Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             --------->ANAC58                           --------->ANAC58                        <------NtERF2                     --------->At4g35610                     <---------At4g35610                     <------NtERF2                     <-------GAMYB                    <---------RAP2.3(1)                                                            <-                    <---------DEAR3(2)                                                             <-                   <---------At1g77200                                                             <-                   --------->ETT(1)                                                          --------                   <---------DEAR3(1)                                                        --------                   <---------RAP2.6(2)                                                       <-------                   <---------DREB2C(2)                                                       <-------            <---------ARR11(3)                                                               --------            --------->ARR11(3)                               --------->AHL20(2)        <-----------GT1 <----------DOF2   <---------RAP2.3(3)                    --------->YAB1          <----------DOF2  <- ---------DAG2    --------->RAP2.6(3)                --------->AHL20(2)   <-----------GT1    <-------   tcccttttgatgaagatgttgtcggctgcaagacaaatgtgaacaaagactgcatttaaaacataatatacaaaattttcaagtcttttctacaatatat  8373700      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)      --------->GLK1(1)      --------->CCA1(2)     <---------ARR11(3)     --------->ARR11(3)                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) --------ANAC46                             --------->At4g35610 --------ANAC55(2)                    ---------->DOF2                                      ------>ZmHOX2a(1) --------ANAC58                      <---------AHL20(2)                                --------->ARR14(2) ->ARR11(3)                          <---------ATHB51                                  <---------ARR14(2) ->AHL20(1)                       --------->AHL20(2)                                  <---------GLK1(1) --AHL20(1)                      <---------AHL20(2)        --------->YAB1       <xxxxxxxxxxxxxxxxxxxx --AHL20(2)                      --------->AHL20(2)  --------->ANAC46          --------->GLK1(2) ->AHL20(2)  --------->ALFIN1 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)            --------->ARR14(2) --------ANAC58          ------>ZmHOX2a(1)  <---------At4g35610   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) --ARR11(3)<---------O2xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)---------->DOF2    <---------ARR14(2)   <   ttcgtaagatatcaagtggctcaattcctacacaaataaataatgcagcaaaactacacaatgaaagcccaaacaagagacaatctgcaaatcctattct  8373800                                                                                            ---------                                             --------->AtLEC2                              ------>MYB46(1)                                             --------->ANAC58                              ------>MYB83                                             --------->ANAC46                             --------->ANAC46                                           ---------->DOF2         --------->WOX13(1)   --------->MYB46(3)        --------->LBD16                  ------>ZmHOX2a(1)        <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->ANAC58  --------->YAB1          -------->P        ------>NtERF2             <---------GLK1(1)     <---------AHL20(2)             ------>MYB46(1)      <---------LBD16      <---------HSFB2a(2)      --------->ATHB12                   ------>MYB83 xxxsmallRNA(si3)          --------->HSFB2a(2)     <---------ATHB12<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) -----------GT1         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <-------TEIL         XXXXXXXXXXXXXXXXXX   attttctctccggcttacctatatgttttctagtagaattctcctacaagcaaatgatttaaaattcataaatcaaatgtaagagaccctaccaacaact  8373900                                                                                                 ----   --------->AHL20(1)                                                                            ----   --------->AHL20(2)                                                                          ------   <---------AHL20(2)                               ----------->GT1                           -------   <---------AHL20(1)                              --------->DAG2                         <xxxxxxxxxx  <---------AHL20(2)     ---------->DOF2         ---------->DOF2                        ---------->DOF2  --------->AHL20(2)   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                   ------>ZmHOX2a(1)<----- >MYB46(3)      --------->ANAC58             <---------ZAT14         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) XXX>MIR856     --------->ANAC58         <------NtERF2              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   ccaaataaattttgcaacaagacaaaacaaagttaacaatggcagagtatagaaaggtaaactaaactcacatctatctcctccaaacccaaaagaacca  8374000                                                   <----------DOF2                                                   =================bZIP_DOF                                                 ------>ZmHOX2a(1)                                           <---------HSFC1(2)                                           --------->HSFC1(2)                                           <---------HSFB2a(1)                                           --------->HSFB2a(1)                                          --------->ANAC58                                      <------ZmHOX2a(1)                 <<<<<<<<<TBF1                                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                    <-------              --------->HSFB2a(2)  <---------HSFB2a(2)       <-----------GT1              <---------AHL20(2)     <---------CCA1(2)             <---------HSFC1(1)       ----------->HVH21             <---------- -->MYB83<----------DOF2   =========================================bZIP_DOF        <---------DAG2 -->MYB46(1)  <---------HSFC1(1)   --------->HSFB2a(2)     <-----------HVH21        <----------DOF2 --->AtMYB61  --------->HSFC1(1)--------------->AGL15     <---------bZIP60(1)   --------->MYB46(3) -->MYB46(3)  <---------HSFB2a(2)  --------->HSFC1(1)     --------->TGA1a       <---------MYB111(2) < xxxxxxxxxxxxxsmallRNA(fl3)<----------DOF2--------->ANAC58=====================================bZIP_DOF ----ALFIN1  <---------LBD16    <---------------AGL15     --------->bZIP60(1) <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   ccctctcgtttcttttctggaagcattttcttttcttctaggagaagcatcctctttctcatgtcacagttttcttcttccaacaactttattttctttc  8374100                                                                                           <------ZmHOX2a(2)                                                                                           --------->CCA1(2)                                                                                          <---------ARR11(3)                                                                                          <---------AGP1                                                                                          --------->ARR14(2)                                                                                          --------->AGP1                                                                                          <---------ARR14(2)                          ---------->DOF2                                                 --------->ARR11(3)                       --------->TOE2(3)                                                  --------->ARR14(3)                       --------->TOE1(3)                                                  <---------ARR14(3)                    ------>MYB46(1)                                            <---------ANAC58                    ------>MYB83                                               <---------ANAC58 <-----------ARR10<---------MYB59                     <---------ANAC58        <---------TOE2(3) ---DOF2       <-----------GT1                        <---------ANAC58       <-----------GT1------>ZmHOX2a(2) -GT1        <----------DOF2     <---------GLK1(2)    <---------ANAC46      ----------->HVH21  ------ ---------CCA1(2) <---------MYB46(2)     <---------CCA1(2)          <---------ANAC46<-----------GT1   tcatatctaagtgttctttaccaaaccataaaacagtttcttcaaatctctagtttgtgtgagtcttcttatgtgtatttgacgtttcacaagatctgaa  8374200                                                                            ----------->RAV1(2)       --------->YAB1                                                      -------->P             ---      --------->AHL20(2)          <---------AHL20(2)                   --------->YAB1          <-----  ------------>CBF             ----------->GT1     --------->DAG2   --------->YAB1            <xxxxxx ---->DOF2 <------------CBF   ----------->GT1     ---------->DOF2 ------------>CBF     ---------->DOF2   agtatacaataaatattgtccataggtatcatgtgttaaatttcaaaaaacaaaaagtttctaatatcaacaatactaacctgatacgatatagcccatg  8374300                                                                                          <---------AHL20(2)                                                                                          --------->AHL20(2)                                                                                        <---------AHL20(2)                                                                                        <-----------TBP                                                                                        --------->AHL20(2)                                                                                      <-----------TBP                                                                              --------->ATHB51                                                                              --------->YAB1                                                                              <---------ICU4                                                                             --------->ICU4                                                                             <---------ATHB12                                                                         ------------>CBF <----------                                             <---------YAB1              ----------------->AG                                           --------->ATHB51              <-----------------AG                                           <---------AHL20(2)            <-----------------AGL3                                    --------->ANAC58                     ----------------->AGL3                                    --------->ANAC58            ----------->GT1     <-----------TBP                                    --------->ANAC46           <------ZmHOX2a(1)<---------TOE2(3)                                    <---------ANAC55(2) --------->ARR14(2)<---------------AGL15      ---------->DOF2            --------->ARR14(2)     --------->GLK1(2)----------------->AGL2     < ---->TEIL                       <---------ARR14(2)     <---------ARR14(2)--------------->AGL15   --- ----ATHB12<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <------ZmHOX2a(1)    <-----------------AGL2  ---- xxxxxxxxxxsmallRNA(i) ---------->DOF2     --------->AHL20(2) ----------->GT1<---------ATHB51    <---   aatccagtgaaagaagtcactgcaaaaaaggcatgaatacgcgaattatttttaggagaatatgaggagaaaaatcccaattatggatatatatatatag  8374400              <---------YAB1              --------->ICU4           <---------YAB1                                                                          <-    <----------DOF2                                                                 --------->AHL20(1) <---------ARR11(3)                                                                 <---------AHL20(1) --------->ARR11(3)                                                                 <---------AHL20(2) -TBP    <---------At4g35610                                                        --------->AHL20(2) ---------CCA1(2)                                                        ------->GAMYB  ----------->GT1 ------>CCA1(2)          ------>ZmHOX2a(1)                 --------->ARR11(3)      <---------AHL20(2) ----->ARR11(3)         --------->TOE2(3)                  <---------ARR11(3)      --------->AHL20(2) ------ARR11(3)  <---------TOE2(3)                <-------TEIL         --------->At4g35610   <-------   atatatcttttagatgattatggattcctaaaaaaacatagaaatgtataggtacataagagatacttatagcatccgactcaaaataaattgtatatat  8374500                                                                                   <----------DOF2 --------->At4g35610               <------ZmHOX2a(2)                            <---------AHL20(2) <---------At4g35610    --------->ZAT6               ---------->DOF2      <---------DAG2 --------bZIP60(1)    <-----------GT1--------->WOX13(1)                   <----------DOF2 --ARR14(2)         <---------WOX13(1)  --------->YAB1            <-------TEIL  <-----------GT1   ggcatcagactcaacatagttgattaacactatttcgatcaatcttgattttggctaaagtttggaaatacatatactttattttctttttaaaaattgt  8374600  Previous    Next  AGI:  At2g19290.1    Description:  unknown protein Range:  from: 8373001    to: 8374104    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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