Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  ------>NtERF2                                                             --------->At4g35610                                                             <---------At4g35610                                                            --------->MYB52(2)                                                       ------>NtERF2                    <---------AtLEC2               ----------->HVH21        --------->GLK1(2)                          --------->ANAC46<----------DOF2     <---------TOE2(3)                           --------->At4g35610  <---------DOF5.7(2) ->ANAC58       <---------------AGL15--------->At5g28300   --------->SPL7 <---------LBD16 ->ANAC58       <----------DOF2   <---------LBD16<---------At4g35610--------->DOF5.7(2) <----------DOF2   agagattaagaatccatactttacatggccaattctcgcggtagaaatggcagacgacgcgttcgctggctttaacgacggagaagaagtctttctcaga  8246700           <---------ARR14(2)           --------->ARR14(2)   ------>ZmHOX2a(2)                                                                               <-  <---------GLK1(1)                                                                                <- ------->TEIL <-----------GT1                                                                      -- --------->ARR11(3)                                 ------>NtERF2        <-----------GT1           -- <---------ARR11(3)                         <<<<<<<<<TBF1             <----------DOF2           ----- <---------AGP1<---------At5g28300  <---------TOE1(2)          --------->ATHB12                 <----   atggatctcagagtattcaccatgtccaagactaatccaacgtttcttcttctctgccattttcttcatttgctttaaccttctctctctcaaaacctct  8246800         --------->WRKY18(1)                                                               --------->At4g35610        <-----------HVH21                                                                 --------->GLK1(2)      ================================HOX2a_HOX2a                                         --------->ARR14(2)      =================================HOX2a_HOX2a                                        <---------ARR14(2)      ------>ZmHOX2a(1)                                                                --------->LBD16 ------>ZmHOX2a(2)                            <---------CCA1(2)                       <---------HSFB2a(2) --------ARR11(3)                        <---------CCA1(2)            <---------MYB52(1) <---------GLK1(2) --------ARR14(2)               ------>ZmHOX2a(2)                  <------NtERF2<---------ANAC58 ------->ARR14(2)              <------ZmHOX2a(2)                  ------>NtERF2 <---------ANAC58   -- ------->ARR11(3)             <---------ARR14(2)                 --------->DEAR3(1)   --------->HSFB2a(2) ---->HSFB2a(2)      ---------->DOF2---------->ID1              --------->MYB46(3)   <---------LBD16 -----HSFB2a(2)<----------DOF2--------->ARR11(3)           <----------DOF2--------->ARR11(3)      ---   agatcgtcctcgtcaagcttttctaaagaggcgatctcgtcgtctatcttatcttccatagctttagccaccgttagaacttgcttctccagaatctgcc  8246900                                                                                    <---------------AtSPL8                                                                          <----------DOF2             <-----------GT1                                             <---------ANAC58 --------->GT1                            >>>>>>>>>EIN3                  <---------ANAC58 ------>AtLEC2                          <-----------GT1 <---------YAB1  <-------TEIL<---------------AtSPL3   atggaaaaatccaaattacaaaatcaattcactgaaaaatttatacattgcgaaattgaagattgaattagaagtgcgttttcgaaatggtacctcttga  8247000                                                                                         <------MYB46(1)                                                                                         <------MYB83                                                                                        <---------TOE2(3)                                                                                    *TSS--------->MYB59                                                                              ------>ZmHOX2a(2)              <---------MYB46(3)                                             <------ZmHOX2a(2)             <--------P                                                     <---------ARR14(2)     --------->ANAC58                                                       --------->ARR14(2)     --------->ANAC58                   --------->GLK1(1)                   <---------ARR11(3)   --------->ARR14(1)                   <---------GLK1(1)                   --------->ARR11(3)  --------->ARR14(2)                  <------ZmHOX2a(1)                     --------->AGP1  <---------ARR14(2)           --------->GLK1(2)                            <---------AGP1  <---------GLK1(2)            --------->ICU4                              <---------CCA1(2) <------ZmHOX2a(1) <----------DOF2  <---------TOE2(3)                     ----------->ARR10   ataggattcgccatggttgttctttgctctgcaattctgaggatttcaaattttctgaagttttttttttttggtttagatcttgcagattaggtttttg  8247100                                  --------->ANAC55(2)                                  --------->O2                        ----------->HVH21                       ------->MYC4                       ------->PIF5                       ------->MYC3                       <-------PIF4 ----------->HVH21                       ------->MYC2------->PIF5                       <-------MYC2------->MYC3                       <-------MYC3<-------PIF5                       ------->PIF4<-------MYC3                       <-------PIF5<-------MYC2                       <-------MYC4------->MYC2                      ======================bZIP_bZIP                      <---------TGA1a                      <---------O2<---------TGA1a                      --------->ANAC55(2)                      --------->ANAC58                      --------->O2--------->TGA1a                                                   -                      --------->TGA1a                                                               <                      --------->bZIP60(2)                                                       -----                      <---------ANAC55(2)                                     <---------TOE2(3) -----                      --------->ANAC58                                   <--------HAHB4   <---------AHL20(2)                      --------->ANAC46 <---------ANAC46         ------------>CBF   ------>NtERF2<----                    <------------OsbHLH66      <---------AHL20(1)       --------->ICU4    --------->AHL20(2)              --------->ATHB12    <---------O2 --------->AHL20(1)   <---------ATHB12<----------------             --------->ICU4       --------->ANAC46            ---------->ID1 <-----------GT1 <-------             <---------YAB1       --------->bZIP60(2)       --------->MYB59<---------YAB1--------->AHL20(2)   gtttctatgaagaagatgattagcacgtgacattccacgtgacttaaaaaatattaagaagtttggcccaatcgattattaacgaggcccatttaatcaa  8247200                        --------->ARR14(2)                        <---------ARR14(2)                       ------>MYB46(1)                       ------>MYB83     --------->YAB1                     <---------------AGL15                     <---------MYB59  ------->TEIL  --------->ICU4     --------------->AGL15  <---------ATHB12  ----------------->AG--------->ATHB12 -------->GLK1(1)   ----------------->AGL1 ---------GLK1(1)   ----------------->AGL3                                    <---------------------- ---->ANAC58        <-----------------AGL3                         --------->ATHB12 ---->ANAC58        <-----------------AGL1                        <---------YAB1 -----TOE2(3)       <-----------------AGL2                       <---------TOE2(3)          <-------- -----WRI1          ----------------->AGL2                      <-----------GT1      <----------DOF2 --ATHB12         <-----------GT1  <---------ATHB12   <---------AHL20(2)    <---------AHL20(2)<------   ggaaatcatggaaattgaatttaccaaatttgggcctatgaatcatggaaattgaatttatcaaatttacgattgcattttttttttcttttatattttt  8247300                                                                                  <---------ARR11(3)                                                 <---------AHL20(2)               --------->ARR11(3)                                              <---------AHL20(2)                 --------->YAB1                                             --------->AHL20(2)                 <---------YAB1     <-  --------->AHL20(2)                         <---------AHL20(2)       ----------->GT1              -- --ANAC81                             ----------->GT1             --------->AHL20(1)            <---- -AHL20(2) ---------->DOF2           <---------TOE2(3)            --------->ARR11(3)    <-----------GT1 ---AHL20(2)                      <---------MYB52(2)        --------->YAB1 --------->ZAT6 <---------YAB1   ttttttatataagaaaagaaaacgattgtatttgtaactaatgtaaattaaatatttgaatatcaaaatatactgtaatactatgatatttcactattgt  8247400  <---------TOE2(3)     <---------ANAC58       --------->ARR14(2)                               -----  <---------YAB1        <---------ANAC46       <---------ARR14(2)                        --------->ALFIN1 --------->AHL20(2)     <---------ANAC58       <---------ARR11(3)                       <-------MYC2- --------->YAB1     --------------------->WRI1 --------->ARR11(3)                       ------->MYC2- --------YAB1      <-----------RAV1(1)   ----------->HVH21            --------->TOE1(2) ------->MYC3< ------->ICU4    <----------DOF2   ----------->RAV1(1)              ------->TEIL        <-------MYC3< -----YAB1    <-----------GT1      --------->AtMYB61   <---------AHL20(2)            <---------DOF5.7(2)   cattaatattgttttttttctttgttgtgtgtttcgaccacaaatgacagatattgttttattctatatgaacgtatgatgtctagtaaacgtgctggta  8247500             <---------ICU4       ----------->GT1 <---------CCA1(1) <---------RVE1(1)                                  <---------AHL20(2) ----->DOF2 --------->ICU4                          --------->AHL20(2) -------->ARR11(3)                              --------->AHL20(2) -------->AHL20(1)                  <---------TOE1(2) ---------AHL20(1)                 ------>ZmHOX2a(1)<---------YAB1                                <-- ---------ARR11(3)       ------->TEIL           <---------AHL20(2)    <---------TOE2(2)     <--------   aagatatttgggtaatattggcatatgtatgtttgtcctaagtttttcatttatataattgtagtagtcacctatgttatatcatcgaagtatagaggta  8247600  Previous    Next  AGI:  At2g18990.1    Description:  TXND9 (THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 HOMOLOG). Identical to Thioredoxin domain-containing protein 9 homolog [Arabidopsis Thaliana] (GB:O64628); similar to thioredoxin-related [Arabidopsis thaliana] (TAIR:AT3G25580.1); similar to unknown [Populus trichocarpa] (GB:ABK93948.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Thioredoxin domain (InterPro:IPR013766) Range:  from: 8245773    to: 8247084    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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