Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <---------------AGL15                                                           --------------->AGL15                                                          ----------------->AGL2                                                          <-----------------AG                                                          <-----------------AGL1  <---------TOE2(3)                                       <-----------------AGL2 -----RVE1(1)             <------ZmHOX2a(1)               ----------------->AGL3 -----CCA1(1)           <---------TOE2(3)          <---------YAB1 ----ARR11(3)     --------->AHL20(2)             <---------ICU4 --->ARR11(3)     <---------AHL20(2)             --------->YAB1 >AGL15          <---------WOX13(1)             <---------ATHB12                        ---------->DOF2 -AGL15        --------->ATHB12                 --------->ICU4                        <---------YAB1 ->AGL3       <---------YAB1                  --------->WOX13(1)                   --------->AHL20(1) --AGL3       --------->ICU4        <---------TOE2(3)     <-----------------AGL3   <---------AHL20(1)   atttaagaaaaacgttatgattaattaaggagtatttttagattaatgcaatcatgactatctatatttggaaaacaatacaaaaaatattaaagagaaa  8252900                                                                       <-------TEIL                 --------->ANAC58                                     --------->CCA1(2)                 --------->ANAC58                                     --------->ARR14(1)                 <----------ID1                                      <---------ARR14(2)                 --------->ANAC46                                    --------->ARR14(2)             <---------YAB1                                          --------->ARR11(1)     --------->YAB1       --------->CCA1(2) <----------DOF2        ----------->ARR10    <---------YAB1   ---------->DOF2  <------ZmHOX2a(2)    <---------AHL20(2)     <-----------GT1  --------->YAB1------->TEIL         --------->ARR11(3)   --------->AHL20(2)      <---------AHL20(2)-   cctattatcataactatgaacgccaaagttatgggaagagatcaagcttttttttaagcattaaatgtttagatacgttgttatttacatttggactgaa  8253000                                            <------------CBF                                          <---------WRKY12                                          <---------WRKY38(1)                                         <<<<<<<<<<WRKY43                                         <<<<<<<<<<WRKY26                                       <------MYB46(1)                                       ----------->GT1                                        -------                               --------->TOE2(3)                                           <---------ANAC46                              ----------->GT1                                            <---------LBD16                              <---------bZIP60(1)                                       <-----------RAV1(1)                            --------->MYB52(1)                                       <---------YAB1                            <---------DOF5.7(2)                                     <---------AHL20(2)                        <---------TOE1(3)------------>CBF                       <---------CCA1(1)             --------->At4g35610       <------MYB83                             <---------RVE1(1)  --             <---------At4g35610      --------->MYB59         <-----------TBP----------->GT1  <------NtERF2   <-----------GT1      <---------TOE2(3)<<<<<<<<<<WRKY38    <---------AHL20(2)--------->ARR11(3)  -- ---------->GT1   --------->ICU4------------>CBF            --------->AHL20(2) <---------ARR11(3) <--   atttgtaactaatttagctaaatattaaggtaacgtcaatttggtcaattggaaaacaaaaattttatatagggcaagagggatatttttatggggggca  8253100                                                                                     <-------PIF5                                                                                     ------->PIF5                                                                                 ------>NtERF2                                                                                --------->DEAR3(1)                                                                               ------>ZmHOX2a(2)                                                                              --------->ARR14(1)                                                                              --------->CCA1(2)                                                                              <------ZmHOX2a(2)                                                                             <---------ARR11(3)                                                                             <---------ARR14(2)           ------>ZmHOX2a(1)                                                 --------->AGP1          <---------ANAC58                                                   --------->ARR14(2)    <---------AHL20(2)                                   --------->ANAC46  ----------->ARR10    --------->AHL20(2)                   <---------TOE1(3)                 <-------TEIL   --------->AHL20(2)                    <---------TOE2(3)             <---------TOE2(3) ----->CBF<---------ANAC58  <---------GLK1(1)      <-----------ARR10   <---------TOE1(3) ------->YAB1              <---------ARR11(3)  <------NtERF2<---------ALFIN1 --------->ARR11(3) ------->AHL20(2)          --------->ARR11(3)--------->ALFIN1  --------->YAB1--------->ARR11(1) ----- -------ATHB12--------->REM1(1)         --------->MYB52(1)<---------ALFIN1<--------P----------->RAV1(2)   atgaaattaattccttacaactcttagaagatttcagaaaattaagggtggcaactctccccccatcttaactaaggtagatccgcccctgcttctaacc  8253200            ---------->DOF2                                                   <---------ARR11(3)           <---------AHL20(2)              ------->GAMYB                      --------->ARR11(3)         ----------->TBP                  --------->MYB46(3)  --------------->AtSPL8       <-----------TBP               <-----------GT1          --------------->AtSPL3 <------------CBF         <-----------GT1 <---------MYB52(2)  <---------------AtSPL8 ---->TOE2(3)--------->DAG2       <---------ICU4       ---------->DOF2   ------------>CBF ---------->DOF2   tctaattgtatatataaagtagcccatttttcttcatttttacaacaaacaaaaacaaaaagaagaagtactatcaacaatatctctataaacaaagaaa  8253300                                                 <---------SPL7                                              <---------LBD16                                            <---------WOX13(1)                                          <---------MYB46(3)                                          --------->ATHB12                                        --------->At5g28300                                      <---------DEAR3(1)                                     --------->LBD16                                     ------>NtERF2                                     <------NtERF2                      <---------HSFC1(2)                                     <---------LBD16                   --------->ANAC58<---------ANAC46                                    --------->DEAR3(1)                 --------->ANAC58<---------ANAC58                                   <---------LBD16       <---------ZAT14--------->HSFB2a(1)                      <---------ANAC58-------------->OsCBT        <------NtERF2        <---------ANAC58                      <---------ANAC58<------NtERF2      --------->ZAT14--------->HSFC1(2)                <---------YAB1    <---------RAP2.3(1)   --------->ALFIN1<---------HSFB2a(1)   tatgaaggcattggtgatatgtttgctagtgattttcgccgcggtgattgcggtaccagtggagagtcgtcggaagcatctagactatggtgtgattacc  8253400                                                                                           --------->At4g35610                                                 ==========================================MYC_MYB                                                 ------->GAMYB                             <---------At4g35610                                              --------->MYB52(1)                          -----------                                       --------->LBD16                                  <------NtERF2                                      --------->ANAC46                           <---------ANAC58                                      --------->HSFB2a(2)                        <---------O2                                      --------->LBD16                            <---------TGA1a           ------>ZmHOX2a(1)         <---------HSFB2a(2)                         --------->TGA1a          <---------MYB59            --------->HSFB2a(2)             --------->MYB52(1) --------->At4g35610   <---------At4g35610   <------ZmHOX2a(1)    ----------->RAV1(1) <---------At4g35610   <---------At4g35610 <---------ZAT18       --------->LBD16<---------HSFB2a(2)        ------>ZmHOX2a(1) --------->ALFIN1 --------->ZAT14      <-----------RAV1(2) ------>NtERF2    ------>ZmHOX2a(1)     --------->O2 --------->ZAT18    ------>ZmHOX2a(1)<---------LBD16   --------->GLK1(2)         <---------ANAC58 <---------ZAT14 ------>ZmHOX2a(1) ------>ZmHOX2a(1)   <---------ARR14(2)        <---------bZIP60(2)   aagtgcgctggtcctaatcctcctccaggatgctatcctcccggagcccaacagaagaatcctactcctgctaacgagtatagacgtggctgcagcaaaa  8253500                                                                            ------->TEIL                                                                            <---------ARR14(2)                                                                            --------->ARR14(2)                                                                         <---------ANAC55(2)                                                                        <-------TEIL                                                                        --------->SPL7                                                                        ------->TEIL                                                                       <---------SPL1(1)                                                                       --------->SPL1(1)                                    <---------YAB1                    <---------SPL7                                  --------->YAB1                     <---------ANAC46                                 <-------TEIL                       <---------------AtSPL3                              <---------ANAC46                      --------------->AtSPL8                              <---------ANAC58                      --------------->AtSPL3                              <---------ANAC58           <---------ARR11(1) ---------->TaMYB80  <----                             <-----------------------TaNAC69(2)  --------->At4g35610          <------                           ----------->HVH21    <---------GLK1(2)--------->ZAT2               -------                         <---------O2    --------->AHL20(2)      <---------At4g35610      <-------TEIL  <---------DEAR3(1)     --------->O2<---------ICU4     <---------CCA1(2)<---------ANAC46--------->AtLEC2 >RAV1(1)            --------->DEAR3(2)  <---------AHL20(2)      <---------GLK1(1)<----------DOF2   <   ttactcggtgcaagcgcgattgaaccgaagtgacgttcatcatttaaactgattcttcatatctatgagctccgtacgtatatgctttaacatgcatata  8253600                ---------->TaMYB80                                      --------->ATHB12          <--                --------->ARR14(2)                                     <---------YAB1  --------->GLK1(1)                <---------ARR14(2)                                     <------ZmHOX2a(2)         ----         --------->CCA1(2)                                            <---------ARR11(3)       <-----        <---------ARR14(2)                                           <---------At4g35610       ------     --------->YAB1                                         <---------KAN4(1)          --------->CCA1(2) ---TEIL--------->ARR14(2)                                  --------->KAN4(1)         --------->ARR11(3) ---ARR14(2) <---------ANAC58                       <---------AHL20(2)--------->ARR11(3)      ------- -->ARR14(2) <---------ANAC58                 ----------->GT1     ------>ZmHOX2a(1)   <---------ARR11(3) -------TEIL <---------ANAC46 <---------AHL20(2)   <---------YAB1--------->TOE2(3)---------->DOF2<---   catacactcatatatgcgtatatgcaaggtgttttatttgtttcaaattagttattaatggattaatcctcagatcattgtatcaaaagatatcaaatat  8253700                                  <---------AHL20(2)                                  --------->YAB1                                  --------->AHL20(2)                                 <---------YAB1                               -------->HAHB4                               <--------ATHB1                               --------->YAB1                               <--------HAHB4                               <---------ICU4                               --------->ATHB51                              --------->AHL20(2)                              <---------YAB1                              <---------ATHB51                              --------->ICU4                            --------->YAB1                           <---------YAB1                          --------->AHL20(2)                          --------->AHL20(1)                          <---------AHL20(2)                          <---------AHL20(1)                         --------->YAB1                        <---------YAB1                      --------->YAB1                      -------->ATHB1                      <---------ICU4                     --------->ICU4                     <---------AHL20(2)                     <---------YAB1                     --------->AHL20(1)   <---------YAB1    --------->AHL20(2) -------AHL20(2)  --------->AHL20(2) ----->AHL20(1)   <---------AHL20(2) ----AHL20(1)    --------->AHL20(1)                                         <-----------GT1 --->AHL20(1)    <---------AHL20(2)                 ------>ZmHOX2a(1)  <---------AHL20(2)          -- -->AHL20(2)     --------->AHL20(2)                --------->TOE2(3)  <---------YAB1          ------- ------AHL20(1)  <---------AHL20(1)         <-----------GT1     <---------AHL20(2)<----------DOF2<---   atattttgatattagaaaataaaattattataataattatatagtatcactctccttaatgcatattcaatttttatttatcggctttgattcgatttgt  8253800  Previous    Next  AGI:  At2g19020.1    Description:  RALFL10 (RALF-LIKE 10). similar to RALFL11 (RALF-LIKE 11) [Arabidopsis thaliana] (TAIR:AT2G19030.1); contains InterPro domain Rapid ALkalinization Factor (InterPro:IPR008801) Range:  from: 8253302    to: 8253523    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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