Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->AHL20(1)             <---------ARR11(3)                                <---------AHL20(2)             <---------AHL20(1)                                <---------AHL20(1)             --------->AHL20(1)                                --------->AHL20(2)             --------->ARR11(3)                           --------->AHL20(2)          ------>ZmHOX2a(2)                 --------->AHL20(2)   <---------YAB1  <------ZmHOX2a(2)                 <---------YAB1--------->YAB1         --------->CCA1(2)                 <---------AHL20(2)--------->AHL20(2)--------->AGP1                --------->AHL20(2) <---------YAB1    <---------ARR11(3)                <---------AHL20(2) <---------AHL20(2)--------->ARR14(2)          <---------ANAC55(2)  --------->AHL20(2)    --------->ARR11(3)          --------->ANAC55(2) <---------YAB1         <---------ARR14(2)                            --       --------->ICU4   --------->ARR11(3)----------->GT1   --------->AHL20(2)     <---------AHL20(2)     <---------ICU4     <---------ARR11(3)<---------ZAT6----------->GT1        <----------DOF2    <-- <-------TEIL------->TEIL  <---------AHL20(2)        <---------AGP1   ---------->DOF2         <------   aaatacatcattatgtattttaattagattttattatattattagagtaaaaatagatctgaaaaaatatttcaaagaaaactttttatttgttttcttt  8547100                           >>>>>>>>>RAP2.2                         <---------ARR11(1)                         <---------ARR11(3)                         --------->ARR14(2)                         <---------ARR14(2)                        <---------CCA1(2)                        --------->GLK1(1)                        <---------ARR14(1)           <---------AHL20(2)           --------->AHL20(2)           --------->ARR11(3)           --------->AHL20(1)           <---------AHL20(1)                                                                 <------           <---------ARR11(3)                       <---------AHL20(2)                 <-------TEIL   ----------->GT1--------->LBD16                   --------->AHL20(2)          <---------AHL20(2) ------->YAB1    <---------HSFB2a(2)               <---------AHL20(2)       <---------------AGL15   - -------YAB1     --------->HSFB2a(2)            <---------AHL20(2)    --------->AHL20(2) ------->TEIL ----DOF2 --------->AHL20(2)                   <---------AHL20(2)<---------ATHB12---------->DOF2    <   atcatatgtaaaatatattccagagcatatctaaaacatagacacattttttatttatttatgttctatcatttaaaactatataaagatgcacattttt  8547200                                                                                       <----------DOF2                                                                                    <---------YAB1                                                                                 <---------YAB1      <---------CCA1(1)                                                        <---------AHL20(2)      <---------RVE1(1)                 --------->AHL20(2)                    --------->AHL20(2)     --------->ARR11(3)       <---------YAB1                                  <---------AHL20(2)     <---------ARR11(3)     --------->YAB1                                 <---------AHL20(2) ---AHL20(2)                <-----------GT1                               <---------AHL20(2)<-------- -------->HSFB2a(2)     <---------AHL20(2)                             <---------AHL20(2)   <-------- ---------HSFB2a(2)    <---------AHL20(2)      ---------->DOF2         --------->AHL20(2)  ----------   ttcgagagatattttgtttttgttttttatttatcatttagataaattgaaaagataacatccaattagacatttttttatttattattctttggcttct  8547300                                                                    --------->TGA1a                                                                    =================bZIP_DOF                                                                    <---------TGA1a                                                                    <---------O2                                                                    --------->O2                                                                  <---------ALFIN1                                                                ------>NtERF2                                                                --------->ATERF1(1)                                                                <------NtERF2                                                               <---------ATERF1(1)                                                               --------->RAP2.6(2)                                                               <---------RAP2.3(1)                                                      --------->ARR11(3)                                                   --------->AHL20(2)                                                   <---------AHL20(2)                                                ------->TEIL   ------>NtERF2                     ------->GAMYB      <---------AHL20(1)    <---------DEAR3(1)                     ----------->HVH21  --------->AHL20(1)    <---------RAP2.6(2)                  --------->MYB52(1) --------->AHL20(2)      --------->ATERF1(1)       --------->AHL20(2) -ANAC58       --------->YAB1       <---------AHL20(2)--------->AHL20(1)               <---------YAB1 -ANAC58   ---------->DOF2          --------->AHL20(2)<---------AHL20(1)            <---------YAB1 >ID1   --------->AHL20(2)         --------->AHL20(2)<---------AHL20(2)   <----------DOF2   tcttactgaattaaaaagaataactgacctctaacaaattaatatatatgtatatatatattgggcggccacttgactttcccattcttataaataacat  8547400                     <---------ICU4                  --------->YAB1                                                     ------------>CBF                  --------->TOE2(3) <---------ICU4                                   <------ZmHOX2a(2)             <---------DAG2     <---------AHL20(2)                                 --------->WOX13(1)             <----------DOF2   --------->AHL20(2)                            <------------CBF     <--       --------->TOE1(3)  <---------ANAC55(2)       --------->AHL20(2)    ------------>CBF        <--       --------->TOE2(3)--------->AHL20(2)          <---------AHL20(2) ----------->HVH21  <---------ICU4   atatcaaaacattaactttatcttaattacatataaaatcatttctatccatgttttaatatactaattctctgtgaccaattgtcgatcaatactgact  8547500                                                                 <---------ANAC58                                                                 <---------ANAC58                                                                 <---------ANAC46                                                              <---------CCA1(2)                                                       ------>ZmHOX2a(2)                                                      <------ZmHOX2a(2)                                                     --------->ARR11(3)                                                     <---------ARR11(3)                                                     --------->ARR14(2)                                     ------------>CBF<-----------ARR10        --------->ZAT6             --------->ZAT6    <---------ARR14(3)   --------->YAB1             --------->YAB1         --------->ARR14(3)        --------->ANAC58 -------TOE2(3)               <---------ICU4         <---------ARR14(2)        --------->ANAC58   <-- -------YAB1             <---------YAB1*TSS        ----------->ARR10       --------->GLK1(2)    -----   aagattaataacactaattctctcactatgaataataacaccaattctctgtgaagatcttcttgtagcttgttgagaatcaagctattgtgaccaatgt  8547600                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   <-           <---------ETT(2)                                                                   ------>ZmHOX2a(1) -------SPL7   ------>NtERF2                                                    <---------ANAC58----- ---->ALFIN1  --------->ANAC46                         --------->ALFIN1         <---------ANAC58-----   ggaacggtttcgatcgacgacatctctgtgatacaactatatgccaagtttgtaagggtggagaagaaacaatacttcatttgcttagggattgtcctat  8547700            <---------AHL20(2)            --------->AHL20(1)    <------MYB46(1)    <------MYB83    ----------->GT1    <---------ANAC46    <---------ANAC58    <---------ANAC58   --------->MYB55(2)   <---------MYB46(3)                                                               ----------->GT1  <---------MYB55(1)             >>>>>>>>>E2Fc                                 <---------MYB46(3) <---------MYB52(1)              >>>>>>>>>E2Fd                                <--------P --------bZIP60(2)              --------->LBD16                             <---------MYB46(3) --------ANAC46                --------->ANAC58            ---------->DOF2 <---------AtMYB61 --------ANAC58                --------->ANAC46      <---------ANAC58    <---------ANAC58 --------ANAC58                --------->ANAC58      <---------ANAC58    <---------ANAC46 ------>TGA1<---------AHL20(1)<---------LBD16     <----------DOF2        <---------ANAC58      ------ ------>HVH21  ----------->HVH21------>NtERF2 <---------GLK1(2)         --------->ATHB12     <-------   gacgttgggtataatatatgacagcgtttaatcccgccaaataagcttgattctttcttgtcaaagtcgctacttgagtggttgttttgtaacttaggtg  8547800                                                           <--------P                                                          <-------GAMYB               <------MYB83                                                         <---------MYB46(3)           <------MYB46(1)                                                  --------->ALFIN1                    <---------ANAC58                                                <---------O2                          <---------ANAC58                                   <---------AtLEC2    <------NtERF2                 <---------MYB46(3)                                   <---------ANAC46   <---------MYB46(3)             --------->MYB46(2)                                   <---------ANAC58  <---------ANAC46                --------->MYB111(1)                                   <---------ANAC58  --------->ALFIN1                --------->MYB111(2)                           --------->ETT(2)     --------->ANAC55(2)                  <---------AtMYB61      --------->MYB52(2)<---------MYB46(3)      --------->O2                 --------->YAB1 --------->ALFIN1      <---------ZAT6           <---------ANAC58            <---------ATHB12   ------ --->ALFIN1          --------->MYB52(2)         <---------ANAC46            <---------ATHB51  ------- --ANAC46    --------->ANAC46  <----------DOF2  <---------ANAC58            --------->ICU4   <-------   gaagtggtgagttacacataagttagtggtcgactttgcatggaacggctacgtggtgggggttgaaatggcgatgcaataatgtgtttggtgctccagg  8547900                 ----------->GT1                 --------->MYB52(1)                 <---------MYB46(3)            <---------MYB52(2)                <---------DEAR3(1)        <---------ARR14(2)               --------->ZAT18            --------->ARR14(2)                    --------->ANAC46               <---------ZAT14        <------NtERF2                     ----------------->AGL1               <---------ZAT18       ------>NtERF2                      <-----------------AG      <---------ZAT6<-------TEIL     --------->LBD16                    <-----------------AGL1 --->LBD16    --------->ALFIN1      <---------ANAC46     --------->TOE2(3)   --------->ARR14(2) -->LBD16   <---------ANAC58        <---------LBD16--------->ANAC58   <---------WRKY18(1) ----RAV1(2)<---------ANAC58       <---------LBD16 --------->ANAC58  ----------->HVH21   gaaatgtagagatagagtgcggttcataaatgacattgccggggtattcactaacgcattcttagccatggatgaccggtataggcaaggggaaagaatt  8548000  Previous    Next  AGI:  At2g19803.1    Description:  transposable element gene. pseudogene, hypothetical protein Range:  from: 8547539    to: 8548072    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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