Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <---------YAB1                                                                          ---       <---------AHL20(2)              <---------TOE2(3)              --------->YAB1             ----     <----------DOF2                  ---------->DOF2              --------->HSFB2a(2)          ----- ------AHL20(2)    --------->ICU4<---------YAB1<-----------GT1     <---------HSFB2a(2)       --------   tttttttcttttattgttgtattgattccaccattttgattaaagtttttatcttgactaaaaacatttctataagaattcaagaggtgttttaaaaata  8300400         --------->PCF2   --------->ARR11(3)   <---------ARR11(3)                           <-----------GT1   <---------ARR14(2)             <---------ANAC58                     <-----------HVH21  <---------CCA1(2)               <---------ANAC58               <---------YAB1 -------->GT1                    <---------------AtSPL8        <---------ICU4 ----->DAG2       --------->AHL20(2) <-------TEIL              --------->YAB1 ----->DOF2 ----------->RAV1(1)  --------------->AtSPL8     --------->YAB1<---------ETT(1) ->YAB1 <---------WRKY18(1)  --------->GLK1(2) <-----------GT1--------->ICU4        <-----------GT1   aagtatatcttgacccacaaataaaaacaagaatttgggtacacattattttccaatttgtataatcatcatatgtccgaccatattaactagtcaagac  8300500                                                                              --------->MYB52(1)                                                                        --------->ANAC46                                                                      --------->ANAC46                                   <------MYB83                --------->AHL20(2)                                   ----------->GT1             <---------AHL20(2)------->GAMYB                                   <------MYB46(1)       --------->ANAC58     ----------->RAV1(1)                                  --------->MYB59   --------->ZAT6    --------->ANAC58                        <---------ANAC58           <---------YAB1     --------->ANAC58                        <---------ANAC46        <---------AHL20(2)  <-----------GT1       -----------                       <---------MYB46(3)    ------->TEIL--------->ANAC46    --------->ANAC46          --------->YAB1<---------ANAC58   <-------TEIL  --------->ANAC58----------->RAV1(1)       --   gttagacttcattcataatacgaattgggtgctagtttggttaaatgcattttatgactacgcattttattcacacaacacaacagaacacaacgtgaaa  8300600                                                                                     <------------CBF                                                                                    <---------AHL20(2)                                                                                    -------->ATHB1                                                                                    --------->ATHB51                                                                                    --------->ATHB12                                                                                    <---------ICU4                                                                                    -------->HAHB4                                                                                   --------->ICU4                                                                                   <---------YAB1                                                                                   <---------ATHB51                                                                                 <--------HAHB4                                                                                <---------YAB1                                                                              --------->YAB1<--------                                                                             <---------ATHB12                                                                         --------->SPL7     <--------                                                                 --------->MYB59--------->ICU4                                                       ---------->DOF2 <-----------HVH21  <----------       <----------ID1                               --------->ANAC58  <---------ANAC58 --------->YAB1 >GT1---------->DOF2       --------->YAB1           --------->ANAC58  <---------ANAC58<---------YAB1 ------->CCA1(2)           --------->AHL20(2)    --------->WRKY18(1) <-------TEIL<---------ICU4    <-   tatacgagaaagacaaatcacaaatctaataatatttgagtttttgacgaggtcaagaaaagtattttaggtccgtcccatcataattattgtaacttgt  8300700                                        <-----------ARR10                                  --------->ANAC58                                  --------->ANAC58                               --------->TOE2(2)                                  --------->ANAC46                               --------->TOE1(2)                                 <---------LBD16                              --------->YAB1         --------->YAB1             --------->MYB52(1)                       ------>MYB46(1)  <---------ARR14(2)                     ----------->HVH21                       -------->P --------->ANAC46<----------DOF2          ------>MYB46(1)  <----------DOF2      ------>MYB83     --------->ARR11(3)                 ------>MYB83 -ANAC58             --------->AtMYB61  <---------ARR11(3)               <---------MYB59 -ANAC58    <---------ATHB12 <---------ATHB12 ------>ZmHOX2a(1)     <---------MYB52(2) -GT1   ------------>CBF ------->GAMYB  --------->ARR14(2)      *TSS--------->MYB46(3) ----------GT1      --------->MYB46(3) <---------CCA1(2)<---------ICU4   --------->AtMYB61     <-----   ttgacttttctccaataaacaaaccaacccaaacatacgacatatctcctctctttgataatcgccattaacaaaccaaacctcacggagtcttctcctt  8300800                                ------>ZmHOX2a(2)                              <---------ARR11(3)                              --------->ARR11(3)                        --------->YAB1               ------>ZmHOX2a(1)                 <---------ALFIN1                     --------->YAB1              --------->ARR14(2)       <---------ANAC58 ---------->DOF2     <---------ICU4      <----------DOF2    <----------DOF2      <---------WRKY18(1) -----DOF2        --------->YAB1============================HOX2a_HOX2a   <---------ANAC58       <---   tttaaaagaagagtctctcttcataatcatatgatctctctctctttccagtttcctctaagcttttctcatggtttcgttcttgaccctcacttccttc  8300900                                      --------->ANAC46                                   --------->ETT(2)                 --------->DEAR3(1)                                   <---------ETT(2)                 ----------->HVH21                                  <------NtERF2 --------->LBD16   ------>NtERF2                                 <---------ATERF1(1)    <-----------GT1                                 ------>NtERF2  <---------ATERF1(1)--------->ATERF1(1)             --                                --------->DEAR3(1)     <---------ZAT14                            ---                                --------->RAP2.3(2)    --------->ZAT14                      ---------                                --------->RAP2.3(3)   <----------DOF2------>NtERF2          ---------                               --------->ATERF1(1) ------>NtERF2  --------->LBD16           ---------                               --------->RAP2.3(1)--------->DEAR3(1)<---------ETT(2)      ------>NtERF2    <---------At4g35610       --------->LBD16   ------>NtERF2     <---------ATERF1(1)    --------->DEAR3(1)    --------->At4g35610       ------>NtERF2    <---------DEAR3(1)<---------DEAR3(1)      ----------->HVH21 -------DOF2            <----------DOF2       <---------LBD16   <---------LBD16        ------>ZmHOX2a(1)   tttttcatctgcttcttcatccatggctcttccgccgtcgacacaatctccggcgactttactctctccggcgaccagactattgtctcctccgacggaa  8301000 --------->ANAC58 --------->ANAC58 --------->ANAC46         <-------TEIL --------->ANAC55(2)     --------->ARR14(2) ------->MYB52(1)        <---------ARR14(2)                 --------->ANAC58 ------>TOE1(2)          <---------ARR11(3)                 --------->ANAC46 >ANAC58                <---------GLK1(2)                   --------->ANAC58 >ANAC46          <-----------GT1                     <---------ANAC46                        <------ >ANAC58      <----------DOF2<<<<<<<<<TBF1    <---------TOE2(2)                        <--------P   cttacgaaatgggtttctttaaaccaggttcttcttcaaacttctacataggtatgtggtataagcaactctctcaaaccatactatgggtagccaatcg  8301100                                                                                             <-------                                                                                            <--------                                                   --------->TOE2(3)      --------->MYB52(1)---------                                              ------->GAMYB              <-----------GT1 <------MYB46(1)                                             --------->ANAC58           --------->ICU4   <------MYB83                                             --------->ANAC58         >>>>>>>>>GT-2     <---------AtMYB61                                           --------->MYB52(1)       --------->At5g28300 --------->MYB59         --------->ARR14(2)          <---------ARR11(3)            ----------->GT1    <---------MYB52(1) ---------->DOF2                     --------->ARR11(3)        ----------->HVH21    --------->LBD16 ---ATHB12  <---------ETT(1)        <---------GLK1(2)      ------>ZmHOX2a(1)      <---------LBD16   agacaaagcagtttccgacaaaaactcatcagttttcaaaatctccaacggaaacttaatcctactcgacggtaattaccagactccggtttggtccacc  8301200                                                                                   <---------ANAC58                                                                                   <---------ANAC58                                                                            <------NtERF2                                                                            --------->At4g35610                                                                           <---------RAP2.3(1)                                                                           <---------ERF1                                                                           <---------ATERF1(1)                                                                           <---------DEAR3(2)                                                                           <---------RRTF1(1)                                                                           ------>NtERF2                                                                          <---------RAP2.3(2)                                                                          --------->ATERF1(2)                                                                          <---------RAP2.3(3)  ------                                                                          <---------ATERF1(2) <------                                                    <------NtERF2         <---------DEAR3(1)  <------                                                   ------>NtERF2         --------->ATERF1(1) --------                                          <---------AtLEC2              <---------ATERF1(1)  <-------     --------->ANAC46                --------->ARR14(2)                --------->DEAR3(1)  <---------MYB52(2) --ALFIN1                     ---------->DOF2    --------->RAP2.6(3)  --------->DEAR3(2)  --------->ZAT2 -WRKY38(1)    ------>ZmHOX2a(1)     <---------ARR14(2)             <---------ARR14(2)    --------->At4g35610 >ETT(2)<---------ALFIN1<---------At4g35610     <---------ATERF1(1) --------->ARR14(2)    <---------At4g35610   ggtctcaactccacttcctctgtttctgctcttgaagcggttttgcaagacgacggcaatcttgttctcagaaccggcggctctagcttatcagctaacg  8301300  Previous    Next  AGI:  At2g19130.1    Description:  S-locus lectin protein kinase family protein. similar to ARK3 (Arabidopsis Receptor Kinase 3), kinase [Arabidopsis thaliana] (TAIR:AT4G21380.1); similar to hypothetical protein OsI_015328 [Oryza sativa (indica cultivar-group)] (GB:EAY94095.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41272.1); similar to hypothetical protein OsJ_014212 [Oryza sativa (japonica cultivar-group)] (GB:EAZ30729.1); contains InterPro domain N/apple PAN (InterPro:IPR003014); contains InterPro domain Apple-like (InterPro:IPR003609); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (Inte Range:  from: 8300764    to: 8303357    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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