Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        ------>ZmHOX2a(2)                                                     <------ZmHOX2a(2)                                                     <---------GLK1(1)                                                     --------->GLK1(1)                                                    <---------ARR11(3)                                                    <---------ARR14(3)                                                    <---------ARR14(2)                                                    --------->ARR14(2)                                                    --------->ARR11(3)                                                   --------->GLK1(1)                                                   <---------GLK1(1)                            <----                                                 <------ZmHOX2a(1)                              <----                  ----------->GT1             <-----------RAV1(2)                               <---- <---------MYB46(3)                           <---------LBD16                                   ----- ---GT1          --------->ALFIN1 --------->ZAT6--------->LBD16                --------------->AGL15   tattggttactactactaggtggagaaaatgtctcaactctaaacgtttcaggagatctctgttcgactctaaccggtctacttctattagccatcaaat  8274600                                  <--------HAHB4                                  <---------ICU4                           --------->TOE2(3)                         -------->P                                                           <------                         ------>MYB83                                                         <------                         ------>MYB46(1)                                         ====================                       <---------MYB59        <---------ARR14(2)                 <----------DOF2    <----------DOF2   <---------ANAC58       <------ZmHOX2a(1)              <---------At5g28300 -----AHL20(2)        <---------ANAC58 <---------LBD16                    ----------->HVH21   ------- -----ATHB51     ===================================HOX2a_HOX2a         ------->TEIL       <---------At4g35610 -----ATHB12     ------>ZmHOX2a(2)--------->YAB1                   --------->At4g35610  <---------LBD16 ---->AHL20(2) --------->ARR11(3)<---------ATHB12                  <---------At4g35610 --------------   aattcgctttcacattcgatcttggcctaccttgaatcattttcggaggaatcgaagaaggcgaaatggagatgaactcaccgctattactacggctgct  8274700    <---------TGA1a    <---------O2    --------->TGA1a    --------->O2  ------>NtERF2 --------->DEAR3(1) ---At4g35610                   ----------->HVH21 ---ZAT2  <-----------RAV1(1)   ----------->TGA1 =============bZIP_DOF    <---------LBD16                     --------->MYB46(3)              ------- -->At4g35610           <---------WRKY18(1)                <------ZmHOX2a(1)                 -------- ------->WRI1          ----------->HVH21      ----------->HVH21        <-----------RAV1(1)<------ZmHOX2a(1)   tcgacgacgtctctgtggcattctcttgaccggagtgacgaatgagtcttgacagagagtaggaacaaactcattgttgttgtctccttggaggataaag  8274800                                                     --------->ANAC58                               =                                                     --------->ANAC58                               =                                      --------->ANAC46                                              -                                      --------->ANAC58                         <---------ANAC58   <-- -->DAG2         <----------DOF2      --------->ANAC58     --------->TOE2(3)   <---------ANAC58   <-- -->DOF2 --------->At4g35610----------->GT1  ----------->HVH21                 <---------ANAC46 <----   tcatggagagcatcagagacttttctaagagagtgaatataagcaatgtgaccagaagcaaacttagttctatgttcaatagcttgtttgatgaaacgtt  8274900             ------>ZmHOX2a(2)            --------->CCA1(2)            <------ZmHOX2a(2)           <---------ARR14(2)           --------->ARR14(2)           <---------ARR11(3)           --------->ARR11(3)           <---------AGP1                                                                          --           <-----------ARR10                                                                       --           --------->AGP1                                                                     -------    <----------DOF2                                                                           <------ ==================HOX2a_HOX2a                                                         --------->ARR14(2) ===================HOX2a_HOX2a                   --------->HSFB2a(1)                  <---------ARR14(2) ----->ZmHOX2a(1)                                 <---------HSFB2a(1)            --------->At4g35610 -------ANAC58                                   <---------KAN4(2)               <---------At4g35610 -------ANAC58                               --------->YAB1              <----------DOF2   --------->LBD16 -----ARR14(2)                  --------->At4g35610      <---------CCA1(2)    ------>ZmHOX2a(1)    --   tcctgtctttacagatctgaactgcttcttcatcatctaacttggaatgagaacatcccatttctctctactcttctttcctaagctcaaatccagagct  8275000                                                                                                    -            ---------->DOF2                                                                         <      --------->YAB1                                                                                < ------->ANAC58                                                   <---------ZAT14                   - ------->ANAC46                                         <---------ICU4    <----------DOF2          -- -->At4g35610                                           <-----------GT1--------->ANAC58        ------ ---At4g35610                                        --------->YAB1    --------->ANAC58   ----------- ------->ANAC58          --------->MYB52(1)  ---------->DOF2      --------->ZAT14     ---------->DOF2   caagacactcatacaaaagctatgaaacaactgagaacagaacaaaacaaagacataataactatgtctgaactcgcattaactgagaaaaagacaataa  8275100                <-----------GT1     <----------DOF2  --------->GLK1(2) --------->ARR11(3) <---------ARR14(2)                                                    <---------------AGL15 --------->ARR14(2)                                                    --------------->AGL15 <---------ARR11(3)                                                   <-----------------AGL2 <---------GLK1(2)             <----------DOF2                <---------ANAC46 -------->HSFC1(2)      ---------->DOF2                       <---------ANAC58 ---------HSFB2a(1) --------->ANAC46                          <---------ANAC58 ---------HSFC1(2)  --------->ANAC58     ---------->DOF2    <---------YAB1 -------->HSFB2a(1) --------->ANAC58   ------>ZmHOX2a(1)<---------ARR11(3) --------->ARR10--------->CCA1(2)     --------->TOE2(3) --------->ARR11(3)            <-------------- --->YAB1<---------ANAC58   --------->ARR11(3)          <---------GLK1(2)            <------------CBF ->CBF   <---------ANAC58   <---------ARR11(3)         <---------RVE1(1)   ---------->DOF2          -   gaagattctttgcttaatatacaagacaaagctctttagtccttaaaacccttgaagagattttgcttgttttctattaaagggtgagattgtactcaga  8275200                                              ----------->GT1                                              <---------ANAC46                              <---------ARR11(3)                        ----------->GT1  <------MYB83                         --------->ANAC58            --------->At4g35610          <------MYB46(1)                      --------->ANAC58            <---------At4g35610      --------->ARR14(2)           ----------->GT1      --------->GLK1(1) <---------ANAC46<---------AtMYB61       ---------->DOF2 -AtSPL8  <-----------RAV1(2) --------->ARR11(3)      ----------->GT1---------->DOF2 ---------->DOF2 -------->MYB52(1)    ----------->GT1<---------ARR14(2)    ---------->DOF2  ---------->DOF2 ---------   aataacagaaacccagatgagaaatggtgtaaaatcttggatttggtgttgtgaaaatgtcaaaaggaaagtaaagagcaaagccagaaaagaagttatt  8275300                                           -------->HAHB4                                           <---------ICU4                                           --------->YAB1                          <-------TEIL                                          --------->ICU4                          --------->CCA1(2)                                          <---------ATHB51                       --------->ARR14(2)                                        ------>MYB83                             <---------ARR14(2)                                        ------>MYB46(1)                       <---------ANAC46                             ----------->GT1                               --------->ALFIN1                         >>>>>>>>>TBF1<---------MYB59                    <---------ANAC58              ------------------------>ANAC81       ---------->DOF2      <---------ANAC46 ---------->DOF2  ---------->DOF2     --------->TOE2(3)  ---------->DOF2 <---------ANAC58 >ARR11(3)    <----------ID1>>>>>>>>>TBF1 <---------ATHB12            <------ZmHOX2a(1)   gaagaaagagagagagaagacaaagaagaagaagaaaaaacctaataatgagtcaaaagaaaagagactggaggagcgtgagggatacacagtagagaga  8275400                                       --------->ARR14(2)                                 <-----------RAV1(1)                               <---------At5g28300                              <-----------GT1                           <---------ICU4                                               --------->YAB1                          --------->ICU4                                               <---------ATHB12                       --------->WRKY18(1)                                            --------->ANAC58                      --------->At5g28300       <------ZmHOX2a(1)                     --------->ANAC58                     ----------->GT1   <---------GLK1(2)                             --------->WOX13(1)     ========================MYC_MYB   <---------ARR14(2)                         --------->ANAC46     <---------O2 --------->MYB52(1)<---------ANAC46           ---------->DOF2    --------->ANAC58     <---------TGA1a ------->GAMYB  --------->ETT(1)       ---------->DOF2        --------->ANAC58   gagagagacgttggagaaaacaacggtcaaaattactgtcggattttgaaggagagagaatgaaagaaagaagtcaagactcactcgcaatcaagaagtt  8275500  Previous    Next  AGI:  At2g19090.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G30130.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72045.1); contains InterPro domain Protein of unknown function DUF632 (InterPro:IPR006867); contains InterPro domain Protein of unknown function DUF630 (InterPro:IPR006868) Range:  from: 8272260    to: 8274961    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version