Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      ------->GAMYB                                 ----------->RAV1(1)                              --------->ANAC58                      <------ZmHOX2a(1)                        <----------DOF2          --------->ANAC58            --------->YAB1    --------->ANAC46       --------->ZAT6                     --------->ANAC58 ------ICU4==================HOX2a_HOX2a           <-----------GT1 ---------->ID1    <---------ATHB12 ----->YAB1<------ZmHOX2a(2)  --------->ANAC58  <----------DOF2--------------------->WRI1 --------->YAB1   catgacataagcgatcacaatggaggagacaccagcaacagcataagaagctttaacactcttggctttgttcttatcaagcgctaaatcaagcataaca  8382500                                                                       --------->ANAC58                                                                       ----------->HVH21                                                                       <---------ETT(1)                                                                       --------->ANAC58                                                                  --------->ANAC46                                                             --------->WRKY12                                                            --------->DOF5.7(2)                                                  --------->AHL20(1)   --------->ANAC46                             --------->LBD16      --------->ARR11(3)  --------->DEAR3(2)                            --------->HSFB2a(2)   <---------AHL20(1)  --------->MYB46(3)                            <---------HSFB2a(2)--------->YAB1--------->WRKY38(1)                         ------->TEIL         <---------ATHB12    ----------->HVH21--------->MYB52(1)                   ------->TEIL       --------->ARR11(3)    <---------MYB52(1)  --------->ANAC46    -           --------->HSFB2a(2)        <---------ARR11(3)   <-------GAMYB----------->RAV1(1)         <   atcccaattccaccgagaacgaacatgaatccagaagagagaccttcaatgatatattgcccgttaacccgacccgacataaacacaacgggtcgaatag  8382600                           <---------GLK1(1)                           --------->GLK1(1)                          <---------ARR14(2)                          --------->ARR14(2)                  <---------LBD16              ------>ZmHOX2a(1)                             --------->ARR14(2)              ================HOX2a_HOX2a                   <---------ARR14(2)          <------ZmHOX2a(1)              --------->LBD16                            --------->ANAC46              ----------->GT1            ------>ZmHOX2a(2)                            --------->ANAC58         <------MYB46(1)           <------ZmHOX2a(2)                             --------->ANAC58         <------MYB83          <---------ARR14(2)    --------->LBD16    <---------ANAC46              --------->MYB111(1)          --------->ARR11(3)   --------->ANAC46 <---------ANAC58                 --------->MYB59          --------->ARR14(2)  <---------LBD16   <---------ANAC58--------->LBD16  --------->MYB46(2) -------->HSFB2a(2)    ------>ZmHOX2a(2)        --------->ANAC55(2)          --------->DAG2 ---------HSFB2a(2)----------->ARR10            <---------ANAC55(2)         ---------->DOF2        <-   ttccagtagtcggatcctgagttgatccgatacccggaggctcgacaattacgtcgtagacgaaaccggagactactaaaaagtaggtaaggagaattag  8382700                                                               <------NtERF2                                                             <---------DEAR3(1)                                                             --------->ETT(1)                                                          <---------MYB46(3)                                                          --------->MYB55(2)                                                         <---------AtMYB61                                                      --------->ALFIN1                                                      <------NtERF2                                                      <---------DEAR3(1)                                                    <---------ANAC46           <---------At4g35610                     --------->ATERF1(1)           --------->At4g35610      <---------GLK1(2)------>NtERF2         <---------WRKY38(1)<---------DOF5.7(2)    <------NtERF2                  --------->ARR14(2)         <---------WRKY12 --------->DOF5.7(2)     <---------DEAR4(2)              <---------ARR14(2)  --------->ARR14(2)    <---------ANAC46          <---------ATERF1(1)            <---------HSFB2a(1)  <---------ARR14(2)    <---------ANAC58         <---------DEAR3(1)   --------->YAB1  <---------ZAT14       <---------ANAC58        --------->ATERF1(1)--------->CCA1(2)       --------->DAG2 --------ANAC46        <-----------------------TaNAC69(2)--------->ALFIN1       ----------->ARR10  --   agcgtatacagtcatcggagaaggaagcgtgaacgatggaatcttcagacggaggcgcggtggtcggagaaatgagaatgggacgattcggagaaggtgg  8382800                                                               ------>ZmHOX2a(2)                                                               ==============================HOX2a_HOX2a                                                              ===============================HOX2a_HOX2a                                                              <------ZmHOX2a(2)                      ------>ZmHOX2a(2)                      --------->ARR11(3)                     <---------At4g35610                     <---------ARR11(3)                ------                     --------->At4g35610                     --------->ARR14(2)               -------               <------ZmHOX2a(1)                             <---------AGP1                   <------               ==============HOX2a_HOX2a                     <---------ARR14(2)              --------             <---------TOE2(3)                              <---------ARR14(1)               <-------          <XXXXXXXXXXXXXXXXXXXXMIR843                   <---------ARR14(2)                 *TSS======       <-------TEIL <---------AGP1                      --------->ARR14(2)                <---------TOE1(2)       ===============HOX2a_HOX2a                       --------->GLK1(2)             ------>ZmHOX2a(1)       ------>ZmHOX2a(2)                             <---------ANAC58                 ===============      <------ZmHOX2a(2)    --------->DEAR3(2)        <---------ANAC58              --------->HSFB2a(1)      ================HOX2a_HOX2a               <---------MYB52(1)                --------->ARR14(2)     --------->ARR14(2)   ------->TEIL         <---------DEAR3(2)                 <---------ARR14(2)     <---------ARR14(2)----------->HVH21     --------->ATERF1(1)           <---------AHL20(2)<------- ------->KAN4(1) <---------WOX13(1)          <------NtERF2  <---------CCA1(2)<-----------GT1<--------   aatattggatccattgaggattgatctgaaccgtctgatacactggagccggtttgcgaatcggatcttggagccattttatcgaatcctccttggatct  8382900  ------>ZmHOX2a(1) >ZmHOX2a(2) -->GLK1(1) ---GLK1(1)       --------->ANAC46 ->ARR11(3)      <---------LBD16                                  --------->DAG2 --ARR11(3)    <---------ETT(2)                                  ---------->DOF2           --------->MYB52(1) ========HOX2a_HOX2a                                          <------ZmHOX2a(1)          --------->MYB46(3) =HOX2a_HOX2a  --------->ETT(2)               <----------DOF2 --------->YAB1     --------->ANAC58 --AGP1  --------->ANAC58               <------------CBF  --------->TOE1(2)      --------->ANAC58 -CCA1(2)--------->ANAC58  <------ZmHOX2a(1)  --------------->AGL15              --------->ANAC46----   cttcctctctcaccctatcgacggaatcaggaagagtttcagaattggctttgtttggaaactaggataaagctatccattacacgaataaacaaacgtc  8383000                                   <---------YAB1                          <---------HSFB2a(2)                         <---------LBD16                                    <---------AHL20(2)                         --------->LBD16                                    --------->AHL20(1)                     <-----------GT1       <-------TEIL  <---------DAG2     <---------AHL20(1)           <----------DOF2--------->HSFB2a(2) ---------->DOF2               --------->AHL20(2)      - ----->WOX13(1)    <---------AHL20(2)---------->DOF2     <----------DOF2   --------->AHL20(2)       -   tatcaatttccttctttcgattttatccccagaagttatcaaagatgcaaaagagaccactttagttctaacttgtattaaattagaaaattcagactat  8383100                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                          --------->ANAC46                                                                              <---------TOE2(3)------                                                                           --------->AHL20(2)  ------                                                                          <----------DOF2 --------->ANAC58                                                                        <---------RAP2.6(3)    <-----                          --------->ARR11(3)                           <---------ANAC46   --------->ANAC58                          <---------ARR11(3)                     <---------ARR14(2)     --------->MYB52(1) -------->ANAC55(2)       --------->ARR14(2)                     --------->ARR14(2)   --------->MYB46(3) -------->YAB1            <---------ARR14(2)             --------------------->WRI1   <---------MYB52(2)   tttcgtaattttgttagaaatttgagactatcttcgtaattttctcacaaaatttcttagtttggacgttctgccgttttaatgtataacaaacgacacg  8383200                                          <---------TOE1(3)                                          <---------TOE2(3)                                         <---------DOF5.7(2)                                 <-------GAMYB                                 <---------ANAC58                                 <---------ANAC58                                <---------MYB46(3)                                <------MYB46(1)                                <------MYB83                             --------->CCA1(2)                             --------->ARR14(1)                            <---------ARR11(3)                            --------->ARR11(3)                            <---------ARR14(2)                                      *TSS  ---------->DOF2                      --------->LBD16  --------->DOF5.7(2)                 ------>ZmHOX2a(1)                    <---------LBD16   <----------DOF2                      <---------------AGL15                  --------->GLK1(2)  <---------ANAC46                      --------------->AGL15      --------->TOE2(3)   ----------->ARR10                                ========================== --->ANAC58       --------->ARR14(2) <---------ANAC58                 <---------ANAC58--------->ANAC58 --->ANAC58  ----------->GT1--------->ARR14(2)                <---------MYB52(1)  <---------TOE2(3) ----O2     <---------WOX13(1) <---------AtMYB61             <-----------HVH21  <---------DOF5.7(2) --->ANAC55(2)    <---------ARR14(2) <---------ANAC58        <-----------TGA1   ---------->DOF2 --->ANAC46<------------CBF --------->ARR11(1)    --------->GLK1(2)   <---------ANAC58--------->ANAC58 ----ANAC55(2)   <---------GLK1(1)<--------P ---------->DOF2--------->ANAC46  --------->DOF5.7(2)   tagttctatcttagattgaaaatccggcaagatttggttgctttaacgaaagtatctatctcccgtcatcttgcttcctcgttaaaggaagcaaaagagt  8383300                                             <---------ZAT2                                             <---------At4g35610                                             --------->ZAT2                                             --------->At4g35610                                             --------->TGA1a                                             <---------TGA1a                                     <----------DOF2  ============MYC_MYB                                     ==================bZIP_DOF                                     ==================bZIP_DOF                                     <---------DAG2   --------->O2                                   <---------At4g35610<---------O2                            --------->ARR11(3)        <---------TGA1a                       =========================================bZIP_DOF                       =========================================bZIP_DOF                       <----------DOF2       --------->ANAC55(2)               <----------DOF2------>ZmHOX2a(2)       --------->TGA1a              --------->ZAT14               ========================================bZIP_DOF                    <---------ZAT18               ========================================bZIP_DOF       <---------ARR11(1)         <------NtERF2<---------HSFC1(2)     =====================MYC_MYB          <---------ZAT14       <---------DEAR3(1)   <---------ARR11(3) ----------->HVH21      --------->ARR11(3)     <-----------HVH21<---------HSFB2a(1)    <---------O2            <---------CCA1(2)  ------>ZmHOX2a(2)   --------->HSFC1(2)     --------->O2 <-------GAMYB         --------->LBD16 ========HOX2a_HOX2a  --------->HSFB2a(1)  <-----------RAV1(2)<---------YAB1  <---------LBD16<-------   ttgatcccgtcgtcgagctttcgaactttcgatcttcagcttttctcaggtgacagacgtcgttgtgattcaaatctttttccggtgaacttaatttcgg  8383400  Previous    Next  AGI:  At2g19340.1    Description:  membrane protein, putative. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G29870.1); similar to hypothetical protein MtrDRAFT_AC155895g20v2 [Medicago truncatula] (GB:ABN08370.1); contains domain PTHR13160 (PTHR13160); contains domain PTHR13160:SF2 (PTHR13160:SF2) Range:  from: 8380848    to: 8382891    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g19350.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G29850.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75495.1); contains InterPro domain Protein of unknown function DUF872, eukaryotic (InterPro:IPR008590) Range:  from: 8383284    to: 8384425    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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