Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                -------                                                                                       <---------YAB1                                                                                       ------>ZmHOX2a(1)                                             <----------DOF2                           --------->ICU4                                            <---------ANAC46              <----------DOF2  --------->YAB1            <---------GLK1(2)               <---------ANAC58          <-----------GT1 --------->TOE2(3)            --------->ARR11(3)              <---------ANAC58 ---------->DOF2        <---------YAB1        ---------->DOF2                <---------MYB46(3) --------->YAB1  <---------DAG2  <---------YAB1 ---MYB52(1)<---------ARR11(3)    <---------AHL20(2)      --------->TOE2(3)    --------->YAB1<-------   tttttgaagtaaaagattttgttgaacaggttttatttaagttgttgctttgaagttgaaccataatgctattctcctttttcattatccttattataaa  8520200                                               <-----------GT1      <-----------GT1        --------->ARR11(3)                                            <---------ZAT6      ------>ZmHOX2a(1)    --------->TOE2(3)                                     <---------ZAT18            <----------DOF2   <----------DOF2                                    <---------ANAC46          ------>ZmHOX2a(2)  --------->HSFB2a(1)                                    <---------ANAC58         <------ZmHOX2a(2)   --------->HSFC1(2)                                 <-----------RAV1(1)        --------->AGP1<---------ATHB12 <---------ARR11(3)                      <---------ANAC58  <---------ANAC58    <---------ARR14(2)   <---------HSFC1(2)                      <---------ANAC58  <---------ANAC58    --------->ARR11(3)   <---------HSFB2a(1) --->DOF2           <---------YAB1  <---------ANAC58        <---------ARR11(3) <---------ARR11(3) --YAB1    --------->ARR11(3)   <---------ANAC46            --------->ARR14(2) --------->ARR11(3)   ggagttagaagtttatcttgttatgcttgatgtttctggtgtgcttgtgttacattttgttagatccttttatcgaatcaagaactttcttaaaatctct  8520300                                               --------->AHL20(1)                                               <---------AHL20(1)                                           ------>ZmHOX2a(1)                                    ------->GAMYB                                  --------->ANAC58                                  --------->ANAC58            ---------->DOF2       <---------AHL20(2)        ------->GAMYB<---------CCA1(2)                            --------->TOE2(3)       --------->AHL20(2)       <---------MYB111(2)      <----------DOF2     <---------------AGL15    <---------GLK1(2)           --------->MYB46(3)   <---------YAB1--------->TOE2(3)      --------->YAB1    <---------ARR11(3)          <---------MYB55(2)<---------AHL20(2)         --------------->AGL15   attctagattttattagcaaatcaaatgtaatcaacaaccaagtccttatatattatgacttttgaaagcctaaattgactcaaaatagcaaacataaat  8520400                                                                           -------->P                                          <---------ICU4                   ------>MYB83                                         --------->ICU4      ------>ZmHOX2a(2)                                        <---------TOE2(3)   <------ZmHOX2a(2)      <---------MYB46(3)               --------->YAB1      --------->ARR11(3)      <---------GLK1(1)      <-----------RAV1(1)       <---------ZAT18            <---------ARR11(3)      --------->GLK1(1) ----------->ARR10              --------->ZAT18     <---------YAB1         ------>MYB46(1)   gtttagatttgttgcatcaaatgtgatgttcttgtggactataatgttgacattttcattagatcccatcaaaaaccaacttgagaattccatcttagca  8520500                                                            ----------->GT1                                                           --------->DAG2                                                         ---------->DOF2                                                      --------->ANAC58                                                      <---------ANAC55(2)                                                      --------->ANAC46                                                      --------->ANAC58                                                      --------->ANAC55(1)                                                     --------->SPL7                                   --------->ANAC46 --------->MYB52(1)       <---------ANAC46  *TSS                     <-----------HVH21             <---------SPL7      <---------TOE1(3)  <---------AHL20(2)              ---------->DOF2     --------->RAP2.6(3)<---------LBD16   <---------TOE2(3)  --------->AHL20(2)   tgctctatacttatccaaaagcccatcaggcccatagacggcccaacttatagcatacggaaaggtttatattagggtttcttagacatgaattaattct  8520600                      <---------ALFIN1                    ----------->RAV1(1)              <---------RAP2.6(3)              <---------ATERF1(1)                --------->ANAC58                        ----------->HVH21             --------->RAP2.6(2)                 --------->ANAC58          ---------->DOF2         --------->ALFIN1                    <------ZmHOX2a(2)    ---------->DOF2      <---------ANAC58       <-----------RAV1(1)                 --------->GLK1(1) ---------->DOF2           <---------ANAC58   gttctcttgctgtggccgtctccaacaccatttcgaagaccagggagatcgaagcaaaatggagaaaggaaagggaagaaaggaagaggtcgtgaccagg  8520700                                  ----------->GT1                         ------>NtERF2                        --------->RAP2.3(3)                        --------->RAP2.3(2)                        --------->DEAR3(1)                       --------->ATERF1(1)                       <------NtERF2                       --------->RAP2.3(1)                       --------->ERF1                      ------>NtERF2                                                          <-------                      <---------RAP2.3(1)                                                    <-------                      <---------ATERF1(1)                                               <---------MYB52(1)               <---------ALFIN1 <---------ANAC46                                      <---------ANAC58         --------->WOX13(1)    <---------ZAT2                                         <---------ANAC58 --------->ZAT18     --------->RAP2.6(2)                        <---------MYB59    --------->ARR14(2) <---------ZAT14    --------->RAP2.3(1)                         --------->TOE2(3)  <---------ARR14(2) <---------ZAT18   <---------ATERF1(1)      ---------->DOF2   ---------->ID1--------->ARR11(3) --------->ZAT14 <-----------RAV1(2)      --------->TOE2(3)  <-----------GT1<---------ARR11(3)      <   gagtacactatcaatctccacaggcgcctccatagctggtaaaacctaaagcttcaatacttttgaccttatttgcaatatctcgtttccgttttgctta  8520800                       -------->HAHB4                       --------->ATHB12                       --------->YAB1                                  <---------YAB1                       <---------ICU4                        <------MYB46(1)                      --------->ICU4                         <------MYB83      <---------HSFB2a(2)                                   --------->MYB59 --ANAC58             <---------ATHB12                      <---------TOE2(3) ---------->DOF2       < --ANAC58             <---------YAB1              --------->ATHB12<---------ANAC58               ---- -------TEIL         <---------TOE2(3)           --------->ICU4   <---------ANAC58              <----   agttcgttctgggcatagagtctaatgattagactaaaattgcaacttgtattgattcgaattaggtttcttgatgaatgaaaagagttagaatatttga  8520900                                              ------>ZmHOX2a(2)                                             <------ZmHOX2a(2)                                             <---------GLK1(1)                                             --------->GLK1(1)                                            <---------ARR14(3)                                            <---------ARR11(3)                                            --------->ARR11(3)                                            --------->ARR14(3)                                            --------->ARR14(2)                                            <---------ARR14(2)                                           --------->RVE1(1)                                        ---------->DOF2                                     --------->YAB1                                    <---------YAB1                                   --------->ARR11(3)                                   <---------ARR11(3)                                  -------->HAHB4                                  <---------ICU4                                  --------->YAB1 ----------DOF2                  --------->ICU4       <---------MYB46(3) --->TEIL                        <---------YAB1   ------>ZmHOX2a(1)                <----------DOF2 -----CCA1(2) <---------YAB1 XXXXXXXXXXXXXXXXXXXX>MIR823 <---------MYB46(3)     ------->TEIL   atctttgttgaaaattttgattctgtagatgagtaatgatcataaagatctcctagttgttgttgatcaccttggctccttgcatctttgtctaaatttt  8521000                                                    <---------ANAC46                                                 ---------->ID1                                               <---------MYB46(3)                                             <---------ANAC46                                             <---------ANAC58                                             <---------ANAC58     <---------TOE2(3)       <---------YAB1                                           <------MYB46(1) <-------TEIL            <-------GAMYB                                           <------MYB83--------->MYB59          <-----------GT1                                         <--------P <---------ANAC58        <---------DAG2--------->ICU4       ----------->GT1 <----------DOF2--------->DAG2<---------ANAC58        <----------DOF2  <-------   agtttaaaatggagaaattagactccttttattgtatagaaaggttggcttgttgcttaggtacattttagattagagcttttttcgttgtcaagattga  8521100  Previous    Next  AGI:  At2g19730.1    Description:  60S ribosomal protein L28 (RPL28A). Identical to 60S ribosomal protein L28-1 (RPL28A) [Arabidopsis Thaliana] (GB:O82204); similar to 60S ribosomal protein L28 (RPL28C) [Arabidopsis thaliana] (TAIR:AT4G29410.2); similar to 60S ribosomal protein L28 (RPL28C) [Arabidopsis thaliana] (TAIR:AT4G29410.1); similar to unknown [Populus trichocarpa] (GB:ABK92708.1); contains InterPro domain Ribosomal protein L28e; (InterPro:IPR002672) Range:  from: 8518592    to: 8520303    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g19740.1    Description:  60S ribosomal protein L31 (RPL31A). Identical to 60S ribosomal protein L31-1 (RPL31A) [Arabidopsis Thaliana] (GB:Q9SLL7); similar to 60S ribosomal protein L31 (RPL31C) [Arabidopsis thaliana] (TAIR:AT5G56710.1); similar to 60S ribosomal protein L31 (RPL31B) [Arabidopsis thaliana] (TAIR:AT4G26230.1); similar to 60S ribosomal protein L31 (GB:P46290); contains InterPro domain Ribosomal protein L31e; (InterPro:IPR000054) Range:  from: 8520595    to: 8521601    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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