Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               ------->GAMYB          ------>ZmHOX2a(2)                                                 --------->ANAC58         --------->CCA1(2)                                                  --------->ANAC58         <------ZmHOX2a(2)                                                --------->MYB52(1)        <---------AGP1                                                 <---------ANAC55(2)        <-----------ARR10                                              --------->ANAC55(2)        <---------ARR14(2)                                             --------->ANAC58        --------->ARR14(2)                                             --------->ANAC55(1)        <---------ARR11(3)                                             --------->ANAC46        --------->AGP1                                                 --------->ANAC58            --        --------->ARR11(3)              <---------DEAR3(1)          <---------ARR14(2)             --    ---------->DOF2                     <---------RAP2.6(2)    <---------ANAC46                    <- -------->ANAC58                       <---------ORA47(1)      <---------ANAC58                    -- -------->ANAC58                       --------->RAP2.6(3)     <---------ANAC58                    -- -------ANAC58              --------->At5g28300   --------->ALFIN1  --------->ARR14(2)            --- -------ANAC58             ----------->GT1      --------->ALFIN1  ----------->ARR10              <---   gcgagccaaagatctagtcaagaacaactcggtgaaatatggacggctaagtgtggaggcccattgcttcgatacgcaacgacatctcgctatagaattc  8498100               <---------ARR11(3)               --------->ARR11(3)           <---------AtLEC2              --------->RVE1(1)          ------>ZmHOX2a(2)            --------->YAB1               ================================HOX2a_HOX2a            <---------GLK1(2)           <------ZmHOX2a(2)      --------->TOE1(3)                 --------->GLK1(1)      --------->TOE2(3)                 =================================HOX2a_HOX2a  --------->MYB46(3)                    <---------At4g35610                                       XXX ------->DREB2C(2)                      --------->At4g35610                                       --- ------->DEAR3(1)                      --------->ARR11(3)                                        ---- --------ETT(1)<---------ARR14(2)      <---------ARR11(3)                                        <--- ------->At1g77200                     --------->ARR14(2)                                    <------NtERF2 ------->DEAR4(1)             <------ZmHOX2a(2)                          --------->ZAT18     <------- ------>DEAR3(2)             --------->ARR11(3)                     ---------->DOF2         --------- ------At5g28300       --------->YAB1  <---------ARR14(2)         ------>ZmHOX2a(1)   <---------AtLEC2   accgacaacctcaagaatatctcgataatgagatcaattgggatctgcaaggagtttttagttccatcctctaagcgcagagacgttttcatggccgaaa  8498200                                                                    <----------ID1                                                                    --------->ANAC58   ------------>CBF XXXXXXXXXXXXXXXXX>MIR1887              --------->MYB46(3)        ---------->DOF2     --------->YAB1 ------>AHL20(2)                  >>>>>>>>>TBF1               ----------->GT1      --------->WOX13(1) ----->AHL20(2)             <---------HSFB2a(2)        ---------->DOF2       ---------->DOF2--------- ------AHL20(2)             --------->HSFB2a(2) --------->At5g28300 --------->ANAC58  <<<<<<<<<<<<<<< --RAP2.6(3)               --------->REM1(2)   ----------->GT1--------->ANAC58 ----------->GT1 >RAP2.6(2)             <---------ANAC46------------>CBF      --------->ANAC58--------->DAG2---------   taaataaaccctaagagagagagactccttgtagaagaagaaaccaatgcggtaaaacaaaggcaagtaaaagccaaaaaaaagttaatcacaatggtaa  8498300                                                                    --------->MYB52(1)                                                                    ------>MYB83                                                                   --------->MYB55(1)                                                                  <---------MYB46(2)                                                               <-----------GT1                                                             <---------MYB52(2)                                                            ------>MYB46(1)                                                            ------>MYB83                                                          ------->GAMYB                                                         --------->MYB46(3)                                                        --------->ANAC58      <---------TOE2(3)                                                        -------->P<---------MYB59 -->GT1               ---------->DOF2                   --------->ANAC58     ---------->DOF2 <<LFY                --------->ARR14(2)                ------>MYB83------>MYB46(1)                -- >YAB1       ---------->DOF2            <---------ZAT2  ------>MYB46(1) ----------->GT1--------->ANAC55(2)   aaacatggactgagagaaagcccgtatagcccaaagtttccaagcttgtataaggcccaaccaaataacctaacgagtttaaagttcaaacgtgatgaaa  8498400                                                                                                 <---                                                                                                <----                                                                                             <-------                                                                                             --------                                                                                            <--------                                                                                           <---------ERF1                                                                                           <---------RRTF1(1)                                                                                           ------>NtERF2                                                                                          <---------RAP2.3(3)                                                                                          <---------RAP2.3(2)                                                                                          <---------RAP2.6(2)                                                                                          <---------DREB2C(2)                                                                                 --------->YAB1<-----                                                                                <---------YAB1-------                                                                        ------>NtERF2     <---------DEAR3(1)                                                                      *TSS    --------->YAB1---------                                                                     <---------ATERF1(1)  <---------RRTF1(3)           <---------ANAC58                                          ------>NtERF2 <---------YAB1----           <---------ANAC58                                         ----------->HVH21   --------->MYB52(1)        <-----------GT1                                    --------->TOE2(3)  <---------ICU4<------NtERF2      <----------DOF2            ----------->TBP           --------->TOE1(3) --------->ICU4<---------RAP2.3(1) <---------DOF5.7(2)             <---------AHL20(2)<---------HSFB2a(2)--------->RAP2.6(3) <---------RRTF1(2) <---------At5g28300             --------->AHL20(2)--------->HSFB2a(2)--------->ATERF1(1)--------->RAP2.6(3) ------->DOF5.7(2) <---------TOE1(2)             <---------ANAC46   --------->DEAR3(1) ----------->HVH21   cgttaccgttttagcgtttctcatgtttcttccatataaatagttttagttttgtagaaaaccctaatcgacgacggccattatgataaatgacggcgga  8498500                                                             <---------ALFIN1                                                            <------NtERF2                                                           <---------ORA47(2)                                                           <<<<<<<<<AtERF-4                                                           <---------RAP2.3(1)                                                           <<<<<<<<<AtERF-3                                                           <---------ERF1                                                           ------>NtERF2                                                          <---------ATERF1(2)                                                          <---------RAP2.6(2)                                                          <---------RAP2.3(2)                                                          <---------RAP2.3(3)                                                          --------->ATERF1(2)                                                          <---------DEAR3(1)                                                          <---------bZIP60(1)                                                          --------->bZIP60(1)                                                         --------->ATERF1(1)                                                         <------NtERF2                                                         --------->RAP2.6(3)                                                        <---------ATERF1(1)                                                        <---------ERF1                                                       <---------DEAR3(1)       <---------ARR14(2)                            <------MYB83     --------->LBD16                                 <---------ANAC58   <---------LBD16                                   <---------ANAC58 ------At4g35610                                     <------MYB46(1) -------ARR10                                       --------->MYB55(2) --DEAR3(1)                  <---------GLK1(1)      <---------AtMYB61 ->ALFIN1                    --------->GLK1(1)      --------->MYB111(1) -LBD16--------->ARR14(2)<---------HSFB2a(2)        <---------MYB46(3) -NtERF2       <---------ANAC46                     --------->MYB111(2)            --------->ANAC58 -->LBD16     <---------At4g35610                   --------->MYB46(2)  <---------ANAC58   ------>ZmHOX2a(1) >ATERF1(1)   --------->At4g35610              <------ZmHOX2a(1)        <---------ANAC58  --------->TOE2(3) ----->At4g35610     <-------GAMYB         <------ZmHOX2a(1)--------->ATERF1(1)    --------->ANAC58   gctaaaccggagacgctgcttagggttgcagaaatcggtggaagaggaaggagtttggtggcggcacagtctcttcgtgctggacaagttatcctcagag  8498600                                                                                      <---------At4g35610                                                                                --------->At4g35610                                                                                <---------At4g35610                                                                             <---------MYB52(1)                      <------------------------ANAC81                      <---------MYB46(3)                      <---------DAG2                                       --------->MYB52(2)               --------->ZAT14                      ------>ZmHOX2a(1)    <---------MYB52(1)   -------               <---------ZAT14                  <-----------GT1        <---------ANAC58    ------>NtERF2         ------>ZmHOX2a(1)               ------>ZmHOX2a(1)             <---------ANAC58<---------DEAR3(1)    ------>ZmHOX2a(1) <----------DOF2 ------>ZmHOX2a(1)             <-----------GT1<-------TEIL   agtctcctctccttctctactctgcttttccatttctctcctcctctgtttctccttactgcgaccattgtttccgtttgttagcttcatcggcgcatca  8498700                                                                                   <---------ATERF1(1)                                                                                   ------>NtERF2                                                                                  --------->ATERF1(2)                                                                                  <---------ATERF1(2)                                                                                  --------->DEAR3(1)                                                                                  <---------DEAR3(1)                                                                                 <---------LBD16                                                                                 --------->ATERF1(1)                                                                          <-----------ARR10         =                                                                        --------->GLK1(2)           -                                                                        --------->ARR14(2)     ------                                          <---------ANAC58              <---------ARR11(1)    <------                  --------->TGA1a      <---------WOX13(1)               <---------ARR14(2)   ------>MYB83                  --------->O2       <---------ICU4                     ------->TEIL<------NtERF2   =       <---------ATHB12             --------->ICU4                      <-----------ARR10    ------>MYB46(1)     --------->WOX13(1)  <----------DOF2  <---------ANAC58             <---------ARR14(1)   --------- -->At4g35610     ==================bZIP_DOF        --------->YAB1     <---------CCA1(2)--------->REM1(1)   gaaatgtcaatcttgctctctcgtctccttttgtagccctaattgcttcgcctctcatactccttggctctgcgaatctcttcgccggcttcaccaatca  8498800                                                                                                   --                               <-----------HVH21                                                   <-   ------>ZmHOX2a(1)          =============================HOX2a_HOX2a                             <-   ==================================HOX2a_HOX2a                                                   --   =====================HOX2a_HOX2a                                           <---------At4g35610  <-   --------->At4g35610        ================================HOX2a_HOX2a  ------>NtERF2         ---- ====================================HOX2a_HOX2a       ------>ZmHOX2a(1)   --------->At4g35610  <---- ----->ZmHOX2a(1)         <---------YAB1            ------>ZmHOX2a(1)      <---------At4g35610  ----- --->YAB1           ------->TEIL                <---------ARR14(2)        <---------DEAR3(1)--------- ---ATHB12          -------->P------>ZmHOX2a(2) --------->ARR14(2)        --------->DEAR3(1)<-------- =======================HOX2a_HOX2a       <---------ZAT2    --------->At4g35610          <---------YAB1 >WOX13(1)       <------ZmHOX2a(2)        --------->ZAT2    <---------At4g35610       ------>ZmHOX2a(1)   tcctcctctgcattctccgatcaaccttctgatcgtcaagtccaagctcgtttcctcctctctgcttacaatctcgccgctgcttctccttctgatttcc  8498900                                           ------>ZmHOX2a(1)                                         --------->HSFC1(2)                                       <---------ARR11(3)                                       <---------ARR14(3)                                       --------->ARR11(3)   <-----------GT1                     --------->ARR14(2) ------->ARR11(3)                      <---------ARR14(2)              --------->At4g35610 --------ARR11(3)            --------->RAP2.6(2)                    <---------At4g35610 --------GLK1(2)           --------->At4g35610       <---------LBD16<---------ZAT2 ------->ARR14(2)          <---------ZAT2<---------HSFC1(2)         --------->ZAT2 --------ARR14(2)          --------->ZAT2------>ZmHOX2a(2)          --------->At4g35610             < ----->LBD16               <---------At4g35610      <-----------RAV1(1)--------->ZAT2               < -----HSFB2a(2)            <------NtERF2<------ZmHOX2a(2)        <---------At4g35610                < ---->HSFB2a(2)       <---------ZAT6  --------->GLK1(1)<---------MYB46(3)                           < >GLK1(1)          --------->ALFIN1   <---------GLK1(1)--------->LBD16 <---------ZAT2        <------- -GLK1(1)       <---------TOE2(3)    ----------->ARR10<---------ANAC46 <---------At4g35610<----------DOF2   agattttgctctctctccaaggtagtggcagcagcaatggagatccttcttgttctgcgggtgattctgcagctgctgggtttcttcattctcttttatc  8499000  Previous    Next  AGI:  At2g19630.1    Description:  F-box family protein. Identical to Putative F-box protein At2g19630 [Arabidopsis Thaliana] (GB:Q9ZUN0); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT1G31080.1); contains InterPro domain F-box associated type 3 (InterPro:IPR013187); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 8497299    to: 8498192    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g19640.1    Description:  ASHR2 (ASH1-RELATED PROTEIN 2). Identical to Histone-lysine N-methyltransferase ASHR2 (ASHR2) [Arabidopsis Thaliana] (GB:Q9ZUM9;GB:Q84WB9;GB:Q94CD2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G06620.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82112.1); contains InterPro domain SET; (InterPro:IPR001214) Range:  from: 8498470    to: 8500002    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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