Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               --------->REM1(1)                                                                    --------------->AtSPL8                                                                    --------------->AtSPL3                                                                    <---------------AtSPL3                                                                    <---------------AtSPL8            ----------->GT1                                   --------------->AGL15        --------->ARR14(2)                                  -------->P    --------->TOE1(3)    <-------TEIL                                        <-----------GT1 ------->TEIL               -- ---------TOE1(2)                          <---------ARR14(2)----------------->AGL1             ----- --CDC5 <---------ARR14(2)                 --------->ARR14(2)----------->RAV1(2)         <-------TEIL   cctaggtacatatccagtaacattttcttcatcacgatgctcacatatttgcttcattttgctacctgaagaagtaccttcaccatctaagttcatacct  8348800                                                                                                  <--                                                                                              <------                                                                                              <------                                                                                              -------      --------->GLK1(2)                                                 --------->YAB1     <---------   --------->ARR11(3)                                                  ----------->HVH21--------->ARR11(3)   <---------ARR11(3)                                        <------ZmHOX2a(1)          <---------ARR11(3)  --------->YAB1       <------ZmHOX2a(1)                  <-----------RAV1(2)       ---------->DOF2 -------->DOF2    --------->HSFB2a(2)       <---------ARR14(2)--------->ARR14(2)   <---------ATHB12 < ---->AtLEC2      <---------HSFB2a(2)       --------->ARR14(2)<---------ARR14(2) --------->WOX13(1) -   gcaaagataatctctagtttctcgaggaacaaggggggattacaccgatactgcccagcctcaggattcacctatgacaattccaatcaagctcttttta  8348900                                                                                                  ---                                                                                                  <--                                                                                               ------                                                                                               ------                                                                                               ------                                                                                              -------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             --------                                 --------->ANAC58                                            <------- ---------GT1                    --------->ANAC46                                            <------- ---AHL20(2)                     --------->ANAC58          <---------------AGL15             <------- ---YAB1              --------->YAB1                    ------->TEIL                        <------NtERF2 -->AHL20(2)         <---------ATHB12               <---------------AtSPL8                  --------- -DOF2      --------->YAB1      ------->GAMYB       <---------------AtSPL3                  --------- ---------ANAC55(2)  <<<<<<<<<ARR2                  --------------->AtSPL8                 ------>NtERF2 -------->ANAC55(2)--------->WOX13(1)        ----------->GT1                        --------->ATHB12   ttacatattagccttcataaacaatcaaaatcaacacacaaaaaacgttgttaatttgtacctctaaatagttggcccattcttgatcagtggcaccaaa  8349000                                                          <---------ALFIN1 ---->MYC3                                           --------->HSFB2a(1) -----MYC3                                          <---------ARR11(3) >MYB46(1)                                          --------->ARR14(2) >MYB83                                             <---------ARR14(2) --->MYB52(1)                                       --------->ARR11(3) -->MYB55(1)                                        <---------ARR11(1) --MYB111(1)                                        <-----------ARR10 ->AtMYB61                                         <---------CCA1(2) --MYB52(2)                <----------DOF2         <---------ARR14(1)     <---------CCA1(2) ->MYB46(3)            <---------GLK1(1)           ------>MYB83      --------->ATHB12 --MYB111(2)           <---------CCA1(2)           ------>MYB46(1)   <---------ICU4 --MYB46(2) --------->GLK1(1)                    --------->AtMYB61  <---------YAB1 --------->ATHB12 --MYB55(2)<---------GLK1(1)   <---------AtLEC2 --------->ANAC46<---------WOX13(1) <--------ATHB1 >ANAC58--------->ANAC58--------->ARR11(3)    --------->ANAC46 <---------ANAC58   <---------ATHB12 >ANAC58--------->ANAC58<---------ARR11(3)    --------->REM1(1)<---------ANAC58   --------->ICU4   cgtgtttgtcaaggaatcccatttgatatctttgcattgaacaagtctacaccaaatcttccactgcttgatcattgtatcccaatgatttataagctgg  8349100                      <---------ANAC58                      <---------ANAC58                      <---------ANAC46               --------->ANAC58                         <--------P----------->RAV1(1)               --------->ANAC58                      <---------TOE2(3)             <---------ALFIN1                        <---------TOE1(3)           <---------ALFIN1               ======================RAV  --------->ARR11(3)          <---------ZAT18              <---------ARR11(3)         <---------ALFIN1          --------->ZAT18     <---------HSFC1(2)    <-----------RAV1(2) <----------DOF2         --------->DEAR3(1)   --------->HSFC1(2)    ==========================RAV          --------->ZAT18        --------->MYB46(3) ---------->DOF2<-----------RAV1(1)   --------->LBD16----------->HVH21       ------->TEIL<---------CCA1(2)   <---------AHL20(1)<-------TEIL<---------ARR11(3)    <---------ZAT18   tctatggtgaaccgcacacccatttcttgaaaagcttccaatatatgttgcatttcaggttgattccccaacatcttttgctcgacgcataagtccacaa  8349200                                               <-----------GT1                                        <---------ICU4                                       <---------YAB1                                       --------->ICU4                                    --------->TGA2(2)                                  --------->bZIP60(1)                                               <                                  --------->bZIP60(2)                                         -------                                  --------->ANAC58                                          ---------             <---------TOE1(3)    --------->ANAC58                                         --------->DAG2            <-----------RAV1(2)   --------->ANAC46                     ---------->DOF2    ---------->DOF2      <---------ANAC46      <----------DOF2  <----------DOF2   --------->MYB59     ----------->RAV1(1)   atacttcgtcgtgttcaggttcccatgcggctttggacgtcataattctttactatatgcatagttagataaataaagacaacaacaacaaaaaaagtaa  8349300                       --------->WRKY12           <---------ICU4           <--------HAHB4             <---------MYB52(1)                                  <---------MYB46(3)           --------->ATHB51          <-------GAMYB                                        -----------          <---------YAB1             --------->LBD16                                    <---------WOX13(1)          --------->ICU4     <---------MYB52(1)                                        <------------CBF        --------->YAB1 --------->WRKY38(1)                                            --------->ATHB12      --------->ARR11(3)     --------->At5g28300                                  <-----------------AGL3      <---------ARR11(3)<---------WRKY18(1)    <---------ANAC46                 <---------YAB1 <---------TOE2(3)     --------->WRKY45  <---------YAB1                       --------->YAB1        - ------------>CBF      ----------->HVH21--------->AHL20(2)                    <---------ICU4        - -----------GT1---------->DOF2      <---------ANAC46                  --------->DAG2 <---------YAB1 - -->AHL20(2) <---------YAB1 ----------->GT1<------------CBF          ---------->DOF2 <---------AHL20(2) -->GT1<---------YAB1<----------DOF2----------->GT1       --------->ANAC46   <---------ATHB12      <-   attaacaatatcattattaaaggctttgaccggtaattccgttaaaattgtgggaaatatacaaaacaaaataaagcaaatcatgatataattggttaga  8349400 --------->LBD16 >GT1 -------->ANAC58                                                                                  <-- -------->ANAC46<---------ARR11(3)                                 <-------TEIL              <------- -------->ANAC58--------->ARR11(3)                          ------------>CBF             --------->AHL20(2) --------LBD16  <---------GLK1(2)                          <-----------GT1               <---------AHL20(2)   acccggaagatagcgaaagattttgtcattccaaatagttttatacagaaaccaagtctatatacaatatacattcaaatatgtatgggaattttttaca  8349500                    --------->TOE1(3)                  -------->P               <---------MYB52(2)          --------->HSFB2a(2)                                 --------->AHL20(2)        ----------->GT1       ------->TEIL --------->TOE2(3)                         <---------AHL20(2)<---------ANAC58<---- -------ICU4 <<<<<<<ZML2                      <-----------GT1 --------->AHL20(1)<---------ANAC58<---- ----GT1  <---------HSFB2a(2)  ------------>CBF    <---------ICU4         --------->ZAT18    --------   tcatggctgaatctagaactaaccttaagacttatcaattccaaaattttacatcatggctaaattttttggcatttgcactgcttgagatggagaattc  8349600                                                              <----------DOF2                                                            --------------->AGL15                                                            <---------------AGL15                                                           <-----------------AG                                                           <-----------------AGL1                                                           <-----------------AGL2                                                           <-----------------AGL3         <---------WOX13(1)                                                        <---------GLK1(2)               <---------WRKY18(1)                                                        --------->ARR14(2)      <---------WOX13(1)                                                      ----------->ARR10       --------->ATHB12   <---                                                  --------->ATHB12           <---------AHL20(2) <---- -----ANAC58                             <-----------GT1<---------ARR14(2)   <---------YAB1     ----- -----ANAC58                   <---------ZAT18   <---------YAB1     <------ZmHOX2a(1)  --------->WRKY38(1) ->GLK1(1)     <---------YAB1  --------->ZAT18<---------MYB52(1)  <---------TOE2(3)    --------->WRKY12   ttgtgtttttttctgagattataggtgtctaagggccctatttataccggtatgagtggattctcttttaggaaactttttaattggcattgactgattt  8349700  Previous    Next  AGI:  At2g19220.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G11290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69032.1) Range:  from: 8347760    to: 8349243    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version