Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                ----------->GT1                <---------WRKY18(1)                                      <---------ICU4               --------->WRKY38(1)                                      <---------ATHB12        ---------->DOF2     <---------ANAC46                          --------->WOX13(1)     --------->ANAC46    ----------->HVH21                        ----------->GT1    <----------DOF2 -->ARR14(2)   ----------->HVH21                        ------>ZmHOX2a(1)--------->YAB1 ---ARR14(2)   --------->WRKY12            <----------DOF2        <---------ZAT6     <---------DAG2 <   tgccttcactcaaagccttgaccatctctgactggtaaaacttctctttcaaatgctcctcatagtgagagttaatcatcttcttcactttctccatcaa  8484200                                                  --------->GLK1(1)                        --------->TOE1(3)         --------->CCA1(2)                        --------->TOE2(3)        --------->ARR14(2)                       ----------->RAV1(2)       --------->ARR11(3)                      -------->P                 <---------ARR14(2)                            ------                      ------->TEIL            <---------TOE2(3)                  <---------ANAC58              <---------ICU4                  <---------TOE1(3)                  <---------ANAC46              --------->YAB1              <----------DOF2       <---------ARR11(3)            <------             --------->ICU4             <---------------AGL15   --------->ARR11(3)            -------             <---------YAB1             --------------->AGL15  <---------CCA1(2) <---------ANAC58 ----------DOF2 <---------YAB1   <-----------GT1<------ZmHOX2a(1) --------->TOE2(3)       ---------->DOF2   ctctttatcaattccatgattatcaacctgaaaattcactaactctttaaggatatacagtagacatatcttagaaaacactgccttgtgcataaagatg  8484300                              <-------MYC3                              ------->MYC3                    <---------ALFIN1          ----------->HVH21 ----->GT1     --------->GLK1(2)<-------TEIL----------->GT1<---------ANAC58 ---ARR11(3)   --------->ARR14(2)<---------AtLEC2          <---------ANAC58--------->MYB46(3) -->ARR11(3)   <---------ARR14(2)--------->YAB1  <---------bZIP60(2)      --------->AtLEC2          <   ttatacataccatgaagaatccccacttatcacatgcatgatcaagaagtgacatggtcttgcttctcttctctccatccaactctgcaaaatcaataac  8484400                                                <---------DAG2                                                <----------DOF2                                             <-----------GT1                                             <---------AHL20(2)                  <---------HSFB2a(2)                                         <---------AHL20(2)        <---------MYB46(3)                                        <---------AHL20(2)      <---------ARR14(2)            <------        <---------CCA1(2)       <---------CCA1(2)               --------->ARR14(2)  ---------->DOF2 ---------GLK1(2) <----------DOF2   <----------DOF2             <---------GLK1(2)--------->HSFB2a(2)   tggaatctccatctctctctctttgatcaaaaccatctcttttttatttactttttctcacacacagatttgttgaatgcaatctagaaagagtatttat  8484500                                           <------NtERF2              <---------AHL20(2)        <------ZmHOX2a(1)      <------NtERF2                    <----             <---------AHL20(2) <---------ANAC46     <---------MYB59                      --------->ZAT14         --------->ICU4         <---------ANAC58    <---------ANAC58                  --------->ZAT6 ---AHL20(2) --------->AHL20(2) <---------ANAC58    <---------ANAC58                *TSS  <---------ZAT14   aggcataagtgaaaattaaatctctgtttctcttgtgtgttaggaggcatagttgcctacttggaggcaaaaacaatagtttctttcaacactattctgt  8484600                        <---------ANAC46                        <---------YAB1                        <---------ANAC58            --------->GLK1(2)                        <---------ANAC58            <---------ARR14(2)                        <---------ANAC55(2)         --------->ARR14(2)                        <---------ANAC55(1)        <---------GLK1(2)                   --------->ATHB12      <------------CBF                   <---------ICU4      --------->AHL20(2)                           <------------CBF   <------------CBF<--------HAHB4      <---------AHL20(2)                          <------ZmHOX2a(1)  --------->ATHB12<---------YAB1    --------->AHL20(2)    <----------DOF2   ------------>CBF--------- -----MYB52(1)  --------->YAB1<---------TOE2(3) --------->YAB1    ----------->GT1 <---------YAB1   taactcattgaatttgaagcatcattacgtttaatgaataaaaaattgtataagaatctgctttggaaatgtaaaatgaacaataggattgaagaaaagt  8484700                                                    --------->TOE2(3)                     <----------                                               --------->ATHB51                      <---------ANAC58   --------->ZAT14                             <---------ICU4                        <---------ANAC46 ->DOF2    --------->AtLEC2                 --------->YAB1        <-----------HVH21  <---------ANAC58   ccaagttcagtccatacaaccatgtgatcacaagtttttgaatttttcataatttcttaatggttttgggtcactcccattgtgtttccttgtaacatca  8484800                                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                      <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                     <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                   --------->YAB1                                    <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                  <---------RAP2.6(3)                                    <------------------------ANAC81                 ------>MYB83                         --------->ANAC58                                           ------>MYB46(1)                         --------->ANAC58                                       ------->TEIL                   <---------------AGL15                            --------->YAB1<---------MYB59                 <<<<<<<<<TBF1      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------ARR14(2) <---------ICU4 -GT1       <----------DOF2 ---------->DOF2           <-----------GT1  --------->ARR14(2)<---------ATHB12   tttatgtgaagtttctttcttcttcacaaggaaagttttttttttttttttttttttttcttatccctactcatattcgatggacctagccatcatgtct  8484900                                                                                   ----------->GT1                                                                              <---------ZAT18                                                                              <---------SPL7                                                                             <---------ANAC58                                                                             <---------ANAC46                                                                             <---------ANAC58                                                    <---------ZAT14         --------------->AtSPL8                 <----------DOF2                    --------->ZAT14         --------------->AtSPL3              <-----------GT1                     --------->ANAC46     --------->ATHB12         <---------YAB1      <---------AHL20(2)--------->ZAT14       <-----------TGA1  <---------ANAC46   <-----------GT1  <----------DOF2    -------->P  <-----------HVH21   aattgtgtattatgtttttcttttcactgattttttttttctttaaaacttcactaaactacccatctaagcgtcattggcgtacttgtaaaatgtgtta  8485000                   <---------GLK1(1)                   --------->CCA1(2)                   --------->GLK1(1)                  --------->ARR14(2)                  <---------ARR14(2)            --------->ARR14(2)            <---------ARR14(2)           ------>MYB46(1)           ------>MYB83  --------->ALFIN1                                       <----------DOF2         --------------->AGL15                                                  <---------DAG2         <---------------AGL15                                                 <---------------AGL15        <-----------------AGL1                                                 --------------->AGL15        <-----------------AG<---------ANAC46                                  <-----------------AGL3        ----------------->AGL2                                                <-----------------AG        <-----------------AGL3   <---------ANAC46                             ----------------->AGL2        ========================================================================================MADS_MADS        ----------------->AGL3 <---------ANAC46            --------->YAB1  <-----------GT1        =======================================================================================MADS_MADS    <-----------HVH21  <---------ANAC58                --------->ZAT6<---------YAB1   --------->bZIP60(1) <---------ANAC46       --------->GLK1(1)    --------->YAB1   <---------bZIP60(1) <---------ANAC58       --------->At4g35610 <---------ATHB12              -----   ttctggtgtcaccaaatttggatatgcgtggtgttgtgtttagcaaggagctctataacactcatcaaatgataatatgacccttttttggtatgaagaa  8485100  Previous    Next  AGI:  At2g19590.1    Description:  ACO1 (ACC OXIDASE 1); 1-aminocyclopropane-1-carboxylate oxidase. similar to 1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative [Arabidopsis thaliana] (TAIR:AT1G12010.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65375.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123) Range:  from: 8483048    to: 8484584    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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