Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   ---------->DOF2                <---------AHL20(2)                                                         <---------ARR11(3)               <---------AHL20(2)                               --------->TOE2(3) --------->AHL20(2)               --------->AHL20(2)                 ------>MYB46(1)               <---------ARR11(3)           --------->ICU4                        ----------->RAV1(1)            --------->ARR11(3)      ----------->GT1                           --------->AtMYB61              --------->YAB1 <------   ---------->DOF2 --------->DAG2     <---------AHL20(2)<---------YAB1 <-------TEIL    ---------->DOF2 <---------HSFB2a(2)   <-------TEIL----------->GT1------>MYB83<---------YAB1---------->DOF2--------->ARR11(3)   attctaaaagataaaaattaaaaggttcaagttcaaatagttaatttagaccaacattttcattttcattagtttcatcaaagataatataaagctcttt  8445100                                                                               --------->AHL20(2)                                                                           --------->AHL20(2)                                                                           <---------AHL20(2)                                                                           <---------AHL20(1)                                                                           --------->YAB1                                                                           <---------ICU4                                                                           <--------ATHB1                                                                          --------->ICU4                                                                        --------->YAB1                                                                       <---------YAB1                                                                      --------->AHL20(2)                                                                      <---------AHL20(2)                                                                     --------->YAB1                        --------->TOE2(3)                         <--------ATHB1                      --------->AHL20(1)                          <---------AHL20(1)          <------              ---------->DOF2              --------->HSFB2a(2) --------->YAB1 --------->YAB1  <------     ----------->GT1  <---------ARR11(3)   <---------------AGL15  <---------ICU4              ------- --------->GLK1(2)    --------->ARR11(3)   --------------->AGL15  --------->AHL20(2)         -------- --------->ARR14(2)  --------->RVE1(1)    ----------------->AGL3  --------->YAB1<---------AHL20(2) <---------ARR14(2)  --------->CCA1(1)    ----------------->AGL2  <---------AHL20(2)         <------- ----DOF2   --------->YAB1        ---------->DOF2 ----------->GT1--------->ICU4<---------AHL20(2)   tcaaatctggtttatcaaaagaaatatcttaaaactcaaagtcttccaaaattagttatatgtattaataattttaataattttaattttagttattaaa  8445200                     <---------ANAC58                         --------->TOE2(3)       ----------->GT1  <---------TOE1(2)                    --------->ANAC58  ---------->DOF2    <---------ANAC46                        --------->ANAC58 ---AHL20(1)         <---------ANAC58                        <---------ANAC55(2) ---AHL20(2)        ---------->ID1                    <----------DOF2 -->AHL20(2) <---------AHL20(2)                       --------->TOE2(3)                  --------->AHL20(2) ->AHL20(2)  --------->AHL20(2)                   <---------CCA1(2)                    --------->TOE2(3) --AHL20(2) --------->AHL20(2)                 --------->GLK1(2)<---------TOE2(2)     --------->YAB1   ttttcaaagttgaaaaaaatttgtcgtatgtctatttgggaaacatgagtttctatctttaaaacgtaagtttccatcgtgtttccaaacataaattttt  8445300                                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                <---------ANAC55(2)                          <---------ARR14(2)              --------                <---------ANAC46                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                <---------ANAC58                             --------->ARR14(2)              --------                <---------ANAC55(1)                       ----------------->AGL1             --------                --------->ANAC55(2)    --------->GLK1(2)  <---------HSFB2a(2)      <---------ANAC46                <---------ANAC58--------->LBD16 <---------ANAC58                   <---------ANAC58             <---------MYB52(1)--------->HSFB2a(2)        <---------ANAC46   <---------LBD16 --------            <-------GAMYB      <---------HSFB2a(2)       <-----------------AGL1    <---------ANAC58        <---------ARR14(2)     <---------ANAC46 --------->ANAC55(2)         xxxxxxxxxxxxxxxx>smallRNA(i)        --------->ARR14(2)    <---------LBD16   <---------ANAC58 ----------->GT1  ------>NtERF2    --   aaaaaacgcgtttccgttacgtttttcatgtttccggagagtttctgttttcgtaacgtttcggaaatgggaaatagacctcggggcgagtttccatgca  8445400    <---------GLK1(1)                                        --------->GLK1(1) ->ANAC58                                                   --------->ARR14(2) ->ANAC58                                                 ------->GAMYB ->AtLEC2                                              ----------->RAV1(1)--------->TOE2(3) ->ANAC46     --------->MYB46(3)---------->DOF2  --------->AHL20(2)       ----------->GT1   --------- ------->TOE2(3)   --------->YAB1     <----------DOF2  --------->MYB52(1)----------->GT1 <-------TEIL   acctagatttcttctaaccaatagaaatgctcttaaaagcctttttttaaaaaaaatcaacagaaatgctcttaaatgttaaaaacaaatattcatgcca  8445500                                                                                          <---------GLK1(2)                                                                                        <---------ARR11(3)                                                                                        --------->ARR11(3)                                                                                        --------->AHL20(1)                                      <---------ANAC46                                 <---------AHL20(2)               ----------->GT1     <---------ANAC46                                  <---------AHL20(2)     ----------->GT1          --------->MYB52(2)                      <----------DOF2--------->AHL20(2)    <---------TOE2(3) <-----------GT1 *TSS   <XXXXXXXXXXXXXXXXXXXXMIR161.1       --------->AHL20(2) >AtLEC2  --------->ICU4   <----------DOF2 <-----------GT1     ---------->DOF2   <---------AHL20(2)   aattttgatgtaaaaatttgttattttcgctttagttgtgtcttatttcggtctggtcattttctcaaagcccttttagttatttatatatatattctct  8445600                                                               --------->GLK1(2)                                                              <---------GLK1(2)                                                              <---------ARR14(2)                                                         --------->LBD16                                                         ------>NtERF2<---------ANAC58                  <---------ARR11(3)                     ----------->RAV1(1)                  --------->GLK1(2)                     --------->ANAC46                      <------ZmHOX2a(1)         ---------->ID1                                 --------->ANAC58                      =======    <---------ARR14(2)               <---------ANAC58   --------->ANAC58                      =======    --------->ARR14(2)         <---------TOE1(3)       <---------LBD16<---------ANAC58      --------- --------->ANAC55(2)           <---------TOE2(3)------>ZmHOX2a(1) <----------DOF2       ------->GAMYB <---------ANAC55(2)       <----------DOF2  ------>ZmHOX2a(1) --------->ARR14(2)       --------->MYB46(3) <---------ANAC46 --------->ARR11(3) <---------ANAC58 ------>ZmHOX2a(1)   <---------ANAC46  ---------   gtctcgtatttgtccccaaaaatctagggttttaaggtttcttatccttcctcttcctccgccagattcttttcttgcgaagatgagcaacgacaaggac  8445700                                         <---------YAB1                                        --------->YAB1                                        --------->TOE2(3)                                     --------->YAB1                                   --------->AHL20(2)                               <---------RVE1(1)                              <---------AHL20(1)                              --------->AHL20(1)                              --------->ARR11(3)                              <---------ARR11(3)                            ----------->ARR10                            <----------DOF2 --------->ATHB12               ------>ZmHOX2a(2)   <---------AHL20(2)                  <------------------------ANAC81    ------->TEIL    <---------ALFIN1<---------YAB1                 <---------ARR14(2)   --------->AHL20(2) ====================HOX2a_HOX2a  --------->YAB1                   --------->ARR14(2)   <---------AHL20(2) =====================HOX2a_HOX2a<---------YAB1               <---------ANAC46         <---------WOX13(1) >ANAC58      <------ZmHOX2a(2)<---------CCA1(1)             ------>NtERF2    ---------->ID1     ---- >ANAC58<-----------HVH21<---------MYB52(1)       ------>ZmHOX2a(1)<---------GLK1(2) --------->ATHB12   agcatgaacatgtccgatctctccaccggtaagatattataatcttattgtcctatagaatgaggcctggattctcttttgttctcttgatttattgaaa  8445800                                                       <---------ANAC58                                                       <---------ANAC58                                                    --------->LBD16                                                    ------>NtERF2                                                   <---------ANAC58                                                   <---------ANAC46                                                   <---------ANAC58                                                  <---------LBD16                                              <---------ANAC58                                              <---------ANAC58                                              ------>ZmHOX2a(2)                                            <---------ARR14(2)                                 ------                                            --------->ARR14(2)                                <------                                            <-----------ARR10                               ---------                      <---------ANAC58      --------->ARR11(3)                    <-----------GT1                      <---------ANAC58     <------ZmHOX2a(1)           <---------TOE2(3) --------->ANAC46 <---------GLK1(2)    <---------ANAC46  =============HOX2a_HOX2a       --------->DAG2    --------->ANAC58 ------>DOF2 <---------ANAC46           <------ZmHOX2a(1)              <---------TOE1(3) --------->ANAC58   aaagcttctcttgttttgtgttttgcttatagctcttaacgaggaggatcgtgccgggcttgttaatgctcttaaggtgagttttttcttcacgatatga  8445900 <---------ANAC58 <---------ANAC58 <---------ANAC46                                                                                  <- --->ATHB12       <---------ARR14(2)                                                               <- ---YAB1  --------->ARR14(2)                                                                 <------- >CCA1(2) <---------ARR14(2)             <----------DOF2        ------>ZmHOX2a(1)  --------->ATHB12<-   tttgcgtatgactatctggagattgggctattcatctttgtaacttttagggattgttttctcttcctgactagttttgagaaattgatttgattcttat  8446000  Previous    Next  AGI:  At2g19480.1    Description:  NAP1;2/NFA2 (NUCLEOSOME ASSEMBLY PROTEIN1;2); DNA binding. similar to NAP1,3/NFA3 (NUCLEOSOME ASSEMBLY PROTEIN1,3), DNA binding [Arabidopsis thaliana] (TAIR:AT5G56950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45713.1); contains InterPro domain Nucleosome assembly protein (NAP); (InterPro:IPR002164) Range:  from: 8445538    to: 8448430    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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