Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------->AHL20(1)                                           <---------WRKY12                    --------------->AGL15<                                       <---------MYB46(3)        --------->GLK1(1)                  -                                      <---------ATHB12           <---------GLK1(1)<---------YAB1   <- ----GAMYB                         <---------WRKY38(1)        --------->ICU4   <---------------AGL15< -NtERF2      --------->YAB1 <---------ANAC58     <---------AHL20(1)          --------->TOE2(3)    -- ->ID1------>NtERF2          <---------ANAC58     <---------ARR11(3)  ------>ZmHOX2a(1)         <----   gttgtcgatgccaaaatcatgttttttttgtgcgtagtcaatggttcaacgatatattttagtaatgaattcctataatttcttaaaattgcaaaccaat  8533900         --------->ANAC46      <---------ZAT14      <---------ZAT18      --------->ZAT14 -----------TGA1                   --------->TOE2(3) -------->TOE2(3)                ------>NtERF2 --------bZIP60(1)            <---------ANAC58 <---------ZAT18                  --------->LBD16 -----------HVH21             <---------ANAC58 --------->ZAT18           <----------DOF2 ------->bZIP60(1)       <----------DOF2  <---------YAB1                 <---------DAG2       ------- -----ATHB12             <---------DAG2<---------YAB1                <-------TEIL            <-------   aacgtcagtacacataaataccatgggcttttcggtgccttaatattagtgggcttatataggcagaaacatacacttttcccccaaaactagttttgat  8534000                                                                                     --------->WRKY12                                                                                     --------->WRKY38(1)                                                                                     --------->WRKY45                                                                                    --------->DOF5.7(2)                                                                                   <-------GAMYB                                                                                  --------->MYB52(2)                                                                                  <---------MYB46(3)                                                                              --------->LBD16                                                                             <---------ANAC58                                                                             <---------ANAC58                                                                             <---------ANAC46                                                                            <---------LBD16                                                                          --------->TOE2(2)                                                                          --------->TOE1(2)                                                                         <---------HSFC1(2)                                                                         ----------->RAV1(2)                                                                         --------->HSFC1(2)                                                                         <---------HSFB2a(1)                                                                         --------->HSFB2a(1)      <----------DOF2      --------->ZAT18                             <---------ARR14(2) -->YAB1                   <---------ZAT18                             --------->ARR14(2) --YAB1               <---------YAB1  --------->WOX13(1)              <------ZmHOX2a(1)   aacatgggcttttcaatgtttaatattagtgggcttatatcaatctaatgaaatttgaagagaagagagagaggaacctgcgggtcgttgactcgttgta  8534100                                                 --------->YAB1                                   ---                                   <---------AHL20(2)                                           <----                                   --------->AHL20(2)                                           <----                                  --------->AHL20(1)          ------->TEIL------>NtERF2       <------           ---------->DOF2        <---------AHL20(2)         <---------AtLEC2                <-------    ------>NtERF2                 --------->AHL20(2)       --------->AtLEC2      ---------->DOF2<----  <---------RAP2.6(2)             <---------AHL20(1)  <-----------GT1 <-----------GT1     <---------ICU4   tgtttcggcccatataagcccagtattaactgaaaataaaattagtttttttcatattaccatgcatgtttttttcggcccatataagcccaatattacc  8534200                                                            --------->O2                                                            <---------ANAC55(1)                                                            <---------ANAC55(2)                                                            <---------ANAC46                                                            <---------ANAC58                                                            <---------ANAC58                                                            --------->ANAC55(2)                                                            <---------TGA1a                                                            --------->TGA1a                                                            <---------bZIP60(2)                                                            <---------O2                                                           <-----------------------TaNAC69(2)                                                           ----------->bZIP911(2)                                  ----------->GT1          ----------->STF1                                ======================================bZIP_DOF                ------- ------>AtLEC2                  ---------->DOF2            ----------->bZIP910(1)             ------- -----ANAC58             <---------AHL20(2)               <---------TGA2(2)                  -------- -----ANAC58        <---------AHL20(2)                   ----------->HVH21                >>>>>>>>>TBF1 ---At5g28300      <---------AHL20(2)             --------->ZAT14  ------>ZmHOX2a(1)   >>>>>>>>>TBF1 ----GT1<-----------GT1 --------->AHL20(2)        <---------ZAT14 <---------MYB59    ---------------- -----ANAC46       --------->AHL20(2)   <------------CBF ----------->TGA1           >>>>>>>>>TBF1   gtgcaagttttttcttattttttaaattttatctgaaagtaaaattgaacagagtaccgatgacgtgtcctaactcccaagtagaagaagaagaagaagt  8534300                    ---------->DOF2                --------->CCA1(2)               --------->ARR11(3)               <---------AGP1               <---------ARR14(2)               --------->ARR14(2)               <---------ARR11(3)               --------->AGP1              --------->RVE1(1)      ------->TEIL                                            <-------TEIL             *TSS------>ZmHOX2a(2)   --------->ARR14(2)                                   ----------- ----------------->ANAC81            <---------ARR14(2)                                  <---------TOE2(3) ---->GT1  ---------->DOF2      --------->MYB52(1)                                       <---------TOE1(3) ---------------->ANAC81    --------->AHL20(2)                                           --------->DAG2 -------->ANAC81<------ZmHOX2a(2)    --------->GLK1(2)                            ----------->GT1   aaaaaaaaaaaaaaaaagatctgaaagaaataaaaaacgaatcggaagagagagagagagagagagattggagctagttggagatgggaataaggttcat  8534400                                                                          --------->HSFB2a(2)                                                                          <---------HSFB2a(2)                                                              <---------ARR14(2)           --------->ANAC46                                   --------->ARR14(2)           --------->ANAC58                       <---------ZAT18     <---------ZAT18         ------- >GT1      --------->ANAC58               <---------YAB1     <------ZmHOX2a(1)              ---------   attgatggtgaacaagcaaggccagactcgtcttgctcagtactacgaatggctcactctcgaggaacgtcgcgctctcgaaggcgaaatcgtccgtaaa  8534500                     <-----------HVH21                 -------->P                                                    ======================                 ------>MYB83                                                  ------>ZmHOX2a(2)                 ------>MYB46(1)                                         =============HOX2a_HOX2a                ----------->RAV1(1)                                      ------>ZmHOX2a(1)                --------->MYB52(1)                                <---------GLK1(2)          --------               --------->AtMYB61                                =====================HOX2a_HOX2a              --------->MYB46(3)                                ======================HOX2a_HOX2a           --------->DEAR3(1)                                   ------>ZmHOX2a(1)         --------->YAB1           <---------MYB52(2)                                   <---------YAB1<------ZmHOX2a(2)      --------->ANAC58                                        ----------->RAV1(2)       <---------WOX13(1)      --------->ANAC46                                    ======================HOX2a_HOX2a  <-------      --------->ANAC58              <----------DOF2       ------>ZmHOX2a(2)  <---------ARR14(2) -->ARR14(2)------->GAMYB     ------>ZmHOX2a(1)           =============HOX2a_HOX2a ---------->ID1 >LBD16    --------->MYB46(3) ===================================HOX2a_HOX2a --------->ARR14(2)   tgcctcgctcgcaacgaccaacaggtcccttcctcactcttttcttcaatttctattagatcgctcctgattctcctccgatctcgtctcattgatatct  8534600         ------>ZmHOX2a(1)        --------->TOE2(3)                            ------>ZmHOX2a(2)     ------>ZmHOX2a(2)                        --------->CCA1(2)          <-----------GT1    <---------GLK1(1)                        <---------ARR14(2)   <------MYB46(1)   --------->ARR11(3)                    ------>ZmHOX2a(2)        ----------->GT1   <---------ARR11(3)                  <---------ARR11(3)         <------MYB83 ===============HOX2a_HOX2a            --------->ARR11(3)     <----------DOF2  --------->HSFB2a(2) ->ARR11(3)                            <---------ARR14(2)------>ZmHOX2a(2)     <---------HSFB2a(2) --ARR11(3)                 <---------GLK1(2)--------->ARR14(2)  --------->MYB59    --------->AHL20(2)   attttgatctccttagttttgatatttttggattcttagatgatctggatatggatcgatcgggcattaggtttattacttctcgataaatttgggaatc  8534700                                                  <---------ANAC58                                                  <---------ANAC58                                                  <---------ANAC46                                              <---------HSFB2a(1)            --------->ATHB12                                              <---------HSFC1(2)           ------>MYB83                                     <----------DOF2                       ------>MYB46(1)                                    <---------ARR14(2)                     <<<<<<<<<<<<<<<<<LFY                                    --------->ARR14(2)                   <---------MYB46(2)                                  --------------->AGL15                  --------->DEAR4(1)                                  <---------------AGL15                  --------->DREB2C(2)                                 ----------------->AG                    --------->MYB46(3)                      <---------WOX13(1)      --------->HSFC1(2)         <---------MYB55(2)               --------->GLK1(2) <-----------------AGL2                  --------->DEAR3(1)               --------->ARR11(3)<-----------------AGL1   --------->ALFIN1--------->ORA47(1)              <---------GLK1(1)  ----------------->AGL1   ----------->HVH21>>>>>>>>>>>>>>>>>LFY              --------->GLK1(1)  <-----------------AG  <---------ANAC46 --------->DEAR3(2)       <-----------RAV1(1) <-------TEIL       --------->HSFB2a(1)     <-----------GT1   gaagtaattttgttggaaatctagattgatacatagccgattttgggaaatttcgtagcggtgatgcataaatcaccgaccattggctaattggattcaa  8534800  Previous    Next  AGI:  At2g19790.1    Description:  clathrin adaptor complex small chain family protein. similar to clathrin coat assembly protein, putative [Arabidopsis thaliana] (TAIR:AT1G47830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65419.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Clathrin adaptor, sigma subunit/coatomer, zeta subunit; (InterPro:IPR000804); contains InterPro domain Adaptor protein complex, sigma subunit (InterPro:IPR016635) Range:  from: 8534313    to: 8535615    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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