Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       --------->ANAC58                                                     --------->ANAC58                                                    ------>NtERF2                                                   <---------ALFIN1                                                  --------->ATERF1(1)                                                  <------NtERF2                                                 <---------ATERF1(1)                                                 ------>NtERF2                                                --------->DEAR3(1) ------>NtERF2                <-------GAMYB                   <---------ETT(2)  --------->DEAR3(1)                --------->At5g28300             ----------->HVH21 --------->RAP2.3(2)               <               ----------->GT1                --------->LBD16    --------->RAP2.3(1)               --               <---------MYB46(3)             <---------ATERF1(1)--------->ORA47(2)                <-            ------------>AtMYB77             --------->TOE1(2)  --------->LBD16                    --            ------>NtERF2                    --------->TOE2(2)  ------>NtERF2                      --           --------->DEAR3(1)               --------->DEAR3(2)  <---------ATERF1(1)              <---         ------>ZmHOX2a(1)                 --------->MYB52(1)  --------->ANAC46               <------   <---------HSFB2a(1)                 --------->ANAC46        --------->DEAR3(1)          --------->MYB52(1)   --------->HSFB2a(1)                 --------->ANAC58       <---------LBD16       <---------ALFIN1- ->AtMYB61 ----------->HVH21           --------->ANAC58  <----------DOF2           --------->MYB46(3) -GT1   --------->TOE1(2)     --------->GLK1(2)--------->RAP2.3(1)--------->RAP2.3(3)   --------->ANAC46   cgacaacgttcctccgacggttatatgcaaataatccgtccaagaaaccggcgacacccctttctccgccgtcttcttaagcacatccacccataacgtc  8454000              <---------ZAT14          <---------WRKY12          <-----------bZIP910(2)         --------->TGA2(2)        <-----------HVH21        <-----------TGA1       --------->bZIP60(1)       <---------TGA1a       --------->O2       --------->ANAC58       --------->ANAC46       --------->TGA1a       <<<<<<<<<<AtbZIP1       --------->bZIP60(2)       <---------O2       --------->ANAC58       ==============================bZIP_DOF       <---------bZIP60(1)      ------>NtERF2     <---------ALFIN1    <------NtERF2   <---------RAP2.6(3)   <---------ATERF1(1)                                <-----------HVH21   <------NtERF2                                     --------->ANAC58   ------>NtERF2                                     --------->O2  --------->RAP2.3(2)                                <---------O2  --------->RAP2.3(3)                                --------->TGA1a  --------->RAP2.6(2)                                --------->bZIP60(2)  --------->ANAC58                                 <---------ALFIN1  --------->ANAC46                               --------->CCA1(2)  --------->DREB2C(2)                    <-----------TGA1  --------->ATERF1(2)                   --------->TGA1a  --------->ANAC58                      <---------O2 --------->ANAC58  --------->DEAR3(1)                    <---------bZIP60(1)  <---------ATERF1(2)                   <---------TGA1a--------->TGA2(2)  --------->RRTF1(2)                    --------->ANAC58                       ----------->HVH21  <---------ATERF1(1)                   --------->bZIP60(2)                   <------NtERF2 --------->RAP2.3(1)                    --------->ANAC46                     --------->LBD16 --------->SPL7                         --------->O2 --------->ANAC55(1)    --------->DEAR3(1) ---------ATERF1(1)                     --------->ANAC58        <---------YAB1--------->ATERF1(1) ---->NtERF2<---------At4g35610         =======================bZIP_bZIP   <---------LBD16 --------ATERF1(1)        =====================================bZIP_DOF   ------>NtERF2 ------->ANAC46           ========================bZIP_DOF     <---------TOE2(3)        <---------ANAC58 ------->LBD16<---------ZAT18         <---------ALFIN1<-----------TGA1    --------->LBD16           < ------LBD16<------NtERF2 <----------DOF2<-----------HVH21--------->ICU4 --------->ANAC46    -------- -----HVH21 --------->At4g35610    --------->AtMYB61 --------->ANAC46    --------->DEAR3(1)<---------WRKY18(1) ----->NtERF2 --------->ZAT14     --------->MYB46(3) --------->ANAC55(2)<---------LBD16 <---------ANAC58   ccggccgccacgtcagcgtacttcttgtcttttgaaaccaccacgtcagtgatacacgtcatgttgacgattactccgccggagaccgaggcttggccgt  8454100                                                      <---------ANAC58                                                      <---------ANAC46                                                     ------>NtERF2                                                    --------->LBD16                                                    <---------RAP2.3(1)                                                   <---------RAP2.6(2)                                                   <---------RRTF1(2)                     --------->ALFIN1                                       =======================================bZIP_DOF   <------ZmHOX2a(1)                                       <---------DAG2<------NtERF2                   <---------MYB46(3)                                     ------->TEIL  <---------RAP2.3(2)              --------->ALFIN1                           <---------ANAC46        <---------DEAR3(1)             <---------MYB46(3)                        <---------MYB52(1)         <---------RAP2.3(3)          <---------At4g35610                  ------->PIF5   --------------->AtSPL8  --------->ARR14(2)--------->CCA1(2)                  <-------PIF5   --------------->AtSPL3  <---------ARR14(2)<---------GLK1(1)      --------->ZAT18 --------->RAP2.3(2)      <---------MYB52(1)          --------->GLK1(1)      <---------ZAT18 --------->RAP2.6(2)    <---------ANAC58             --------->ARR11(3)     <---   --------->ALFIN1   >>>>>>>>>AtERF-4 <----------DOF2<---------ANAC58    <---------ARR11(3)     ----  <------ZmHOX2a(1)  --------->RAP2.3(1)     <---------ANAC58       <---------O2--------->At4g35610 ---------TOE2(3)=================================bZIP_DOF      <------ZmHOX2a(1)<---------DEAR3(1) --------->AGL1  --------->TGA1a <---------KAN4(2)<---------LBD16   <---------TGA1a <---------AtMYB61   ttaaggagtggccttggccacgagccgctacttggaatgtactttttccgtttgcggcgtattggaggagacgagagatatcagcggtggaggaggggca  8454200              ----------->HVH21             <-----------HVH21          <------NtERF2         --------->LBD16         ------>NtERF2        --------->DEAR3(1)        <---------ANAC46       <---------LBD16       <------NtERF2       --------->ATERF1(1)      --------->ABI4(1)      <---------ATERF1(1)      ------>NtERF2     <---------ATERF1(2)     --------->DEAR3(1)     --------->RAP2.3(3)     --------->RAP2.3(2)                                        <---------HSFB2a(1)     <---------DEAR3(1)                                         --------->HSFC1(2)    --------->ATERF1(1)                                 --------->ICU4    --------->ERF1                                 --------->LBD16--------->ARR14(2)    --------->RAP2.3(1)          --------->LBD16 <---------LBD16<---------HSFC1(2)    --------->ORA47(2)         <---------HSFB2a(2)<---------ANAC46<---------ARR14(2)                >    --------->RAP2.6(1)   <---------YAB1         --------->At4g35610                             ----   <---------RAP2.3(1)<-------GAMYB              <---------At4g35610------>ZmHOX2a(2)           <----  --------->ANAC46   --------->MYB55(2)          <------NtERF2  --------->HSFB2a(1)     <---------TOE2(3) ------At4g35610     <---------MYB46(3)        <---------DEAR3(1)<------ZmHOX2a(1)      <---------TOE1(3) ----->At4g35610    --------->ALFIN1    <---------YAB1<---------At4g35610       --------->ALFIN1-----   gattacgccgccgggggtcacggtggttatgtttccgaagtcatgagaggctgcggagatgatggaaggatcggtagagagggtgaggttaagggattta  8454300                                       ---------->DOF2         <---------AHL20(2)        <---------ICU4         --------->AHL20(2)        <--------HAHB4        --------->YAB1            <---------YAB1            --------->TOE2(3)   <---------ATHB12               --------->ICU4           <--------HAHB4 --------->WOX13(1)          <------MYB46(1)              --------->ICU4 >>>>>>>>GT-1           --------->ATHB12         <---------YAB1 ------->GT1           <---------YAB1<---------YAB1---------->DOF2   ----------->ARR10 -----TOE2(3)     <---------MYB52(1)--------->TOE2(3)     <---------YAB1 ---->MYB59  <-----------GT1 <------MYB83   ----------->GT1<---------ICU4              <---------YAB1   ggtaaatcaattttaataccgtttgatgatttggtgatcattaaaaccgtgattaaagtgatcattaaacgaagattagccatttgtttatgtttctctc  8454400                                              <---------GLK1(1)   <-----------TBP                                             --------->ARR11(3) <---------ANAC55(2)                                     *TSS    <---------ARR11(3) <---------ANAC46        ------->TEIL                                   ---------->DOF2    <---------YAB1              <------ZmHOX2a(1)--                                  ------->GAMYB     <----------DOF2           <---------SPL7     ----   tctctctgatttgatttttgaagaagagaattacaacgaaagaattagatatcgctataatttgttacttatatagacaccgtaggaatgtatgtataac  8454500                                                                      ------>ZmHOX2a(1)                                                                      <---------------AGL15                                                                     --------->TOE2(3)                                                                     <---------------AGL15                                                                     --------------->AGL15                                                                <---------ICU4                                                               <---------ATHB51         <---------ARR11(3)              ------>MYB83                                     <---------AHL20(2)       --------->ARR11(3)              -------->P          --------->YAB1               --------->AHL20(2)      --------->GLK1(1)             ------>ZmHOX2a(1)   --------->AHL20(2)      --------->TOE2(3)             <---------GLK1(1) ------->AHL20(2)        ---------->DOF2              <---------GLK1(1)     ----------->GT1 <-------- ----->TOE2(3)------>MYB46(1)------------>CBF   --------->ICU4 <---------ATHB12  ---------->DOF2   ataaaatatggaatcctaccaaaaaaaaaaagacaataaatattgaagtcaaaatgaaatctcaaataattcctaaaaatgaaaaaaggaaatcttactg  8454600                                                                                               ------                                                                                               <-----                                                                                               ------                                <---------ARR14(2)       --------->ARR11(3)                    <-----                                --------->ARR14(2)       <---------ARR11(3)                   -------                              <-------TEIL         <---------AHL20(2)            <---------ARR11(3)                          --------->ANAC58        --------->AHL20(2)             <---------ARR11(1)                          --------->ANAC46     --------->CCA1(2)                 <-----------ARR10                          --------->ANAC58    --------->ARR11(3)     <---------ZAT14          -------                <---------AHL20(2)  ------>ZmHOX2a(1)  <---------AHL20(2)        --------->ARR14(2)               --------->AHL20(2)  --------->TOE2(3)--------->YAB1>>>>>>>>>WRKY6<---------CCA1(2) <-- ---GT1       XXXXXXXXXXXXXXXXXXXX>MIR829.2  <<<<<<<<<RAP2.2    --------->WRKY38(1)     --------->TOE2(3)   ttttgtcaacttgttgaattaatacttcaaggcacatcctcatatttagatatataataaatcttgttgactatagttagccatatctatccataaatat  8454700                                 --------->AHL20(2)                                 <---------AHL20(2)                           ------>MYB83                                                          <--- --->ARR11(3)              ------>MYB46(1)        <---------ANAC46                     <-------GAMYB ----ARR11(3)             ----------->RAV1(1)     <---------ANAC58               <---------TOE1(3) --->AHL20(1)            ------->GAMYB      <---------AHL20(2)                   <---------TOE2(3)  < ----AHL20(1)           --------->MYB46(3) --------->AHL20(2)            <----------DOF2         ---- -->CCA1(1)           <-----------GT1    --------->TOE2(3)--------->AHL20(2)--------->ZAT6 ---------- -->RVE1(1)           <<<<<<<<<GT-1   <-----------GT1     <XXXXXXXXXXXXXXXXXXXXMIR783 <---------MYB46(3) --------DOF2     <---------ZAT6--------->AHL20(2)<---------ANAC58  ---------->DOF2   --------->MYB52(2)   ctttttagaatttgaatttagtattaaccaacaaaaaaatttacattaattttcttggaataaaatcgagtaaagctttcactaaggtttgttgagaaaa  8454800  ---------->DOF2 ------AHL20(1) ---------YAB1                               <-------TEIL --------->MYB46(3)                     <--- ----->AHL20(1)    --------->AHL20(2)    ------->TEIL    ------->TEIL       ---------->DOF2   ------- ->GT1----------->GT1           <---------YAB1      <---------AtLEC2     --------->TOE2(3)--------->ALFIN1   atattaaagagtgaaactgaattaaaaaaaacttatgtttatgtatgtgcatttccatgaaccagcatgtcataacataaaagcctagaggggagggtcg  8454900  Previous    Next  AGI:  At2g19500.1    Description:  CKX2 (CYTOKININ OXIDASE 2); cytokinin dehydrogenase. Identical to Cytokinin dehydrogenase 2 precursor (CKX2) [Arabidopsis Thaliana] (GB:Q9FUJ3;GB:Q9ZUP1); similar to CKX4 (CYTOKININ OXIDASE 4), cytokinin dehydrogenase [Arabidopsis thaliana] (TAIR:AT4G29740.2); similar to FAD linked oxidase, N-terminal [Medicago truncatula] (GB:ABN08744.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46081.1); contains InterPro domain FAD-binding, type 2; (InterPro:IPR016166); contains InterPro domain FAD linked oxidase, N-terminal; (InterPro:IPR006094); contains InterPro domain Oxygen oxidoreductase covalent FAD-binding site; (InterPro:IPR0060 Range:  from: 8451286    to: 8454437    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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