Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <---------DAG2        --------->At4g35610                                                            <----------DOF2       <---------ANAC55(2)                                                           <---------DAG2       <-----------RAV1(2)      ----------->GT1   --------->YAB1                  <-----------GT1    ------------>CBF ---------     ----------->GT1 *TSS                           <-----------TBP       --------->ANAC58<---------ALFIN1 >ANAC58        --------->DAG2                <----------DOF2        <---------YAB1      <---------REM1(2) >ANAC58       ---------->DOF2   ---------->DOF2    --------->AHL20(2)    --------->ANAC58--------->REM1(1)   tatcagagagataaaaaaaaagtgaatgagaatgagaaagagaagagcctttgtttatatacctttttgttctgatacacaatcaggtgtctacacccta  8512800                                           <----------DOF2                                        ---------->ID1                                    <----------DOF2                                    <---------DAG2              <-----------GT1   <-----------GT1   <----------DOF2           <---------ICU4  --------->TOE2(3)   ---------->ID1        ---------->DOF2<---------YAB1   ------>MYB83       <----------DOF2   <-----------GT1     --------->TOE1(3)     --------->YAB1   ------>MYB46(1)  <------------------------ANAC81         --------->TOE2(3)     ----------->GT1  -- >ANAC46  --------->AHL20(2)<----------DOF2<---------DAG2<-----------GT1    <-----------GT1        <-   aaacctagccaaatatttactcttcttttcctttattcctttttcctttttccttttagttaccttagtacaaaagtttaactattgtaattagacacta  8512900                                                                                            ---------                                                                                           ----------                                                                                        --------->LBD16                                                                                       --------->ANAC58                                                                                       --------->ANAC46                                                                                       --------->ANAC58                                                                                       --------->ANAC55(1)                          --------->ANAC58                                             <---------ANAC55(2)             ---------->DOF2                                                          <---------LBD16         <---------------------WRI1                                                --------->YAB1         ------->TEIL     --------->ANAC58                                     --------->AHL20(2)     <---------------AtSPL8  ----------->RAV1(1)                               <---------AHL20(2)   <  <---------YAB1      --------->ANAC58                                        <---------ATHB12------- ------->AHL20(2)     --------->ANAC58       ----------->GT1           XXXXXXXXXXXXXXXXXXXX>MIR841B*- --------AHL20(2)   ---------->DOF2<---------ICU4   ----------->GT1  ------->TEIL <---------ATHB12 --   atttataaatgtaccaaaagtccaaagcaaacaacaaaaattgcaaatagaaaattgaaaataatcttatgcattttctaataaatcatacggaaaagga  8513000       <---------AHL20(2)                                --------->ZAT18       <---------AHL20(1)                                --------->ZAT14    <---------ICU4                                       <---------ZAT14    --------->ATHB51                                   <-------MYC3    <--------HAHB4                                     ------->MYC3    --------->YAB1                                     <-------MYC2    -------->HAHB4                                     <-------PIF5                     -------------    <--------ATHB1                     <---------ARR14(2)<---------ABI4(2)    ------>ZmHOX2a(1)   --------->AHL20(2)                  ------->TEIL    ------->MYC4         ------>ZmHOX2a(2)   <---------YAB1              --------->ANAC46        ------->PIF5        <------ZmHOX2a(2)   --------->ICU4              --------->ANAC58       <---------ANAC58    <---------ARR14(3)   <---------ATHB51            --------->ANAC58       <---------ANAC58    --------->ARR11(3) --------->YAB1               <---------LBD16   <---------LBD16           --------->ARR14(2) >DAG2 --------->AHL20(1)   <---------WRKY12   <---------ANAC46           <---------ARR11(3) >DOF2 --------->AHL20(2)   <---------WRKY38(1)<---------ANAC58           <---------ARR14(2) ---------AHL20(2)          --------->ZAT14    <---------ANAC58<---------MYB52(1)       <------------ ---->GT1      <---------WOX13(1)      --------->ARR14(2)<-------TEIL     --------->ARR14(3) -------->AHL20(2)          <---------ZAT14 <---------MYB52(1)<-----------HVH21         <----------DOF2 ------->AHL20(2)  ---------->DOF2    <---------CCA1(2)------->MYC2      <------ZmHOX2a(1)        ---   aattaataattaattagattgaaaagtcagtccacggtatgtatctgtttcgtggaacgtgcaccgttacacagaggatcctgcattttccttttacaag  8513100                                       <---------ATHB12                                     --------->WOX13(1)                                   ------------>CBF                                  <-----------HVH21                                 --------->ANAC58        ----------->GT1          --------->TGA1a                                 -------->P       <--       <---------TOE2(3)         --------->bZIP60(2)                     --------->LBD16      <------      <---------At5g28300        --------->ANAC46                      <---------HSFB2a(2)   <-------     <-----------GT1             =======================================bZIP_DOF ------>MYB46(1) ----     --------->MYB52(1)          <---------O2                          --------->HSFB2a(2)--------->AHL20(2) <---------AHL20(2)              --------->O2                          <---------LBD16  <---------AHL20(2) -->AGL15                        --------->ANAC55(1)         ---------->DOF2     ------>MYB83-------- ---AGL15   --------->AHL20(2)   --------->ANAC58 ----------->GT1     <---------ANAC46  --------->AHL20(2) -------->GT1             <---------ICU4--------->YAB1     ----------->TBP<------NtERF2 <-----------TBP   tagtaaattacggtttaaatcggtttagtcattacacgtcaatcaaaacatactgtataatataaaagggtttcgcggagtccaacctatttttatatat  8513200                                                                            ------>NtERF2                                                                            --------->LBD16                                                                           --------->LBD16                                                                          <---------LBD16                                                              --------->LBD16                                                             <---------HSFB2a(2)          --------->KAN4(2)                                  --------->HSFB2a(2) -------AHL20(2)                                            <---------LBD16--------->ANAC46 ---AHL20(2)                                      <-----------GT1    <-----------HVH21            <-- --AHL20(1)                                     <---------ANAC58    <------MYB83                 <--- ----->AHL20(2)                                 <---------ANAC58    <------MYB46(1)              ---- ->AHL20(1) *TSS        <<<<<<<<<TBF1         <---------ARR11(3)   --------->MYB59              <----   ttaatagttgtatattcttcatcttcttcttcgtcttctctgaatcaatttcttacgcttcttctgggataggtcccccgcgaaaaattccattcttcag  8513300         <---------ANAC58         <---------ANAC46         <---------RAP2.6(2)         <---------ANAC58     --------->CCA1(2)     <---------GLK1(1)    --------->ARR11(1)    <---------GLK1(2)    --------->ARR14(2)                                                                    <---------TOE1(2) ----ZmHOX2a(2)                                                        <---------MYB59    <---------TOE2(2) ------ARR11(3)                                                <----------DOF2  <------ZmHOX2a(2) ----->ARR11(3)          --------->MYB46(3)             <---------YAB1----------->RAV1(2)--------->LBD16 -----At4g35610  ------>ZmHOX2a(2)                   <---------YAB1 <-----------GT1     <---------TOE1(1)   atcatagatttgcgtctgatctatataacaaacaaaaaaaaaaaaaaactaatctattattctagcttttatacctgattcgatcaatttccgaggtttt  8513400                                                                                              -------                                                                XXXXXXXXXXXXXXXXXXXX>MIR869.1------>ZmHOX2a(1)                                                               --------->AHL20(2)            <-------                                      ----------->GT1          <---------AHL20(1)    <----------DOF2          <---------ANAC58       ---------->DOF2               --------->AHL20(1)  ---------->ID1          <---------ANAC55(1) <----------DOF2                  <---------AHL20(2) <-----------GT1          <---------ANAC46  <-------TEIL                 ----------->GT1   --------->LBD16<----------          <---------ANAC58 --------->ALFIN1              --------->YAB1  <---------LBD16 <-----------GT1   ttttgctaaatttcgtgtacatgaagaaggtgcttcaaagaggttttaagcctgcaaaatggtaataaattcaattctggggtttttcttttttcctatc  8513500                                                                              <-----------GT1                                                                            --------->YAB1                                                                           <---------YAB1                                 --------->GLK1(2)                       <---------ICU4       <---------ANAC46         <---------ARR14(2)                       --------->ATHB51     <------       <---------ANAC58         <---------GLK1(2)   <----------DOF2      <--------HAHB4       <------MYB83   ------->TEIL         <---------ARR11(3)         <---------DAG2        --------->YAB1       <------MYB46(1) -->ARR14(2)            --------->ARR11(3)       ------->TEIL            -------->ATHB1      <------- --CCA1(2)      --------->MYB59 --------->ARR14(2)--------->HSFB2a(1)   --------->ICU4      <-------- -GT1  <---------ANAC58<---------GLK1(2)     --------------->AtSPL8     <---------YAB1    <---------MYB46(3)   ttctgtatgtcttgaagttatgtcaaaatctccagattctatttatgttcgaacctttttttttgggtaagagaattattatactgtttcatccgttggt  8513600                                                                        --------->ARR11(3)                                                                        <---------GLK1(2)                                                                        --------->ARR14(2)                                                                        <---------ARR14(2)         <XXXXXXXXXXXXXXXXXXXXXMIR864-3P                              ----------->ARR10        <---------TOE2(3)                                        ----------->RAV1(2)        <---------TOE1(3)                                      --------->ANAC46    <---------ANAC58              --------->At4g35610          --------->ANAC58    <---------ANAC46       <---------AHL20(2)                  --------->ANAC58    <---------ANAC58   <---------AHL20(2)                 <---------ARR14(2)                   <----- ---MYB46(3)           --------->AHL20(2)                 --------->ARR14(2)                  ------- --AtMYB61        <---------AHL20(2)        <----------DOF2  <-----------GT1                 <------- -MYB52(1)   <---------AHL20(2)   <---------At4g35610  <---------ANAC46 <---------ARR11(3)<------ZmHOX2a(1)   ttagtttcttgaggttttattgaatttatataatgcagcaaaacagctttgcaaatggcgaattcacgcctgaagatactcaagaacaagaaggagattc  8513700  Previous    Next  AGI:  At2g19700.1    Description:  unknown protein Range:  from: 8512049    to: 8512721    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g19710.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G29440.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65395.1); contains InterPro domain Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061) Range:  from: 8513212    to: 8517163    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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