Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->TOE1(3)                       --------->TOE2(3)                                             <---------TOE2(3)              --------->At4g35610                                                   <-----------GT1 -ZmHOX2a(1)--------->MYB46(3)                                              -------->P --TOE2(3)----------->RAV1(1)                           <-----------GT1    <-----------GT1   atggctcatttccaacagctacaaacctgaaaacacatccacaagagattagacatataaacattttgacaatgttcttaccagattaacattttcagag  8426500                                                                        --------->ANAC46                                                                        --------->bZIP60(1)                                                                 <---------ARR11(3)                                                                 --------->ARR11(3)                                                             <---------ANAC58                                               <---------------------WRI1 --------->MYB46(3)              ------>MYB46(1)                 ----------->GT1--------->ANAC55(2)              ------>MYB83             --------->ANAC58      <---------ANAC55(2)            ------->GAMYB              --------->ANAC58      <---------ANAC58        --------->MYB46(3)     --------->AHL20(1)           <---------TOE2(3)      <-----------GT1          <---------AHL20(1)          --------->MYB52(1)      <---------TOE2(3) --------->ATHB12              <---------ARR11(3)        <---------MYB52(2)--------->AtMYB61    -----   aattgatttcacaaccgaacacattagaaccaatatataacaagcagagggagaaactcactaacgtgatattgacaccaccattgaagttataacgagt  8426600                                                        <--------HAHB4                                                        --------->ATHB12                                                        <---------ICU4  --------->TOE1(3)                                                       --------->ICU4   --------->YAB1              <                  <----------DOF2                      <---------YAB1   --------->TOE2(3)           -           --------->ANAC58                       --------->At4g35610   --------->AtMYB61           -           --------->ANAC58  --------->YAB1       <---------At4g35610  --------->MYB46(3)           <          ------->TEIL     <-----------HVH21 --------->TOE1(3)        -------->P                ----- ------>HVH21   <---------ATHB12             --------->TOE2(3)<------ZmHOX2a(1)                ------   gacattcttatgaacccaatctttagctcggtcataacttcccataaccttaagctgatcattaggaatagcaaccataacttcaagaccagagccagaa  8426700                                                                                 <---------ANAC46     --------->YAB1                                                             <---------AtMYB61 ---------ZAT18                 --------->TOE1(3)                             <----------DOF2 -------->ZAT14              --------->DAG2                               <----------DOF2      ------ -------->ZAT18      --------->LBD16            <---------YAB1         <---------ALFIN1      <------- ---------ZAT14     --------->ANAC46         <---------TOE2(3)        --------->MYB46(3)--------->HSFC1(2) ---->DAG2         <---------LBD16    <----------DOF2    ------>ZmHOX2a(1)<---------DAG2<---------At4g35610 ---->DOF2 <---------ZAT18  ---------->DOF2  <---------TOE1(3)      <-----------GT1     <---------HSFC1(2)   agtgcactcatagtggtctcatccgcatcaaaaagcttaactttgttaatgttattgtccttaagcatttgaaccactttctttggtggaagcttatgtg  8426800                       ------>MYB46(1)                       ------>MYB83                          --------->MYB52(1)               ----------->HVH21                 <---------ICU4           --------->MYB52(1)             --------->At4g35610                --------->ICU4            ----------->RAV1(1)             <---------ZAT2          --------->YAB1         --------->TOE1(2)             <---------At4g35610  --------->TOE1(3)      <---------ARR14(2)             --------->ZAT2       --------->YAB1<---------ATHB12------->GAMYB             ------>ZmHOX2a(1) --->ALFIN1<-----------RAV1(2)    --------->TOE2(3)      --------->ARR14(2)    <---------GLK1(2) --ANAC46 --------->LBD16       -------->P      <---------YAB1 --------->MYB46(3)<-------TEIL   -----   tagccattgttccccagttgacacctagcccatctaccataacaatacccatgattccaaatccaacgacgaaggccaacagattcatcgtcctgagaaa  8426900                                                                                        <---------RVE1(1)                                                                                       --------->ARR11(3)                                                                            --------->LBD16 <--------           -------->P    --------->ANAC58                                 <---------LBD16   <--------        <---------ANAC58 --------->ANAC58             ----------->GT1   --------->ANAC46<---------CCA1(1)        <---------ANAC58 --------->ANAC46         --------->ZAT6     ---------->DOF2   <---------ARR11(3) --------->AHL20(2)    <-----------GT1 --------->TOE2(3)    --------->ARR11(3)         <---------ARR14(2) ------->CBF <-----------RAV1(2)       --------->TOE1(3)    <---------ARR11(3)  <------------CBF   caatgaaatggcttaccaggtgttttcacccaaattcaaacccttaacttgaacactcgtaaaatctcacttaaaccccagaaattgaagatatttacat  8427000                                                      --------->TOE1(2)                                                      --------->TOE2(2)                                                    --------->ARR11(3)               <-------TEIL                             --------->DAG2         <---------ARR11(3)              --------->ARR14(1)                 --------->YAB1               --------->ANAC58                     --------->ARR14(2)                <---------ATHB12              --------->AtLEC2                     <---------ARR14(2)              --------->WOX13(1)              --------->ANAC46                     --------->ARR11(1)  ------>ZmHOX2a(1)      --------->YAB1       --------->ANAC58                 ---------->DOF2 --------->TOE2(3)      <---------YAB1  <----------DOF2  --------->ANAC46  <----------ID1 ---GT1     --------->WRKY18(1)    ---------->DOF2  --------->GLK1(2)    ---------->DOF2      <------ -AHL20(2)  ------------>CBF---------->DOF2  <---------LBD16          --------->YAB1--------->CCA1(2)   tttcctaaatggaggtcaatcaaaacatcataaagttcaaagcttttcacgcaaaatctacgagataaccaaaaataaagccaaagatacgatttttaac  8427100                                                  --------->ANAC58                        --------->LBD16                                                  --------->ANAC58                       <---------HSFB2a(2)                                                 --------->WOX13(1)                 <----------DOF2                                              <-----------HVH21          <-----------GT1 --------->HSFB2a(2)                                             --------->YAB1    <---------GLK1(2)    <---------DAG2                             --------------->AGL15--------->AtLEC2 <----------DOF2<-----------------AGL1       --------->YAB1    <----------DOF2 --------->MYB46(3) <---------WOX13(1)   <-----------GT1 ----  --------->AHL20(2)  <---------ARR11(3)------------>CBF   <------------CBF   <----------DOF2   ----- -----GT1      --------->ZAT18      ----------->GT1    ---------->DOF2 <-----------GT1  <---------LBD16   aaaaaaaaatgagaatggggactagacctttccactgagagtaacaatcgtcaagcaaaaagattgattcttttttctctctttaacttttccggaaaaa  8427200                                    --------->At5g28300                                  <---------DEAR3(1)      <---------MYB46(3)                     <---------YAB1----------->GT1        <------MYB83               <----------DOF2  <---------WRKY18(1)       <------MYB46(1)              ------>ZmHOX2a(2) --------->MYB52(1)    --------->ATHB12                ---------->DOF2        <----------DOF2 <---------WOX13(1)--------->AHL20(2)                      <------MYB83     <---------TOE1(3)--------->ATHB12    --------->YAB1<---------WOX13(1)        ----------->GT1  -- ----->DAG2 <---------ARR11(3) ----------->HVH21     <---------YAB1               <------MYB46(1)---- ----->DOF2 --------->ARR11(3)<----------DOF2    <----------DOF2                 --------->MYB59 <---   aagttttaagctttgatctttctctgattgagcttgacggtgaataatatgctttgtgattggttcttggaacttggaagtatttggtaaaagcccaaat  8427300                                <---------AHL20(2)                                --------->AHL20(2)                                <---------YAB1                         --------->HSFB2a(2)                      <----------DOF2                              --------->MYB46(3)                      <---------DAG2                              >>>>>>>>>>>>>>>>>LFY                  <---------ZAT14                            --------->YAB1             --------->ICU4     --------->AHL20(1)           <---------ICU4 -------->DOF2<---------ICU4   --------->AHL20(2)           <---------AHL20(2) ----->AHL20(2)   <---------ZAT18                           <---------ATHB51    <---------YAB1 ------AHL20(2)   --------->ZAT14                     ----------->GT1       <----------DOF2   taaaagttttaagtaaacattgcacttttagaattttattgtattgtttttatggtcagtaaataatgacccaatgtgttttatgtttgacaaatgtttt  8427400  Previous    Next  AGI:  At2g19440.1    Description:  glycosyl hydrolase family 17 protein. similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT1G64760.1); similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT1G64760.2); similar to glycosyl hydrolase family 17 protein [Arabidopsis thaliana] (TAIR:AT3G04010.1); similar to beta-1,3-glucanase, acidic [Coffea arabica] (GB:AAQ90287.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83571.1); similar to Glycoside hydrolase, family 17; X8 [Medicago truncatula] (GB:ABN09816.1); contains InterPro domain Glycoside hydrolase, family 17; (InterPro:IPR000490); contains InterPro domain X8 (InterPro Range:  from: 8425246    to: 8426888    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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