Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         <----------DOF2                                                                             --  <------ZmHOX2a(1)                                                                              ---- --------->At4g35610                    <---------ATHB12       <----------DOF2             --------->ANAC58 ----------RAV1(2)                    --------->WOX13(1)  --------->ANAC58                 --------->ANAC58 ---->DAG2                  --------->AtLEC2              --------->ANAC58               ---------->DOF2 ---->DOF2          <---------YAB1 ------------------------>ANAC81          <---------TOE2(3) -------   agcaggagactttacttacttcatgaatacctgcaaaaatcaatcaattggaaacagagtaagcactttgcagagaataagataacatgaagaaagcaac  8508000        ---------->DOF2                                                                 -------------      <---------YAB1                                                      <---------At4g35610   <---------AHL20(2)                                         <------NtERF2  --------->At4g35610 ------->AHL20(2)                                            ------>NtERF2--------->At4g35610 ----->TOE2(3)                                           <---------DEAR3(1) --------->ANAC46      <-- ---->RAV1(1)     ----------->GT1          --------->GLK1(2)<---------DEAR3(1) ----------->RAV1(1)---   attatataatgaaagttcaagggtttataccgaaatgagagtaagaatcgaagtagtaatcggcgctggtaatgtcatcagcaacatcggcattgttgtc  8508100                                  ----------->GT1                            --------->HSFB2a(2)                                   <---------SPL7                            <---------HSFB2a(2)                                   --------->LBD16   - -------->WRI1  <-------TEIL------>ZmHOX2a(1)             <---------At4g35610   --------------->AtSPL8 -------At4g35610       --------->ARR14(2)             <-------TEIL <---------MYB46(3)             <- ------>At4g35610     --------->At4g35610      <---------At4g35610 <---------MYB52(1)             <--   atctccatcgtgcattgattcatcagcatcctcgaagtgtaacttcgtcgtctgagtttcatcagagccgttgttgttgttctccgtactagtcattttt  8508200                                                                            <---------DAG2                                                                            <----------DOF2                                        --------->ANAC58       *TSS       ------->TEIL                                        --------->ANAC58       <------ZmHOX2a(1)     <---------ANAC46                               --------->ARR14(2)            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                               --------->ARR11(1)     <---------TOE2(3)--------->ANAC58   ---------->DOF2             <---------ARR14(2) --------->CCA1(2)  --------->CCA1(2) <------NtERF2                 <---------GLK1(2) <---------ARR11(3) <---------ARR14(2) -------->LBD16           --------->MYB52(1)     --------->ARR11(3) --------->ARR14(2) --------RAP2.6(2) <---------AtLEC2   ---------->DOF2 <---------TOE1(3)--------->ANAC58    <---------YAB1 -------LBD16 <---------ARR14(2) <-------TEIL---------->DOF2 <---------TOE2(3)       <---------ANAC55(1)   tgcggcaaagagagaggttttggatggctaacagattcgaataagcaaaaagatttagggttttaggatggatacgaactttatgttatgtgtatgattc  8508300                <------------CBF             ------------>CBF          <---------MYB46(3)          <---------DEAR3(2)         <---------DEAR3(1)        --------->ATERF1(1)        <------NtERF2       <---------ATERF1(1)       ------>NtERF2                                                  ---------->ID1      <---------ATERF1(2)                                         <------------CBF      --------->ATERF1(2)                                       <---------MYB52(1)      --------->RAP2.3(2)                                     <------MYB83      ------->GAMYB                                    ------>ZmHOX2a(2)      --------->RAP2.3(3)                            --------->ARR14(2)      --------->DEAR3(1)                             <---------ARR14(2)  --------->ICU4 --------->REM1(2)     --------->ATERF1(1)                  ----------->GT1     <------MYB46(1)           --------->ZAT14     --------->DEAR3(2)                   <------MYB83<------ZmHOX2a(2)----------->GT1  <---------ZAT14     --------->RAP2.3(1)                  <------MYB46(1)    --------->MYB59<---------YAB1     --------->MYB46(3)                <---------MYB52(1)  <---------MYB52(1)          --------->ALFIN1     --------->ERF1              <-----------GT1<-----------GT1<-------GAMYB--------->ICU4    --------->At4g35610  >>>>>>>>>WRKY18 <---------AtMYB61 --------->ARR14(2)    --------->ANAC46 >>>    <---------At4g35610 ----------->HVH21--------->MYB59   <---------ARR14(2)--------->YAB1       >>>   tatttcagccgccggttcaattgtttttgacagataaaccggtttggtttataccgatccggttcggttattgtcgtaattataaggcagtgtagatgaa  8508400               ----------->HVH21        <---------ZAT2         <---------ANAC58           --------->ARR11(3)      <---------MYB46(3)          <---------ANAC58         ----------->ARR10        --------->ALFIN1         <---------ANAC58       *TSS<---------GLK1(2)<---------MYB46(3)        --------->ALFIN1                         <-----       ---------->DOF2     <---------ZAT6  --------->ANAC58<---------ANAC46                    <-----     <------ZmHOX2a(1) <---------MYB52(1)  --------->ANAC58<---------ANAC58              <---------AHL20(2) >>>>>>CBP60g  ----------->TGA1<---------MYB46(3)  --------->DAG2             <-------TEIL     <----- >>>>>>SARD1--------->GLK1(2) <---------ANAC46   ---------->DOF2      <------ZmHOX2a(2)<----------DOF2   atttggaggaaaagattctgacgctggtagtggtgagtggtgagcacggccaaaaggtatggcttgcttacgatcaccgattcattcttcttttatttcg  8508500          <---------RVE1(1)       <---------YAB1                                                                             ---    --------->GLK1(2)                                                                            <---   <---------GLK1(2)                                                                            -----   --------->ARR11(3)                                                                           ----- <---------TOE2(3)                                                                              <---- <---------TOE1(3)                                                                              <---- <---------YAB1                                                         ---------->ID1          <---- ----ANAC58                           <----------DOF2            <---------TOE2(3)              ----- ----ANAC58                         <----------DOF2              <---------TOE1(3)              <---- ----ANAC46                  <<<<<<<<<TBF1                 ----------->GT1                     <-----   tttaagattctgatattttggtctaaaattcttcttcgctcttttggattttggtttttaggggtttaaagtttgtttttttatgtgtttgagtctcaga  8508600       <---------GLK1(1) --->ZmHOX2a(2) ---ZmHOX2a(2) ---->ARR14(2) ---->ARR11(3)                                                            <---------TOE1(2) -----ARR11(3)                                            --------->TOE2(3) -----ARR14(2)                                            --------------->AGL15 -------ARR10                                  <---------ANAC58     --------->ARR14(2) ---->AGP1                        <---------TOE2(3)    <-----------GT1<-------TEIL<---------MYB52(1) -----AGP1    --------->ZAT14     <---------TOE1(3)  <---------ICU4 <---------ARR14(2) ----CCA1(2)  <---------ZAT14<----------DOF2   <---------ANAC58     <---------GLK1(2)             <--   tctaatttgaaatctcttcactgcgataatgctttttaggttttgaattgcttaatttttccataattcggattcgttcgatttgttagtctggaattga  8508700                                                                                        ------>ZmHOX2a(1)                                                                                       --------------                                                                      <-----------GT1  <-------------                                                            <---------ANAC58          ---------------                                              <----------DOF2   --------->HSFB2a(2)   <---------ANAC58                                  ---------->DOF2       <---------ANAC58              <---------ANAC46   <---------TOE2(3)<---------ANAC58       <---------YAB1   <---------ANAC58          <---------ANAC58 ----ZmHOX2a(1)     <---------ANAC58   <---------DAG2   <---------ANAC58      <-----------GT1    ----   ggactagggttttagtgatttagcttgatatgtgtgaaaagccttatgcttttggatgccttgcttctgaaattacattttttcagtttcctgttttagt  8508800                       --------->YAB1                       <---------ANAC58                  <---------ANAC46                          <-----------------AGL1                  ----------->GT1                           <---------ANAC58 ->AGL15  <---------ANAC58                               <----------DOF2 --AGL15  <---------ANAC58                            --------->GLK1(2) -->AGL3  <---------ANAC46  ------->TEIL          <---------At4g35610 ----->ATHB12  <---------AtMYB61                  --------->At4g35610                      ----------   tattgaattctatcgtggaggtgtataatgaaccatgctattgtatatgatgagctaatctttcttgtttaggcttagtttctgagactcaattggtaaa  8508900  Previous    Next  AGI:  At2g19670.1    Description:  protein arginine N-methyltransferase, putative. Identical to Probable protein arginine N-methyltransferase 1.2 (PRMT1.2) [Arabidopsis Thaliana] (GB:O82210); similar to ATPRMT11/PRMT11 (ARABIDOPSIS ARGININE METHYLTRANSFERASE 11), protein-arginine N-methyltransferase [Arabidopsis thaliana] (TAIR:AT4G29510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65390.1); similar to Os09g0359800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062975.1); contains InterPro domain Methyltransferase type 12 (InterPro:IPR013217) Range:  from: 8506168    to: 8508263    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g19680.1    Description:  mitochondrial ATP synthase g subunit family protein. similar to mitochondrial ATP synthase g subunit family protein [Arabidopsis thaliana] (TAIR:AT4G29480.1); similar to unknown [Solanum tuberosum] (GB:ABA40451.1); contains InterPro domain ATPase, F0 complex, subunit G, mitochondrial; (InterPro:IPR006808) Range:  from: 8508407    to: 8509913    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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