Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->ETT(1)                                           <-----------RAV1(1)                                         --------->CCA1(2)                                        <---------ARR11(3)                                        --------->ARR11(3)                                        <---------ARR14(2)                                        --------->ARR14(2)                                      ----------->ARR10                                     ------>NtERF2                                   <------NtERF2                                  ------>NtERF2                                 --------->DEAR3(1)                                 <---------DEAR3(1)                              <------ZmHOX2a(1)                                --------->ATERF1(1)             --------->AHL20(2)                                <------NtERF2 <---------ANAC46  <---------AHL20(2)                               <-----------HVH21    <---------ARR14(2)        <---------LBD16                               <---------ATERF1(1)  --------->ARR14(2)   <----------DOF2            -                              --------->DEAR3(1)<------NtERF2 <-----------TBP <-----------RAV1(2)   <      *TSS         <------ZmHOX2a(1)--------->DEAR3(1)   ---------->ID1  <---------DAG2--------->CCA1(2)   agagagagagagagagagagaggaagacttagccgtcgccgagatatgtcggagtatttgtcttatttatatgggctttttcaggagagatttaagaccc  8369100                                                                                             --------                                                                                            <--------                               <---------TOE2(3)                                 --------->AHL20(2)                             ---------->DOF2                                     <---------AHL20(2)  ---------->DOF2      ----------->GT1                       ----------->GT1     <---------AHL20(1) -------->AHL20(2)   <---------ANAC46               <---------ARR14(2)     ----------->GT1  <-------- ---------AHL20(2)   ----------->GT1                --------->ARR14(2)   <---------ANAC46<---------MYB52(1)   atttaaaagcccatttggaagtgatgtgaaaaaaaggttttgccaaatggcccaaatcccatactgtaatacattatgggtaaaaaatttcgttaaggta  8369200     ------->TEIL  <---------ANAC55(2)                                                              <---------YAB1  <---------ANAC46                                                              --------->ARR11(3)  ----------->GT1           ------->GAMYB                                       <---------ARR11(3) <---------TOE2(3)       <-----------GT1     ----------->GT1                   --------->GLK1(1) --->GT1              --------->YAB1       <---------ANAC46                    <---------GLK1(1) -TOE1(3)          --------->YAB1    <-------TEIL         <-----------GT1  --------->YAB1           < -TOE2(3)       --------->YAB1   <---------ICU4      --------->YAB1<----------DOF2--------->TOE2(3) -   tataacgtatatagcctataagcataataaccccataaatacattatgggtaaaatcatatttctctctctttccaataagaaatcttattgcaattggt  8369300                                 --------->MYB52(1)                                        <---------ATHB12                    --------->LBD16             <---------ARR11(3)                   --------->YAB1--                --------->ARR14(2)              --------->ARR11(3)        <---------WRKY38(1)     <--                <---------ARR14(2)             --------->YAB1   <---------AHL20(2)--------->ARR14(2)      --------->MYB52(1)  ---------->DOF2--------->YAB1         <---------YAB1  --------->LBD16 ----- ---------HSFB2a(2) <---------LBD16 --------->LBD16          <----------DOF2  <---------LBD16 <------ -------->HSFB2a(2)<---------LBD16<---------LBD16   <-----------GT1      --------->WRKY18(1)---------   ttctaaaaaaccggttcgaatccagggagaaagaaaaccggaatcaaaatgatatttctctctctttttattgtggtcaaaccggaatcacaaatcataa  8369400     <---------ICU4     --------->YAB1    <---------YAB1  <---------ICU4  --------->YAB1                                                                                 ---- --------->ICU4                          --------->ANAC58                                        <--- ------->YAB1 <---------ANAC55(2)        --------->ANAC58                                        ---- -------AHL20(2)                  <---------YAB1                                                <---- ---->YAB1   <-----------------------TaNAC69(2)                                              <------- ---YAB1 --------->ANAC58      --------->GLK1(2)                                <------ZmHOX2a(1)<--- >YAB1   --------->ANAC58     <---------GLK1(2)  ---------->DOF2    <---------YAB1 --------->MYB52(1)   ataataatcataagaaacgtgaatgggccttagattccgattcaagcccataaaagaaggcccagtttttgttattagattaggacaccggtttgatttc  8369500                                                                          <---------ICU4                                                                         --------->ICU4                                                                         <---------YAB1                                                                     <-------GAMYB                                                                     --------->At5g28300                                                                   <------NtERF2                                                                  ------>NtERF2<---------ANAC58                                                                 --------->DEAR3(1)                                                                 <---------DEAR3(1)                                                                --------->ATERF1(1)                                                                <------NtERF2  <---------ANAC58                                                               <---------ATERF1(1)             --------->LBD16                                   ------>NtERF2   <---------LBD16   ----------->GT1  <-----------GT1                            <-----------HVH21 ----->HSFC1(1)<---------GLK1(2)                              --------->DEAR3(1)       --------->YAB1 ------HSFB2a(2) *TSS                                   --------->ZAT2<---------MYB52(1)            - ----->HSFB2a(2)--------->GLK1(1)            <---------CCA1(2)<---------DEAR3(1)--------->LBD16     - -----LBD16<---------LBD16          ------>MYB83        <---------ZAT2--------->ICU4  <------ZmHOX2a(2) --GLK1(1)--------->MYB52(1)        ------>MYB46(1)     --------->At4g35610    <---------ANAC46     - ------HSFC1(1)--------->ARR14(2)  --------->WOX13(1)   <---------At4g35610   <---------LBD16  <-----   tggaagagaaaaaaccggaatttcacatcgtctctaccaatctctccatctctctctctgctcgccgtcgccgttattattccgggcgatcaaaattaag  8369600                                                                 <---------YAB1                                                              <---------AHL20(2)                                                         <---------AHL20(2)                                                         --------->AHL20(2)                                                      --------->YAB1                               <---------WOX13(1)     -------->HAHB4      <---------GLK1(1)                              <---------ANAC58       ----------->GT1  --------->ALFIN1--------->MYB46(3) -------->ANAC58              <---------ANAC58       --------->ICU4 <---------bZIP60(2)----------->RAV1(1) -------->ANAC46      <---------At4g35610            <---------YAB1 <---------ANAC46--------->ARR14(2) -------->ANAC58      <---------ZAT2      <---------ANAC58   --------->AHL20(2)     <---------ARR14(2) -----ID1             --------->At4g35610 <---------ANAC58  <XXXXXXXXXXXXXXXXXXXXMIR2111A/B  --------   acaagccattttgtaagtttttgcagctacttgagtgatacaatgcttgagagtaatgataaattttatgatgtgggtttctctcagaaccacaaaaatt  8369700                                                                                              <------                                                                                            <--------                                                                                            ---------                              <---------ANAC58                                    --------->HSFB2a(2)                              <---------ANAC58                         --------->TOE2(3)    <--------HAHB4                         --------->At4g35610                     <----------DOF2  <---------HSFB2a(2)                         <---------At4g35610                   <---------ATHB12  <---------LBD16 ---- ->DAG2            <<<<<<<<<TBF1  ----------->HVH21<-----------RAV1(1) --------->TOE1(3)   <---------ATHB12   gacaaaatttgattttgtttcttcttcagataacttgtgaccagtccctgtttatgtgggtttcaatctttaacctcaagtcttctggattgaatcattt  8369800    --------->ANAC58                    <----------DOF2    --------->ANAC58                   <---------DAG2 ---YAB1                            <------ZmHOX2a(1)                                     --------->HSFB2a(2) -ICU4                         <---------ANAC46        <---------MYB52(1)                 <---------HSFB2a(2) >YAB1         <----------DOF2 <---------REM1(1)  <---------ANAC58                    <---------GLK1(2) ----------->AtSPL8         <-----------RAV1(1)   <---------ANAC58          --------->GLK1(2)   ttgtacaagaaccaaggcttttcgatatttctggtgtaggaccttttctcttgcttcgttgtctgagaataactcaagattccagactgattctagtagg  8369900                                                                --------->GLK1(2)                                                    --------->ARR14(3)               --------->ANAC58                     <---------ARR14(3)               --------->ANAC58                     <---------ARR14(2)               --------->ANAC46                     <---------ARR11(3)            <------ZmHOX2a(2)    --------->ANAC58   --------->ARR11(3)       <---------LBD16           --------->ANAC58   <---------GLK1(2) --------->TOE2(3)      --------->YAB1            ----------->ARR10 <---------DAG2--------------->AtSPL8--------->ANAC58          <---------GLK1(2) <---------MYB59       <---------YAB1--------->ANAC58      <-----------GT1   ctaccttactctggatcacggtactatcatagttcaagtaagcattttggtgaagattttgtttcgattctgaagaatattgatgtcccaagggattgtg  8370000  Previous    Next  AGI:  At2g19270.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO69581.1) Range:  from: 8367271    to: 8369006    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g19280.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT1G05670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40767.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 8369517    to: 8373226    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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