---------MYB59                <----------DOF2  -                                --------->TOE2(3) ------->TEIL                    <---------DAG2 ----                        --------->TOE2(3)     --------------->AtSPL8     --------->YAB1 --------->HSFB2a(2)                      <-----------ARR10       <---------TOE2(3)      <xxxxxxxxxxxxxxxxxxsmallRNA(si3) <----------DOF2      ------->TEIL    --------->AHL20(2)          <-------TEIL <-----------GT1 ------   tctctttgtttgtctttggacgcgaacctcatcatcttaataatatttgacgtaccaaataacttatgtgcattttcatattcaccttttctataaaaaa  8560900                                                                              <---------AHL20(2)          --------->ATHB12                                                    --------->AHL20(2)     <---------YAB1    <-----------GT1                                      <---------AHL20(2)   --------->YAB1   --------->YAB1                                        <---------AHL20(2) -------->YAB1    <---------YAB1           ------->TEIL                   --------->AHL20(2) ----->YAB1     <---------ZAT6          --------->AtLEC2                --------->AHL20(2)         <- --->AHL20(2)  <---------YAB1  <-----------GT1            --------->TOE2(3) --------->AHL20(2)    <--   aataatcaaaattgattagtattaataaccaatttactgatcatgcatttaacaaaaaaacattagcaaaacatatatatatatataagaaaaacatata  8561000                                                            <-------TEIL                                                           <---------ANAC46                                                         <---------MYB46(3)                                                        <---------AtMYB61                                                        --------->ALFIN1        <-------MYC2          xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)            <---------DEAR3(1)      ------->MYC3        <------ZmHOX2a(1)                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       ----------->GT1                               <-----------RAV1(1)        <-------MYC3       --------->ANAC58                              <---------AtMYB61  --------->ANAC46       --------->ANAC58                        --------->MYB52(2)  <---------ZAT18    <xxxxxxxxxxxxxx --------->RAP2.6(3)      <-----------GT1    <---------MYB52(1)    --------->ZAT18   <---------TOE2(3) ---------DOF2  ----------->GT1             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    <---------YAB1 -------DAG2<---------ARR14(2)              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)------->MYC2   cctttcggcaggaaaatatggtgcaaaatcacattttttgggacagcgtttgtttttggtggtgcatagagcacaaggagcacgtttaacattgactctc  8561100              <---------ICU4              --------->ATHB51              <---------AHL20(2)              --------->AHL20(2)              <--------ATHB1             <---------ATHB51             <---------ATHB12             --------->ICU4           --------->YAB1                                                                     <------        --------->YAB1                       <------------CBF     <---------AHL20(2)      -----------     --------->TOE2(3)              <---------AHL20(2)         --------->AHL20(2)       <-----------TBP     --------->YAB1               ----------->TBP---------->DOF2  --------->AHL20(1)  --------->AHL20(2)    <-------TEIL    ----------->GT1--------->AHL20(2)      <---------ARR11(3)         <---------AHL20(2)   <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   ----------->GT1    --------->AHL20(1)      ------->TEIL xxxxxxxxxsmallRNA(si3)         --------->YAB1<---------WOX13(1)  <---------AHL20(1)<-----------TBP   gagacatccataacaataatttgtgtaaatacaactataaatttgttaattgaaagaagaatatataaaatatttcatgaagatgaatttatatataaac  8561200                                    <---------TOE2(3)                                  <---------AHL20(2)                                                <                                 <---------YAB1                                                     -                           --------->AHL20(1)                                                     <--            <---------YAB1 --------->AHL20(2)                                               ---------      <---------AHL20(1)   <---------AHL20(1)               --------->AHL20(2)              ---------      --------->ARR11(3)   <---------AHL20(2)    ----------->GT1                            <--------      --------->ICU4 ------------>CBF           <---------TOE2(3)                          --------->AHL20(2)      --------->AHL20(1)  <---------AHL20(2)    --------->DAG2--------->YAB1               <---------AHL20(2) -----GT1<---------YAB1--------->WOX13(1)---------->DOF2  <----------DOF2 <----------DOF2  --------->ICU4 >TBP <---------ARR11(3)  --------->AHL20(2)  --------->CCA1(2)  <-----------GT1           <---------ATHB51   ctttggaaaatattatcaaacttttcaattaaatttttaatgaaaaagataaggctaaaacttttaataactcgttctttttgtattttggaaataattt  8561300                                                  <---------AHL20(2)                                              --------->ATHB51                  --------->ARR11(3)    <---------YAB1                            <---------ICU4                    <---------ARR11(3) --------->GLK1(2)                            <---------AHL20(2)              <---------AHL20(2) ---------ARR11(3)                            --------->AHL20(2)             --------->AHL20(2) -------->ARR11(3)                           --------->ICU4               --------->AHL20(2) -------TOE2(3)        <-----------GT1    <---------AHL20(2)              --------->YAB1 >AHL20(2)          ----------->GT1       --------->AHL20(2)             <---------ATHB51 >AHL20(1)      <---------TOE2(3)       <----------DOF2                  <---------ATHB12     <------ -AHL20(2)  <----------DOF2    ------->TEIL--------->YAB1            ------------>CBF        <-------   gagattttgtttggctttaagtttgtaactatgtatattttgctttaattatttatacatatagactaatttccaattataaaatctataactattttta  8561400                               ----------->RAV1(1)                               --------->ORA47(1)                              <---------ETT(1)                             ------>MYB46(1)                              --------->DEAR4(1)                           ------>MYB83                              --------->DEAR3(1)                         <---------MYB59                              --------->DREB2C(2)                   --------->YAB1                              --------->At1g77200                   -------->HAHB4                      <--------HAHB4                             --------->YAB1                      -------->ATHB1                             -------->HAHB4                      --------->ATHB51                           <---------ICU4                      --------->YAB1                            <---------ATHB51                      <---------ICU4                            --------->ICU4                     <---------YAB1                           --------->YAB1     <---------ANAC55(2)<---------YAB1                       --------->AHL20(2) <-----------HVH21   <---------ATHB51      --------->YAB1    <---------AHL20(2) ---YAB1             --------->ICU4       <---------YAB1    --------->AHL20(2) <-----------GT1 --AHL20(2) ---------->DOF2  --------->DEAR3(2)     --------->YAB1 <---------YAB1<-----------GT1  ---   ttcagtcacatgaataaagaacaattattacaccgacaaatgttttcataacaacaatactatttaataatgataccaaattttcacttcatcttatatg  8561500                   <---------AHL20(2)                                  --------->TOE2(3)                  --------->AHL20(1)                                  <---------ANAC55(2)                  <---------AHL20(1)                                <-----------GT1               <---------AHL20(2)                               <---------AHL20(2)               --------->AHL20(2)                               <---------AHL20(1)              -----           <---------ICU4                                       --------->AHL20(1)              <----           --------->ATHB51             --------->YAB1          --------->AHL20(2)              -----           --------->AHL20(2)          <---------ATHB12      --------->YAB1  --------->AHL20(1)<-----           <---------AHL20(2)        --------->WOX13(1)     <---------AHL20(2)       xxxxxxxxxxxxxxxx ---->TEIL--------->ICU4         <-----------GT1           --------->AHL20(2)<---------ARR11(3)<-----   tatatttctctaattatttatatatttagactaattttccaatcataaaaactaaactatttttaataaattacctgaatatataacacatattatgccg  8561600  Previous    Next  AGI:  At2g19820.1    Description:  LBD9 (LOB DOMAIN-CONTAINING PROTEIN 9). Identical to Putative LOB domain-containing protein 9 (LBD9) [Arabidopsis Thaliana] (GB:O82198); similar to LBD5 (LOB DOMAIN-CONTAINING PROTEIN 5) [Arabidopsis thaliana] (TAIR:AT1G36000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65347.1); contains InterPro domain Lateral organ boundaries, LOB (InterPro:IPR004883) Range:  from: 8560626    to: 8561111    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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