Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ---------ZAT18 -------->ZAT18           --------->ANAC58 -----ARR14(2)            --------->ANAC46 ---->ARR14(2)       <---------ZAT18 -->LBD16          --------->ZAT14 --ANAC58          <---------ZAT18                                                       --------->TOE2(3) --ANAC46         ------>ZmHOX2a(1)                                                    --------->ANAC58 --ANAC58    <----------DOF2                                    <----------DOF2        --------->ANAC58 -LBD16<---------REM1(2)  --------->ANAC58          ------>ZmHOX2a(2)   --------->CCA1(2)--------->YAB1   tgcgcagtcttcacactttcctgcacacacacaaaaaaaactaagttttgatgatccaagttgggactttgaagagatgaaacactcacaagcttaatag  8443200                                                                                                 ----                                                                                                -----                                                                                               ------                                  --------->YAB1                                             --------                                 <---------ATHB12                    <---------AHL20(2)      --------                               --------->WOX13(1)                   --------->AHL20(2)       <-------                        --------->ARR14(2)                        <---------ARR11(3)         --------        <---------MYB52(1)  ------>ZmHOX2a(1)                     --------->ARR11(3)      <------ZmHOX2a(1)       --------->TOE2(3)<---------ARR14(2)                       <---------RVE1(1) --------->ALFIN1   caacttcttcgttagtctgaacatcagttcctgcaatcaaaacagtctcatcaaacgactattgaagagattttatatgtatagagaggggaggaacgaa  8443300    >>>>>>>>>GT-1  --------->At5g28300                 ------>NtERF2 ----------->GT1       <---------ATERF1(1) ----->DEAR3(2)        --------->At4g35610                                       ----------->GT1 -->TEIL               <---------At4g35610                                  <---------MYB59 --->MYB52(1)         --------->DEAR3(1)        <---------ARR14(2)         --------->ANAC58         < ->ANAC58        ---------->DOF2    <---------ANAC58                       --------->ANAC58         - ->ANAC58      ---------->DOF2      <---------ANAC58                --------->ARR14(2)    --------->TOE1(3) --MYB52(2)   --------->LBD16       <---------RAP2.6(2)             <---------ARR14(2)    --------->TOE2(3) ->MYB46(3)  --------->ANAC46      <---------LBD16        --------->ANAC46 --------->ANAC46     <----   ccgaggtaaatctctccgaaagagccgctcccaattttgcggccaaggcgaaacttgttcccaacacgaggttccatacccaattgaaaaaaccctaact  8443400                                  --------->HSFB2a(2)               --------->YAB1                              <---------GLK1(1)           --------->ZAT14        <<<<<<<<<GATA-1       --------->GLK1(1)           --------->ZAT18       <-----------GT1       --------->ARR14(2)     <------ZmHOX2a(1) ---------TOE2(3)            <---------ARR14(2) --------->LBD16    --------->ICU4 --------->ID1           <---------At4g35610  <---------LBD16  --------->ZAT18                  ----- ------DOF2         <-----------HVH21 <---------GLK1(1)   <---------ZAT14          <----------DOF2   ttgtggttttatctatctactacgtcgagcggatttctcgatttctcatgcggaggagagtgaagtgcgatgatcaaaactagggcttttgcgaagaaga  8443500                                                                                       --------->ANAC46          <---------ZAT2                <------ZmHOX2a(1)                              --------->ANAC58     --------->GLK1(2)                 ----------->GT1--------->GLK1(2)            --------->ANAC58   <---------HSFC1(2)             <------MYB46(1)   --------->HSFB2a(1)            --------->ANAC58   <---------HSFB2a(1)            <------MYB83      --------->HSFC1(2)       -------->P--------->ANAC58  ----------->ARR10              --------->MYB111(1)<---------HSFB2a(1)  --------->ANAC58 ---->ALFIN1 ----------->GT1     --------->MYB46(2) <---------HSFC1(2)   --------->ANAC58   ggggaagaatcgagcaggttgaaattggaagtgagtaggtgaggaaatttagggagattccatggtgttttggttaagcaaccagaagcaagcaagatga  8443600                                                                            <---------AHL20(1)                                                                            --------->AHL20(1)                                                                            <---------ARR11(3)                                                                           --------->RVE1(1)                                                                           --------->CCA1(1)            --------->ALFIN1                                           <---------AHL20(2)          --------->ALFIN1                                             --------->AHL20(2)         ------->MYC3                                              <---------AHL20(2)         <-------MYC2                 <----------DOF2              <---------AHL20(1)         ------->MYC2                <---------ANAC46              --------->AHL20(2)         <-------MYC3                <---------ANAC58              --------->AHL20(1) ----------->GT1        <---------ANAC58             <---------ANAC58         ------------>CBF <----------DOF2     <-        <---------ANAC46           *TSS  <---------AtMYB61    --------------->AGL15   <---------ANAC46        <---------ANAC58         <-------GAMYB<----------DOF2<-----------GT1--------->ARR11(3) ------      <---------ANAC46          <-----------RAV1(1)      <----------DOF2<---------AHL20(2)   --------   agaagactgcgcgtgtgtgtgtgtctcgcttagcctgttgcttttggtcttttctattccttttctcaatttattaaatatctttattcggtgaaaaaaa  8443700                                     <------ZmHOX2a(1)     <---------AHL20(1)           --------->YAB1     <---------ARR11(3)        --------->YAB1                                                     <--  ----------->GT1           --------->YAB1                                                     ------ ----------GT1           --------->YAB1                             ---------->DOF2            <----- --->AHL20(2)           <---------YAB1--------->ARR11(3)  ------>ZmHOX2a(1)                   <------ ->AHL20(2)         <----------DOF2<---------TOE2(3)     --------->TOE2(3)               <-------TEIL   tatacagtatatttcttagaaactttataataagaataaggattttgtttttatattttcctaaattccataaatctcttaagtttacaaattcatatat  8443800                                              <---------AHL20(2)                                              --------->AHL20(2)                                             <---------AHL20(2)                                             --------->AHL20(1)                                             --------->AHL20(2)                                             <---------AHL20(1)        --------->AHL20(2)                <---------AHL20(2)        <---------AHL20(2)              --------->AHL20(2)   <---------TOE2(3)                    <---------AHL20(2)  <-----------GT1                   --------->AHL20(2) --------DOF2               <---------HSFB2a(2) --->ARR11(3)               --------->HSFB2a(2)             --------->ATHB12 ----ARR11(3)    <-----------GT1   --------->AHL20(1)      <---------YAB1          --------->HSFC1(2) ---CCA1(2)    <---------MYB52(2)  <---------AHL20(1)    <---------ZAT6  <---------ANAC46    <-------   cttttaacatttaaacaaataaccagacttctagtaatatatataaatttatttagggagtgttattggtttgtgatgtattcgaagtttcagtgactta  8443900                                                           <---------ZAT6                                                         <---------ANAC58                                                         <------MYB46(1)                                                         <------MYB83                                                         <---------ANAC58                                                         <---------ANAC46                                                        <---------AtMYB61                                                        --------->MYB111(2)                                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                          <---------AHL20(2)                       --------->DAG2                                <---------ARR11(3)      --------->MYB46(2)        ---------->DOF2                                --------->ARR11(3) <---------TOE2(3)         ----------->GT1                            --------->YAB1--------->AHL20(2)              --------->ARR11(3)   <-----                           <---------ATHB12     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           ------                ---------->ID1  <---------GLK1(2) ---------->DOF2       <---------TOE2(3)    <-------     <---------YAB1<---------YAB1   <-----------GT1<---------TOE1(3)    <---------TOE1(3)   --------- --ANAC46  --------->GLK1(2)---------->DOF2     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)----------->GT1   aaatgttatgaagaatttgttgttattcaataaagatttttcaattttttgttaaagtttggtgttattagtttaagatttgtaaaaagtaatataaaat  8444000                                                                                          --------->YAB1                                                                                         <---------YAB1                                                                                        <---------AHL20(2)                                           --------->AHL20(2)                           --------->AHL20(2)                                           <---------AHL20(1)                           <---------AHL20(1)                                           <---------AHL20(2)                          --------->YAB1                                          --------->AHL20(2)                        <---------ICU4<--                                    ----------->GT1                                --------->ICU4 ---                                   --------->DAG2          <---------AHL20(2)    --------->YAB1   ---                             <---------AHL20(2)--------->AHL20(1)               <---------YAB1   ---- ----ARR11(3)          --------->YAB1     <---------AHL20(2)    --------->AHL20(2) <---------YAB1<--- --->ARR11(3)         <-------TEIL---------->DOF2  <---------ANAC46        --------->GLK1(2)    xxxxx --AHL20(2)   --------->ATHB12<---------YAB1   --------->AHL20(2)         <---------GLK1(2)  -------- >AHL20(2) <---------ZAT6    --------->AHL20(2)<---------AHL20(2)     ---------->DOF2 <---------YAB1   cttcataaatgtagagttattggattcatatttttataaagttattaaattttttgtgtaattcatttaaaacaaagaatctatgattattataatgaat  8444100  Previous    Next  AGI:  At2g19470.1    Description:  CKL5 (Casein Kinase I-like 5); casein kinase I/ kinase. similar to CKL2, casein kinase I/ kinase [Arabidopsis thaliana] (TAIR:AT1G72710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45666.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 8440693    to: 8443635    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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