Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           <---------ICU4                        <---------YAB1        <---------------AGL15        --------------->AGL15                                                                       <        <---------MYB59<-----------GT1                        <------MYB83                          <       <-----------------AGL2                                 <------MYB46(1)                     ---       <-----------------AGL1                                <---------------AtSPL3              <---       ----------------->AGL2                                <---------------AtSPL8            ------       <-----------------AGL3                                --------->MYB59                   ------       ----------------->AGL3                                --------------->AtSPL8         ---------       --------->ANAC55(2)                                --------->ARR14(2)          ---------------       ----------------->AG                               <---------GLK1(2)           <----------DOF2       <-----------------AG      <---------TOE1(2)        <---------ARR14(2)         ------>ZmHOX2a(2)       ----------------->AGL1    <---------TOE2(2)   --------->MYB52(1)            <---------ARR11(3)      -------->P      --------->YAB1                 ----------->RAV1(1)           --------->ARR11(3)   tgatcacttacctattttggtcatttatcatttcttatgttttaagttctatagacaacagatttggtactactcatacgagtttgatctttttgtgacg  8521600                                                                                                <----                                                                                                <----                                                                                                <----                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                              <------                                                                                              <------                                                                                            <------MYB46(1) --------->ZAT14                                                                            <------MYB83 ----------DOF2           --------------->AtSPL8                                           --------->MYB111(1) ---------DAG2            --------------->AtSPL3                                           --------->MYB46(2) ---->TEIL             <---------GLK1(2)                                                 <---------MYB52(1) ------ALFIN1    <----------DOF2                                                  <---------ALFIN1 --->ANAC58  --------->YAB1                                                    --------->ANAC46<----- --->ANAC58 <---------ATHB12            <----------DOF2                        --------->ANAC58------ -->HVH21 --------->WOX13(1)     ----------->HVH21  <-------GAMYB              --------->ANAC58------ -------->TaNAC69(2) <---------YAB1   ----------->GT1    <---------ANAC46 ----------->ARR10--------->MYB59   cactttacttcgcaatcatctttctgattctgtaccagaccggtttattgtctgggttgaagtgtaacgaattggtttgatactccacattgttaggttg  8521700 <---------ANAC46 -----MYB46(3) --MYB46(1)                                                                           <---------AHL20(2) --MYB83--------->YAB1                                                                <-----------GT1 ----AtMYB61                                                                       <---------ICU4 --->MYB46(2)                                                                     --------->AHL20(2) --->MYB111(1)                                                                   <---------ARR11(3) ----DEAR3(1)                                                                    --------->AHL20(1) --->MYB111(2)                                                                   --------->ARR11(3) ---MYB55(1)              ----------->ARR10                                <------ZmHOX2a(1) --P   <---------YAB1     ----------->GT1       <---------AHL20(2)        ----------->GT1 ----MYB46(3)          ----------->GT1         --------->AHL20(2)        <---------TOE1(3) --->MYB55(2)      ---------->DOF2       <-------TEIL           <---------YAB1   <---------AHL20(1) --->ALFIN1<---------ICU4<--------P ---------->DOF2  ---------->DOF2     <---------TOE2(3)   gtggagtttatcataactactaaaagggtagataatccaaaagtccatataaaatcaaagagtattacaaatgttaaggaaaaaatatttacttatgttc  8521800                  <----------DOF2                  <---------DAG2             --------->LBD16            --------->ANAC58            <---------ANAC55(2)            --------->ANAC46            --------->ANAC58           <---------LBD16       <---------AHL20(2)      --------->AHL20(2)   --------->AHL20(2)   <---------AHL20(2)  --------->AHL20(1)                                                               ----------->GT1  <---------AHL20(1)                                                    --------->AHL20(2)  <---------AHL20(2)                     ----------->GT1      --------->AtMYB61   --------->DAG2  --------->AHL20(2)  <-----------GT1 --------->ALFIN1  --------->AtMYB61        ---------->DOF2    -   taaataaaattaatccgcaactttttactgaagtttcaatgtgttgaaaaacttgaaaccaaaaccaaaaccaatttcataaataaagttattcgaaaac  8521900                                                                           ------------>CBF        <---------AHL20(2)                                                --------->ANAC58        <---------AHL20(1)                                       <---------ALFIN1        --------->AHL20(2)        --------->AHL20(2)                                    --------->ANAC46   --------->ANAC46        --------->AHL20(1)                                  --------->ANAC46    --------->RAP2.6(3)    <---------AHL20(2)                                      --------->ANAC58  --------->ARR14(2) <---   <---------YAB1       <---------------AGL15               --------->ANAC58  <---------ARR14(2) ---- <---------ICU4      ----------->HVH21---------->DOF2 ------------>CBF    --------->ANAC58---------->DOF2 -------->ICU4---------->DOF2---------->DOF2    --------->AHL20(2)        <-----------------AGL1<----   taatttttattttattgaaagcgatgacaaaaaaagaaattaaggcccatttaaaactcaatacgccccatttgaaacccaatacggcccattaaagagg  8522000                                             --------->ANAC58                                     --------->ANAC58                                     --------->ANAC58                         --------->LBD16 --------->ANAC46              ------->GAMYB                        --------->HSFB2a(2)  --------->ANAC58         --------->MYB46(3) ------ARR14(2)         --------->ANAC46 --------->ANAC58             <---------MYB55(2)         ---- ----->ZAT18   --------->At5g28300  *TSS --------->ANAC58           ----------->RAV1(1)         <---- --ZmHOX2a(1) ----------->GT1 --------->TOE2(3)               <---------ATERF1(1) --------->At4g35610   accctaatataaacgactgtaaatttccgaaaccctagtaagcaagcaagctatcgagcatcgtcgtctccaacagccaagagaagcagaagcttgaaga  8522100                                          ---------->ID1        --------->TOE2(3)    ------>ZmHOX2a(1) ------>ZmHOX2a(1) ----->GLK1(2)    ----------->GT1 <----------DOF2                        <<<<<<<<<TBF1 -----GLK1(2)    ----------->GT1  <---------DAG2  <---------YAB1    <---------GLK1(2)   atctctgtaatctaaaaaatgggtaattctcctatactttttttgtctccttatgcttctacctattgctgattcttcttcaacaatgttgttcatgttt  8522200                                                                 --------->DAG2                                                              <---------MYB52(1)                                                             --------->LBD16                                                             <---------RAP2.6(3)                                                        <-------PIF5                                              <-------TEIL  <---------ATERF1(2)                                          --------->ANAC46  --------->ATERF1(2)                                       <---------WRKY38(1)  <---------ANAC46                                       <-------TEIL     <-------MYC3                                   --------->DAG2       ------->MYC3                                 ---------->DOF2        ------->PIF5                      --------->WOX13(1)<---------ALFIN1<-------MYC2            --------->ATHB12    <------ZmHOX2a(1)       ------->MYC2            <--------ATHB1     --------->ANAC58        <---------ANAC58               --------->DAG2           --------->ICU4      --------->ANAC58      <---------ANAC58                ---------->DOF2           <---------YAB1     <---------TOE2(2)      <---------ANAC58             --------->ANAC58          <---------WOX13(1)  <---------TOE1(2)--------->ATHB12<--------P         --------->ANAC58     <----------DOF2<---------ATHB12   <---------WRKY12<---------ANAC58   <-----------HVH21         <   tgtttctctttgaatgattgtaatcaatctcgcaggaaaggtccacggttcattggctcgtgccggtaaggtgagaggtcagacacctaaagtggctaag  8522300                                                                   <---------LBD16                                                                  ------>NtERF2                                                                 --------->DEAR3(1)                                                                --------->ATERF1(1)                                                                --------->DEAR3(2)                                                               <---------At5g28300                                                            <-----------TGA1                                                            <-----------HVH21                                                           <---------ANAC58                                                           --------->bZIP60(1)                                                           <---------ANAC58                                                           <---------bZIP60(1)                                                        <---------MYB52(1)                        <---------ANAC58           ------->GAMYB--------->MYB46(3)                  --------->O2                     --------->DEAR3(1)          <----------DOF2                  <---------O2                    <------------AtMYB77     <-----------GT1              <---------HSFB2a(1)                 <---------MYB55(2)  <---------MYB52(1)              <---------HSFC1(2)                  --------->MYB46(3) --------->LBD16              --------->HSFC1(2)                  --------->DEAR3(2)--------->ATERF1(2)     ---------         >>>>>>>>>TBF1  <---------ANAC58        --------->MYB52(1)--------->ABI4(1)  <----------DOF2 ------ZmHOX2a(1) <---------ANAC46         ----------->RAV1(1) <---------ATERF1(1)   ----------------   caggacaagaagaagaagcctcgtggtcgtgctcataagcgtctgcaacacaaccgccgtttcgtcaccgccggtatttagcttttactttgaaattctc  8522400                                                                   --------->MYB52(2)        <-------                                                                 ================================HOX2a_HOX2a                                                                 ------>ZmHOX2a(1)<---------AHL20(2)                                                                --------->TOE2(3)<----------DOF2      <---------YAB1                                     ===============HOX2a_HOX2a        --------->TOE1(2)   <---------YAB1                                        ------>ZmHOX2a(2)   <---------TOE2(3)     -- >GLK1(2)                              <---------YAB1   <------ZmHOX2a(2)    <---------TOE1(3) <----- ----->WRI1               <---------CCA1(2)             ================HOX2a_HOX2a       ------>ZmHOX2a(2)   ggtgtatgattcttatatcgattaatccatctcttaatttgataattctaagtctgagatcgctctccttagttgaattagggttttattgatcgtagga  8522500  Previous    Next  AGI:  At2g19740.1    Description:  60S ribosomal protein L31 (RPL31A). Identical to 60S ribosomal protein L31-1 (RPL31A) [Arabidopsis Thaliana] (GB:Q9SLL7); similar to 60S ribosomal protein L31 (RPL31C) [Arabidopsis thaliana] (TAIR:AT5G56710.1); similar to 60S ribosomal protein L31 (RPL31B) [Arabidopsis thaliana] (TAIR:AT4G26230.1); similar to 60S ribosomal protein L31 (GB:P46290); contains InterPro domain Ribosomal protein L31e; (InterPro:IPR000054) Range:  from: 8520595    to: 8521601    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g19750.1    Description:  40S ribosomal protein S30 (RPS30A). Identical to 40S ribosomal protein S30 (RPS30C) [Arabidopsis Thaliana] (GB:P49689;GB:O82203;GB:Q9M0E4); similar to 40S ribosomal protein S30 (RPS30B) [Arabidopsis thaliana] (TAIR:AT4G29390.1); similar to 40S ribosomal protein S30 (RPS30C) [Arabidopsis thaliana] (TAIR:AT5G56670.1); similar to Os06g0172600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056941.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65408.1); contains InterPro domain Ribosomal protein S30; (InterPro:IPR006846) Range:  from: 8522036    to: 8523220    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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