Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             <---------ARR11(3)                                                                                        <------ZmHOX2a(1)                                                                                      <---------TOE2(3)  <---------AHL20(2)                                                                  <---------TOE1(3) ---------AHL20(2)                                                              <---------RVE1(1) ------->AHL20(1)                 ---------->DOF2                              --------->ARR11(3) --------AHL20(1)     --------->ANAC46                                         <---------GLK1(2) ---->AHL20(2)   <---------ARR14(2)                                            <---------ARR11(3) -----AHL20(2)   --------->ARR14(2)                 <---------ATHB12   --------->MYB52(1)  --------->ARR11(3)   atatatttttaactaagaaaatccacttaagtctcttaaagtcactaaaatccaatctttaaaatgttttcaataacagaagatttttaaggagatttta  8421800                                                                                                   --                                                                                            ---------                                                                                         <---------TOE1(2)                                                                      --------->MYB52(2) <---------TOE2(2)                                                                --------->CCA1(2)       ------>ZmHOX2a(1)                                               <---------ICU4   <---------GLK1(1)   <---------ARR11(3)                                               --------->ATHB12 --------->GLK1(1)   --------->ARR11(3)                                               --------->ATHB51--------->ARR14(2)  --------->RVE1(1)                                              --------->ICU4   <---------ARR14(2)  <---------GLK1(1)                                              <---------YAB1  <------ZmHOX2a(1)    --------->GLK1(1)                                            --------->YAB1--------->TOE1(2)       <---------ARR11(3)        --------->AHL20(2)       <----------DOF2  --------->AHL20(2)<---------MYB52(1) --------->TOE2(2)  ----------->GT1          <---------YAB1  <-------TEIL   --------->TOE2(2)       --------->ARR11(3)<   aaatcagtaattcaatagcattagatttcatgatacttttaaaaattcataattgaataacataggatatgttagtttgaataagatatcctaggtgtta  8421900                      <---------CCA1(1)                      <---------RVE1(1)                     <---------ARR11(3)                     <---------GLK1(2)                     --------->ARR11(3)                                                   <---------AHL20(2)              --------->DAG2                                               --------->AHL20(2)  <-----   <---------------AGL15                                                   <---------AHL20(2)  ------   ====================================================================================MADS_MADS   --------------->AGL15<---------AHL20(2)                             --------------->AGL15  ------- ------->AHL20(2)  ----------->ARR10                          <---------MYB59             --------->AHL20(2) -->GT1     ---------->DOF2 <-----------GT1                  --------->ANAC55(2)    ----------->GT1 -----------GT1----------->GT1                             <-----------GT1--------->YAB1 --------->AHL20(2)   atttactatttttaaaaaggtaagattttttttcatgtttttaaaaaatgtgagagtttttttacctatttttctattaaaatgaaatgtataaaattaa  8422000                              <---------ICU4                                                <--------                           <---------AHL20(2)                                              --------->AHL20(2)                  <-----------GT1                                                          <---------AHL20(2)              <---------AHL20(2)                                                           --------->AHL20(1)              --------->AHL20(2)                                                       <---------AHL20(1)             <---------AHL20(2)                                                        --------->AHL20(1)        --------->AHL20(2)--------->AHL20(2)         <---------YAB1                    <---------AHL20(2)        <---------AHL20(2)<---------AHL20(2)   <---------ARR11(3)                      --------->AHL20(2) ----AHL20(2)--------->AHL20(1)                --------->AHL20(1)                     <---------AHL20(2) --->AHL20(2)--------->AHL20(2)              ------->TEIL                <-----------GT1   <---------AHL20(1) -->AHL20(2) <---------AHL20(1)  <-----------GT1   <-----------GT1     <---------YAB1 --------->AHL20(2)   aattttgtttttaaataaaattactaaattaaatattacaaaatatgtatatattactatttagaattcaaatattatcgatacaaaattaaatttattt  8422100                                                               --------->AHL20(2)                                                               <---------YAB1                                                               <---------AHL20(2)                       ----------->GT1                        <---------AHL20(1)                    --------->STY1(2)                         --------->AHL20(1)                    <---------STY1(2)                         --------->AHL20(2)                    <---------ZAT2                    ----------->GT1                   --------->ANAC58               --------->ANAC46                                <--                   --------->ANAC58               --------->ANAC58                       <---------DEAR3(2)               --------->ANAC58                   --------->ANAC58          <-----------GT1<---------               --------->ANAC58   ------>ZmHOX2a(2)<---------STY1(2)--------->MYB52(1) <------------- -AHL20(2)     --------->ANAC46  <---------WOX13(1)--------->STY1(2)<-----------GT1    <-------------   cttcaattcgtctatttaagcaagctagtaatttgatcgacaaaaaaaaaacaagctagtaaaatataattaacagaattactaaatcggccggtttagg  8422200                                                                          --------->GLK1(1)   <----------DOF2                                           --------->ANAC58  <---------ANAC58            --------->MYB46(3)    <---------ANAC58  --------->LBD16              --  <---------ANAC58       --------->ANAC46           <---------ANAC58 <---------LBD16       <------ZmHOX2a(1) ----------CBF        --------->ZAT18               <---------ANAC46<---------LBD16     --------->At4g35610 -DOF2                <---------ZAT18              <------NtERF2<-----------HVH21    --------->At4g35610 ----AG            <------------CBF      *TSS     ------>NtERF2--------->YAB1     ---------->DOF2  <- ----AGL1       ------------>CBF      ----------->GT1        --------->ANAC58  ---------->DOF2<------   gattgctttctctcagtcgtcaattgcactaaaccactggtggtaatatcgctggcgtttcgcaagtatcaccgggaattgcaaagaagcagaggaccat  8422300                                                                                    <---------ARR14(2)                                                                                    --------->ARR14(2)                                                                           --------->DEAR3(1)      --------->ANAC46                                                   ------->TEIL  --------->DEAR3(1)      --------->ANAC58                                                  <---------ALFIN1           --      --------->ANAC58                                                 <---------ABI4(2)         ----   <---------ARR14(2)                                                 --------->ANAC46 ------->GAMYB<   --------->ARR14(2)                                                 --------->ANAC58--------->DEAR3(2) ----->TEIL                            --------->GLK1(2)              --------->ANAC58--------->MYB46(3) --------LBD16                  --------->ZAT14                       <---------ANAC55(2)       <---- ------------SPL14              <---------ZAT14     <------ZmHOX2a(1) --------->ANAC55(2)----------->RAV1(2)   gtacggagacgctacaaactggaatgaagatgagtatagagaatcaattttgaaggagcgagagatagagacacgcaccgtcttcagaaccgcctgggct  8422400         <---------ARR14(2)         --------->GLK1(2)        <---------GLK1(2)  --------->LBD16                                                      <---------ZAT18  ------>NtERF2                                                        <---------ZAT14 <---------DEAR3(1)             <---------REM1(1)                      --------->ZAT14 ---->ZmHOX2a(1)             <-----------RAV1(1)           <----------DOF2    <---------ANAC58 ----->ATERF1(1)             <---------MYB46(3)           <---------ANAC58    <---------ANAC58 ---------LBD16        --------->ANAC58                   <---------ANAC58    <---------ANAC46 -----ATERF1(1)        --------->ANAC58              <----------DOF2 --------->ANAC46   cctccggcgagaatctctaatccagacgcatttgttgtagcctccagcgatggaactttagctttccattcactgaactcgcttgtgtctcaatcggcga  8422500                                      ----------->RAV1(2)                                --------->At4g35610                                <------NtERF2                     --------->ARR11(3)                                <---------At4g35610              <---------HSFB2a(1)                               <---------MYB46(3)                --------->HSFC1(2)                     <---------ARR11(3)--------->TOE1(2)         <---------HSFC1(2)                     --------->ARR11(3)--------->TOE2(2)         --------->HSFB2a(1)                --------->WRKY18(1)  ------->TEIL            --------->ANAC46             --------->DAG2   <---------RAP2.6(2)            --------->ANAC58           ---------->DOF2 <---------AtMYB61                 --------->ANAC58  <---------YAB1         --------->ANAC46  <---------YAB1               --------->ZAT18      --------->YAB1        --------->HSFB2a(2)=======================RAV   <---------ZAT18     <---------YAB1        <---------HSFB2a(2)<-----------RAV1(1)   <---------MYB46(3)   ------>ZmHOX2a(1)   gttttggctactcgaaaggtcaagatgttatggtggctgaacctgagagagtggttagggcacacgaaggtcctgcttatgatgttaagttctatggtga  8422600                                                <---------WOX13(1)                                              --------->ATHB12                   --------->MYB59           <---------YAB1           <---------YAB1          ------>ZmHOX2a(2)                   <---------TOE2(3)    <----------DOF2             --------->YAB1          <--------         <----------DOF2        <---------CCA1(2)         <----------DOF2                   ---------   agacgaagatgctttgctacttaggtagagacttaaatctctctttgttgattgatgagtctttgatgaattgtaattgagagtttgaaattttgatctg  8422700  Previous    Next  AGI:  At2g19430.1    Description:  transducin family protein / WD-40 repeat family protein. similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT3G49660.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65325.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 8422241    to: 8425042    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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