Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <---------REM1(1)                                                        <---------------AtSPL8                                                        --------------->AtSPL8                       <---------YAB1           <--------P                     <---------ANAC55(2)        <---------WOX13(1)                     --------->ANAC55(2) <---------AHL20(1)                    <-------TEIL         --------->AHL20(1)                   <-----------GT1       <---------AHL20(2)                ----------->GT1         <---------AHL20(2)              <------ZmHOX2a(1)      <---------AHL20(2)                --------->AHL20(2)    --------->TOE2(3)            <---------ARR11(3)     <---------------AGL15          --------->ICU4    --------->ALFIN1 ----------->GT1     --------->ARR11(3)    <-----------------AG--------->ATHB12--------->YAB1<-----------RAV1(1)    <----------DOF2 ->ZmHOX2a(1) ---------->DOF2<---------YAB1   <---------MYB46(3)  ---------->DOF2<----------DOF2   agagttgttttatttggaaagttacatgattgtgagtgctaattatattggttgatgtgttgtaccataaaagaggaaactttctttgtctaagatgttc  8183700                         <-----------GT1                      >>>>>>>>>GATA-3                      --------->ARR14(2)                      >>>>>>>>>GATA-2                      >>>>>>>>>GATA-1                      >>>>>>>>>GATA-4                                                               <                ------->TEIL       <----------DOF2                ------->TEIL                <------             --------->ICU4       <---------ANAC58                --------->ARR11(3)        <--------             <---------YAB1       <---------ANAC58  ------->TEIL <---------CCA1(2)        <---------ZAT18        --------->YAB1<---------ARR14(2) <----------DOF2----------->GT1 ---------->ID1 <---------ANAC46   ttggaacttatagtaatgaatgtggattcactacttgctttgtctttgtgaatgaatgtggaaacatgtatcttgttctcttctgggttttgtgagcttt  8183800                                                                                 <---------TOE1(3)                                                                                 <---------TOE2(3)                                     <---------At4g35610                 <---------MYB46(3)        <-                                     --------->At4g35610               <-------GAMYB               --                         <-------GAMYB                                 <<<<<<<<<<AtWER            <-- ------------CBF      <---------ANAC58                                <---------MYB46(3)       <----- ----DOF2             <---------ANAC58 ----------->RAV1(1)          <---------LBD16         <-------- -At4g35610    <---------ZAT14      --------->ANAC46                <---------At4g35610 <----------DOF2   tgtattgttgtttctagttctctggctcgttgatgtctcagcaacatgtagaatttgagttgttttgttctgcggttgtagttgaggtttctttgtgtta  8183900                  <---------ARR11(3)            ------>MYB83    --------->ANAC46                                     <------MYB46(1)    --------------->AtSPL8                               <------MYB83 <---------REM1(2)<---------GLK1(2)                      ----------->GT1 --------ZAT14    --------->ARR11(3)                    --------->MYB59 ------->ZAT14  ----------->ARR10                       --------->MYB46(2)        <---------YAB1   <- -------------AGL15                        ------>ZmHOX2a(2)                 <----------DOF2     ---- ------GT1  ------>MYB46(1)               --------->At4g35610             ------->TEIL         <----- -ZAT6    <---------MYB59                 <---------At4g35610          <---------REM1(1)     <-------TEIL   ctgtacaaggtaccaaattagattttctagttgcataaattttgatctgaaatgaagtttggtaaacaagctcatgtagcttttatttttgttgatacat  8184000                                                    ----------->HVH21                                                  --------->At4g35610                                                  <---------At4g35610                                                <-----------RAV1(2)                                            <---------ZAT2                                            --------->ZAT2                                            --------->At4g35610                                           <---------ARR14(2)                                           --------->ARR14(2)                                        --------->LBD16 ------------>CBF        <------ZmHOX2a(1)              <-----------RAV1(2)  <---------YAB1                       <---------HSFB2a(2) --------YAB1                          --------->HSFB2a(2) ------->GT1                   <<<<<<<<<TBF1<---------At4g35610      --------->At5g28300 -------CBF------------>CBF<-----------GT1<------ZmHOX2a(1)         ----------->GT1    ---------->DOF2   tgttattttaggacacaataagcttgttttttcttcttcatccaggagctgcaggtgactcaatgggaagcagtaaaatgagttttgatcaaagaagaca  8184100                                                                                     <---------ANAC58                                                                                     <---------ANAC55(2)                                                                                     <---------ANAC58                                                                        <-------TEIL <---------ANAC46                                                                       --------->CCA1(2)                         --------->LBD16                               --------->GLK1(2)                     <---------ARR14(2)                               --------->ARR14(2)                     --------->GLK1(2)                                <---------GLK1(2)                     --------->ARR14(2)                    <---------At4g35610       --------->ANAC55(2)              --------->ETT(2)       ---------->DOF2       --------->At4g35610       <---------ANAC55(1)              <---------ETT(2)      --------->AHL20(2)     <---------ZAT2 --------->HSFB2a(2)         --------->At4g35610        <---------AHL20(2)     --------->ZAT2 <---------HSFB2a(2)   -----         <---------At4g35610     --------->GLK1(2)  <------ZmHOX2a(1) <---------ARR14(2)<-------TEIL-   acttgtcttgaagctgtcgaaagaatccgagagagaatttaaagaagtcttgaaggactggagctgcaacgagattcgagagctcttacgtgcagaatca  8184200             --------->ZAT18             <---------ZAT14             <-------TEIL         --------->DAG2        ---------->DOF2              <------ZmHOX2a(2)     --------->CCA1(2)              <---------ARR11(3)                                           ----    --------->ARR11(3)              --------->ARR11(3)                             <------ZmHOX2a(2)    <---------ARR11(3)  <---------TOE2(3)                                         --------->ARR11(3) ----->DOF2  --------->ZAT14      ----------->ARR10                       --------->ZAT6 <---------ANAC46 --------->DOF2       ----------->HVH21          <----------DOF2 ---------->DOF2  <---------ARR11(3)   aagaaagatataaagtacaccggtttgacgaaagatgagatcatcacaaggcttttcaacattgtatcaaagaaaaacactagagatcatgaggtagaag  8184300                                ------>ZmHOX2a(2)                               <------ZmHOX2a(2)                              --------->ARR14(2)                              --------->AGP1                              --------->ARR11(3)                --------->ANAC58                              --------->ARR14(3)                --------->ANAC58                              <---------ARR11(3)              --------->MYB52(1)                -----                              <---------ARR14(3)        ---------->DOF2                     <--------                             --------->GLK1(1)          --------->MYB52(1)                  ---------                             <---------GLK1(1) --------->At4g35610                         ----------                        ---------->DOF2     <---------MYB52(1)<---------DOF5.7(2)        <-----------GT1 ------->GT1   ---------->DOF2<---------ARR14(2)  ---------->DOF2           <----------DOF2----------   agataattccatcaccaaaaagacagaaaagagatcttgtgactccattagctaaagctaaaggtaacgaaacatgttctttagtagtaattctccattt  8184400 ---->YAB1 -------AGL15                 ------->TEIL       --------->ANAC58               <---------ANAC58 ------>AGL15         ------>ZmHOX2a(1)          --------->ANAC58   <-----------HVH21 ------->AGL2     <---------ARR11(3)   --------->ATHB51----------->GT1          <---------ANAC58 ------->AGL3    <---------CCA1(2)  --------->YAB1    ----------->GT1    --------->ARR11(3)     -----   atagcattcttctgtttctatatcctaacatgaacatagcataatttgatcaggcaagggtaaaatgtattgtcagaacttggcttgccagaataaacta  8184500                                                                  ------>ZmHOX2a(2)                                                                --------->ARR11(3)                                                                <---------ARR11(3)           <---------DAG2                          --------->YAB1<------ZmHOX2a(2)           <----------DOF2                <----------DOF2       <---------ARR14(2)             ------     --------->ANAC58               --------->ARR14(2)      ---------->DOF2                   <------     --------->ANAC58               <---------ARR14(2)      --------->YAB1                    -------   <------ZmHOX2a(1) --------->DAG2 ------->TEIL  <---------YAB1--------->ARR14(2) --------->TOE1(2) ---->MYB52(1)     ---------->DOF2 <---------CCA1(2) <---------YAB1 ------>ZmHOX2a(1)         <------   agagaggaagccactttttgcaaaaggtgctcttgttgtatctgctttaagtatgatgacaataaagatcctagtctctggttaacctgcaattcagatt  8184600  Previous    Next  AGI:  At2g18880.1    Description:  fibronectin type III domain-containing protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G30200.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G30200.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO43227.1); contains InterPro domain Fibronectin, type III (InterPro:IPR003961) Range:  from: 8184078    to: 8185870    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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