Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   --------->At5g28300                                                                                ----------->GT1                                                                             <---------ANAC55(2)                                                                             <---------ANAC55(1)                                        --------->LBD16                      --------->ANAC55(2)                                        ----------->GT1                      <---------ANAC58                                     --------->MYB52(1)                      <---------ANAC58                                    <---------ARR14(2)                       <---------ANAC46                                    --------->ARR14(2)                     <-----------GT1                      ------->TEIL <------ZmHOX2a(1)             --------->TOE2(2)    <---------AHL20(2)               <------ZmHOX2a(1)--------->CCA1(2)                --------->TOE1(2)    --------->AHL20(2)      --------->AHL20(2)       <---------ARR14(2)--------->AHL20(2)      --------->CCA1(2)        <--   --------->YAB1    <---------GLK1(2)<---------LBD16   ---------->DOF2 <---------ARR11(3)      -----   acgtttcataaaatataggaactgaatcttgaagataggaaccggaaacaaataactaaaaagatagcctacgagatttacgtggtaaaaaaataactta  8285600                                                                                     <---------DAG2                                                                               --------->SPL7                                                                            <------MYB83           --------->TOE1(3)           <---------TOE2(3)                    <------MYB46(1) ---------GT1     ---------->DOF2    ---------->DOF2                       --------------->AtSPL8 ----->DOF2--------->TOE2(3) ----------->GT1                           --------->ATHB12    <---------   aaaccccataaaaccttaatcaaagaaaaaatggtttaataaaggtttcaaaaatttagtaatggttctaaaatcatttggtaccccccttattaaactt  8285700                                                                                 --------->ATHB51                                                                                 <--------ATHB1                                       --------->YAB1                            --------->AHL20(2)                                       --------->AHL20(2)                        <---------ICU4                -------->P             <---------AHL20(2)                        <---------AHL20(2)                ------>MYB46(1)        <---------AHL20(1)                       --------->ICU4     <---------DAG2                    <--------ATHB1                         --------->YAB1     --------->TOE2(3)                 <---------ICU4                        <---------AHL20(2)     --------->TOE1(3)              --------->YAB1                          --------->AHL20(2)  ------->GAMYB ------>MYB83       <---------AHL20(2)          --------->HSFB2a(2) <---------MYB111(2)      ---------->ID1 --------->ICU4        <---------HSFB2a(2)                  < --------->MYB46(3)  <---------GLK1(2)--------->ICU4     <--------P      --------->ATHB12  <---------DAG2 --GT1        <---------MYB111(1) --------->AHL20(2)<-----------RAV1(1) <---------YAB1     <---------   tcaacaaccttatacacctactagatttgtggtatttttaataattttgaatttttgtggtagttttggaaaacatgatttaataatttgaagcttttcg  8285800                                                          <---------YAB1                                                       <---------ARR11(3)                                          <---------AHL20(2)                                          --------->AHL20(1)                                  -------                              <---------YAB1           --------->GLK1(2)                     <-------                            <--------HAHB4<---------AHL20(1)                                ------>MYB83                            <---------ICU4--------->ARR11(3)                             --------->MYB46(3)                            --------->YAB1<---------ARR11(3)              --------->TOE2(3)--------->WOX13(1)              <---------AHL20(2)          --------->AHL20(2)    --------->ICU4           ------------             --------->AHL20(2)<---------ICU4         --------->RVE1(1)  ----------->GT1-------->P          --------->ICU4   <------ZmHOX2a(2)   --------->YAB1 <---------ICU4           --------->MYB52(1) -----------GT1            <---------ATHB12<---------AHL20(2)<---------YAB1          <---------MYB52(2) -DOF2  --------->YAB1 <------ZmHOX2a(2) --------->AHL20(2)  --------->ICU4  ---------->DOF2------>MYB46(1)   aattactctataatttttaatagagatcgatcattatccctaaatatatttataaaaaatctgataattactaaaatgttaaagaaaactaaccaatcat  8285900                                                                                                    <                                                                                                    <                                                                                                    -                                     --------->REM1(1)                                              <                                --------->ANAC58                                                    <                            ----------->TBP                                                         <                    <---------At4g35610                                                            --    <---------MYB52(2)   <---------------AGL15                                                     --   --------->At4g35610   --------------->AGL15                             --------->ZAT14      -----   <---------At4g35610  ----------------->AGL1<---------CCA1(2)        <---------ALFIN1        ------  ------->TEIL      --------->At4g35610  ------->GAMYB                 --------->ZAT6    <---------At4g35610 -->YAB1        <---------ANAC58--------->ANAC46 <---------ANAC58   ------>ZmHOX2a(1)<----------DOF2- --ATHB12       <---------ANAC58--------->ANAC58 <---------ANAC58   ================================= >CBF           --------->ANAC55(2)  --------->MYB46(3)        *TSS<---------MYB59  --------->TOE2(3)   cttgcatctaacattcttacttatctgcctatataagcaacaactcccatttcttgacttctctatgttcctaacacttctctcaacctttatctgatcg  8286000  ------>MYB46(1)  ------>MYB83 ---------MYB55(2) ---------MYB111(1) -------->MYB46(3) ---------MYB111(2) ---------MYB52(2) ---------MYB46(2) ------->ANAC58 ------->ANAC58 ---->ZAT18                                                <---------MYB52(1)                      <- >ZmHOX2a(2)<-----------GT1                               --------->LBD16                        ---- -------->AtMYB61                                       <---------LBD16                         <---- =HOX2a_HOX2a                 <----------DOF2   ------>ZmHOX2a(1)   ---------->ID1         --------->GLK1(1)   caccaaaccagttttttcgcatcggcttcttccttttgctactagctctcctctcttctccggtatttttgtctctcttcttaattcacacagatttcat  8286100        <---------ARR11(3)        --------->ARR11(3)                                        <----------ID1 --------->ANAC55(2)   --------->DOF5.7(2)                        --------->ANAC58 <---------ANAC55(2) --------->ANAC58                             --------->ANAC58       <---------ICU4 --------YAB1        --------->ANAC58                      <---------ANAC58 <-----------GT1  <------- ----->YAB1   --------->YAB1                               <---------ANAC58<-----------GT1   -------- -----YAB1------>ZmHOX2a(2)--------->ZAT6    <---------ANAC46     --------->ANAC46     <---------ARR11(3)   gataagtgatgatctataacaagacgctaactcttctcttgcatttctcgtgttttcattttcttgttacgccaaatttatcccttcaaaatcatttttt  8286200                            <---------At4g35610                         ---------->DOF2                    --------->ANAC58         --------->GLK1(2)  --------->At4g35610             --------->ANAC58         <----------DOF2 <---------ANAC58    <---------ANAC55(2)                --------->ANAC58      <---------ARR11(3) <---------ANAC46   <---------ICU4                      --------->ANAC46      <---------GLK1(2) <---------ANAC58  --------->ICU4                       --------->ANAC58      --------->ARR11(3) --AHL20(2)      --------->YAB1                --------->ANAC46             ----------->ARR10   ----- ->AHL20(2)     --------->AHL20(2)   ---------->ID1 --------->ZAT6     ----------->GT1    <------ZmHOX2a(1)   tatgcgtatagaatccaaataataagtaaaagctgattcgtcttcttccacttaacacaagtaagcaatgagagggtgaagatttttctttaggaaaaaa  8286300                          ------>ZmHOX2a(2)                    <---------ANAC58                    <---------ANAC46                    <---------ANAC58          <---------RVE1(1)          <---------CCA1(1)           <---------AHL20(2)         --------->ARR11(3)         <---------YAB1         <---------ARR11(3)        <---------AHL20(1)         <---------ARR14(2)    <---------ICU4 ---------->DOF2              --------->ANAC46       ----------->ARR10<---------ARR11(3)--------->TOE2(3)        --------->AHL20(2) ----->DOF2   <---------AHL20(2)--------->TOE2(3)               --------->YAB1         ---------->DOF2   aagagagtgaagatattttttggcttgatctcaacattattttttcttaaaagtaaacattttcaataagaaaatacaagacccataccgaaagtttctt  8286400                                      <---------ICU4                                      --------->YAB1                                      -------->HAHB4                                     --------->ICU4           <---------ANAC58                                     <---------YAB1           <---------ANAC58 --------->LBD16                                   --------->YAB1          <----------DOF2    --------->ANAC58                                   <---------ICU4         <---------ANAC58    --------->ANAC46                                  --------->ICU4          <---------ANAC58    --------->ANAC58                                --------->YAB1          <-----------GT1      <---------LBD16             <---------TOE2(3) <---------YAB1    --------->DAG2             ------>ZmHOX2a(1)           ---------->DOF2   --------->YAB1     ---------->DOF2         <-----------GT1     ---------   cttaaaaaaaaaaaaaaggttttgaactgtttcatgataatgataactaaaaaagtttttgctttcttgttttttttcctccgcaaaacagtcttaaagt  8286500  Previous    Next  AGI:  At2g19110.1    Description:  HMA4 (Heavy metal ATPase 4); cadmium-transporting ATPase. Identical to Putative cadmium/zinc-transporting ATPase 2 (HMA4) [Arabidopsis Thaliana] (GB:O64474); similar to HMA3 (Heavy metal ATPase 3), ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism [Arabidopsis thaliana] (TAIR:AT4G30120.1); similar to HMA2 (Heavy metal ATPase 2), cadmium-transporting ATPase [Arabidopsis thaliana] (TAIR:AT4G30110.1); similar to P1B-type ATPase 4 [Arabidopsis halleri] (GB:ABB29495.1); similar to P1B-type ATPase 4 [Arabidopsis halleri subsp. gemmifera] (GB:AAY29151.1); similar to putative heavy metal transporting P-type ATPase [Thlaspi Range:  from: 8285963    to: 8293527    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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