Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    -                       <---------CCA1(2)                                                     --------                      --------->ARR14(2)           --------->ANAC58                       --------->ANAC46                      ---------->TaMYB80           --------->ANAC46                       --------->ANAC58                   <---------ANAC46      <---------GLK1(2)                                --------->ANAC58                   ----------->GT1     <---------TOE1(2)                                  --------->ANAC55(2)               ---------->DOF2      ------>ZmHOX2a(2)          <---------ZAT6             --------->ANAC55(1)             --------->ZAT18    <---------YAB1     --------->ANAC58                       <---------ANAC55(2)             <---------ZAT14  --------->YAB1    <---------REM1(2)                        XXXXXXXXXXXX  --------->WOX13(1)  <---------ARR14(2)--------->HSFB2a(1)    --------->ALFIN1 --------->ANAC46  ---   gtatcactcagagagtgcaaagcgtatatcactgatgatccaaggttctcttcacgactcttgaagtgttgatggtatgttcacagcataacacgcaaca  8490600                                          <---------ZAT2                                          --------->At4g35610                                 --------->ICU4                            --------->ANAC58          <------MYB46(1)   --------->ANAC58          <------MYB83<------MYB83--------->ATHB12   ----------->RAV1(1)--------->ANAC58    <---------HSFB2a(1)             --------->At4g35610   -----  <-----------------AGL2 ---------->DOF2  --------->HSFB2a(1)        --------->CCA1(2)      --------- -------->ANAC58      --------->ANAC58    --------->HSFC1(2)         --------->GLK1(1)      <-------- -------->ANAC58      <------MYB46(1)     <---------HSFC1(2)         <---------GLK1(1)     <------ZmHOX2a(1) --->RAV1(1)         --------->MYB59      --------->ZAT2            --------->ARR11(3) --------->LBD16 XXXXXXXX>MIR2939    --------->MYB46(2)   <---------At4g35610       <---------ARR11(3)<-----------RAV1(2) ------->DOF2       <--------P   <---------ATHB12             <----------DOF2       ----------->RAV1(1)   tgaagccacatttggtctcaaggtaggcaaaggcaatgaatgggagcttccgaatgtatagatgctttgagatatcagaagagaacccccagaggaacct  8490700                                                                                         <------ZmHOX2a(1)                                                                                        <------MYB46(1)                     <---------YAB1                                                     <------MYB83                    --------->ARR11(3)                                                 --------->MYB111(2)     --------->RVE1(1)                                               <---------------AGL15    <---------ARR11(3)                                               --------------->AGL15    --------->ARR11(3)<---------ICU4                                 <----------DOF2   --------->MYB59  <---------AHL20(2)<---------ARR11(3)                            --------->GLK1(2)   <--------P ------>GT1        --------->YAB1     <-----------GT1            <---------GLK1(2) --------->DAG2 >ARR14(2)     --------->ANAC46    ----------->GT1  --------->AHL20(2)           ---------->DOF2 -ARR14(2)  <---------REM1(2)    <---------ANAC46   <---------AHL20(2)      ----------->GT1   -------   gtataaaatctctctacacgaagataattacagagacttgtaacttcacttcaattttttgttttgggattcttttttgagtaaaaaggtaggaagaggt  8490800                                                                                 ----------->GT1                                                                               --------->MYB46(3)                                                                              -------->P                                                                              ------>MYB83                                                                              ------>MYB46(1)                                                                             --------->MYB55(1)                                                                             --------->MYB52(1)                                                                            <---------MYB46(2)                             --------->ZAT14                                --------->MYB46(3)                             <---------ZAT14                                <---------MYB111(2)                           ------->MYC3                               --------->ATHB12                           <-------MYC3                               <---------ICU4        ---------                <----------DOF2                    <---------ARR11(3)<---------ZAT6    --------->DAG2 ---->GT1    <-----------GT1 --------->ZAT18       --------->ARR11(3)--------->ICU4   ---------->DOF2   tatattttagtttgtttactttcttctcatgtgctctgaaacaaaataagaaacatctccaacgtattgtagtgattaccaaccgataaaaagctaaaga  8490900                                                                      <---------LBD16                                                                     <---------ANAC58                                                               <---------TOE2(3)                                                              <-----------GT1                                                           <----------DOF2                                                       --------->GLK1(1)                                                      --------->ARR11(3)                          <--                                                      <---------ARR11(3)                      <------                                                  ---------->DOF2    <---------ANAC58        <-------                                                --------->ANAC46     <---------ANAC46<---------YAB1 ->DOF2             ----------->GT1    <------------CBF<---------GLK1(1)        <------NtERF2<-------   atttttgagttagtcgattacaaagtataaacacaaatttgaattgatacaccaaagatttctttaacatttcgtgggaggccgagtattatttggcttt  8491000                                                                         --------->YAB1                                             --------->MYB52(1)    ------>NtERF2                                            ----------->HVH21     <---------DEAR3(1) -------At4g35610                         --------->ANAC55(2)  <---------ANAC46    <----------DOF2 ----DOF2              --------->CCA1(2)  <---------ANAC55(2) <---------LBD16     --------------->AGL15 --ANAC58             *TSS   --------->ARR11(3)           <------ZmHOX2a(1)    <-----------GT1   <--- --ANAC58       <---------LBD16          <-------TEIL    --------->ZAT18 --------->TOE2(3)   ------->TEIL   agcttcgaaccaagactctctggagatagaagctctggctaaatacatgacggactgagaggactacgggggctatcttaatttccttttatatgaattt  8491100                                                                            --------->ARR11(3)                                                                            --------->AHL20(1)                                                                    <---------AHL20(2)                                                               <---------AHL20(2)                                          <---------AHL20(2)   <---------AHL20(1)                     --------->ARR11(3)  <---------AHL20(2)    --------->AHL20(2)              <----------DOF2            --------->AHL20(2)    --------->AHL20(1)           <-----------GT1           <---------YAB1           --------->AHL20(2)          <-----------GT1 --------->ATHB12---------->DOF2     <---------AHL20(2)         <---------AHL20(2) --------->GLK1(1)             ------>ZmHOX2a(1) <---------AHL20(1)     --   --------->YAB1    <---------ARR11(3)  --------->YAB1  <---------MYB59   <---------AHL20(2)      --   --------->TOE2(3)<<<<<<<<<RAP2.2--------->YAB1      ---------->ID1    --------->AHL20(2)      ---- --------GT1  <---------DAG2<---------GLK1(1)      <---------MYB52(1)    <---------AHL20(2)    <-----   ttctatgttaatttaactttttagatattgatttccattgtaattaaaacgctgtttgtcctaattttattttatatatatattgtataggttccattaa  8491200      --------->YAB1                                  <-------MYC3     <------ZmHOX2a(2)                                ------->MYC3 --------->SPL7                                      --------->O2 ------->TOE2(2)           --------->ANAC58      <------ZmHOX2a(2)                <----------DOF2 ------->TOE1(2)           --------->ANAC58     <---------ARR11(3)       ------>ZmHOX2a(2) ----->ZAT6        --------->AtLEC2             --------->ARR11(3)      <---------At4g35610 ------GT1      <-------TEIL              <---------HSFB2a(2)          <---------ARR11(3)   ccctacgatcaaaacagtttcatacaaactcgcctcatcttgttctctaagatcaacgtgtctgatcaagcttgatctgcttctcttttttttttgtttt  8491300              --------->ATHB12            <---------WOX13(1)           <---------ANAC58           <---------ANAC46           <---------ANAC58         <----------DOF2     <---------YAB1         <-----------HVH21   <---------AHL20(2)     ------->MYC3                                     --------->ARR11(3)       <   <---------ICU4         <-------MYC3                                     <---------ARR14(2)       -   -------->HAHB4        --------->O2                                      <---------ARR11(3)<-------  <---------YAB1      <---------WRKY38(1)                                  --------->ARR14(2)--------  <---------ATHB51    <---------WRKY12               --------->ALFIN1     <---------CCA1(2) <--------  --------->ICU4     <------ZmHOX2a(2)         --------->ALFIN1       <-----------HVH21<---------AHL20(2)   tgtaattattcttgcttgattcgatcaacgtgtctgagctttgattcaagtgggggtttggaggtatgtgagcgtcaaatcttcaagttttaattctgga  8491400                                                                      --------->MYB46(3)                                                                      <---------ATHB12                                                                      <---------MYB55(2) <------MYB83                                                        -------->P <------MYB46(1)                                                     ------>MYB83 ---------TOE2(3)                                            <---------AHL20(2) -------->MYB59                                        --------->AHL20(2) --HSFB2a(2)   <------MYB46(1)                 <---------ANAC46      ------>MYB46(1) ->HSFB2a(2)   <------MYB83               <---------MYB46(3) --------->AHL20(2)       <-----------GT1 -LBD16--------------->AGL15           --------->ALFIN1<---------AHL20(2)    <<<<<<<ZML2     <-------   attaggtttctcttagtgggttttttttttgtatcatccgagtgttgttgtttgaatataaatataaatccaaccactagaacatgttttacttactttg  8491500  Previous    Next  AGI:  At2g19600.1    Description:  ATKEA4 (Arabidopsis thaliana K+ efflux antiporter 4); potassium:hydrogen antiporter. similar to KEA6 (K+ efflux antiporter 6), potassium:hydrogen antiporter [Arabidopsis thaliana] (TAIR:AT5G11800.1); similar to Os06g0561200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057872.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65376.1); contains InterPro domain Sodium/hydrogen exchanger; (InterPro:IPR006153) Range:  from: 8486280    to: 8490912    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g19610.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G07640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21795.1); contains InterPro domain Zinc finger, C6HC-type; (InterPro:IPR002867); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 8491022    to: 8493107    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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