Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     --                                                                                                  <--                                                                                                -----                                                                                               <-----                                                                                           --------->AHL20(2)                                                                                           <---------AHL20(2)                                       <---------AHL20(1)                                 <---------AHL20(1)                                       <---------AHL20(2)                                 --------->AHL20(2)                                      --------->YAB1                                      <---------AHL20(2)                       --------->ARR14(2)               <---------ANAC55(2)         <---------ANAC55(2) ---ARR14(2)           <---------ARR14(2)          ----------->GT1                  --------->ANAC55(2) ---ZAT14  <-----------GT1       ----------->GT1  <---------TOE2(3)                <-------TEIL------   ccaatgcccaatttcacatttagcatatatacaaatagtataatatttgtataatgttacatatactacaattttcaaaaaatgatacataatttaattt  8176300                                                                                               ------                                                                                        --------->GLK1(1)                                                                                        --------->At4g35610                                                                                        <---------GLK1(1)                                     <---------ALFIN1                                   <---------At4g35610                                    --------->ANAC58                             ====================                                    --------->ANAC58                             --------->O2 -------                                    --------->ANAC46                             <---------ANAC58                                  <---------AtLEC2                               <---------O2 ------>NtERF2                       ----------------------->TaNAC69(2)                        <---------bZIP60(2)                       <---------ARR14(3)                                        --------->ANAC55(2)                       --------->ARR11(3)                ----------->GT1         --------->TGA1a      --------->MYB52(1)         --------->ZAT14         <---------ZAT6          <---------ANAC46   --------->ANAC46    --------->ARR14(2)           --------->STY1(2)            <---------ANAC58 ------->YAB1          <---------ARR14(2)     ------->GAMYB                      <---------ANAC55(2) -------YAB1           <---------ARR11(3)     =============================================MYC_MYB--- ---->YAB1 <-----------HVH21     <---------ZAT14    <---------STY1(2)            <---------TGA1a----- ----AHL20(2)          --------->ARR14(3)    --------->MYB46(3)                  ==================== --->AHL20(2)        ----------->ARR10       <---------MYB52(2)                  <---------ANAC55(1)<   ataatacacaacgagtcacgacgaagatattgctctgcacgactccaacgaactagctagagtaaaaaacgttgctaagtcttacgtggcatctcccgcc  8176400                                                                                                  ---                                                                                              -------                                                               ------->GAMYB                  -------               --------->MYB59                                --------->ANAC58                -------       <---------At4g35610                                    --------->ANAC46                -------       --------->At4g35610                                  ------>MYB46(1)                   ------- --->ANAC46 ------------>MYB.PH3(2)                         --------->MYB52(1)          --------->YAB1 ========================MYC_MYB                            ------>MYB83                -------->HAHB4 -->LBD16---------->DOF2                                  --------->MYB46(3)           <---------YAB1 -------->RAV1(1)                                         <---------MYB55(2)         <---------ICU4 ---->MYB46(3) --------->MYB52(2)                        --------->ANAC46            --------->YAB1 ===================bZIP_DOF                     <---------------------WRI1       --------->YAB1  --- ---------ATHB12  --------->ATHB12            ---------->DOF2 --------->ANAC58--------->ZAT6  <------   caacaattcagcaaagttagttattgaatgctgtttagttattctcagtaatgcgatagacccaacgaaactatagacgaccactaataataatacacgt  8176500                                                               <-------TEIL                                                            <---------ANAC58                                                            <---------ANAC46                                                            <---------ANAC55(1)                                                            --------->ANAC55(2)                                                   --------->ZAT14                                                   <---------ZAT14                                     --------->ANAC58       <---------ANAC55(2)--------->YAB1                                     --------->ANAC55(1)    <---------ANAC58   --------->AHL20(2)                                    <---------LBD16--------->ZAT18    --------->YAB1                          <-------MYC3             <---------ZAT18   <<<<<<<<<ARR2                          ------->MYC3          <---------ANAC58 ------------>CBF                         <---------TGA1a        <---------ANAC58--------->ANAC58                 <---                         --------->TGA1a--------->ARR14(2) --------------->AtSPL8         <---------AHL20(2) ------>ANAC58           --------->O2<---------ANAC55(2)   <-----------------------TaNAC69(2)  <----- -->ANAC55(1)            <---------O2--------->ANAC58    <---------MYB52(1)   <---------ATHB51<------ -->ANAC55(2)            --------->ANAC55(2)    <---------ANAC46--------->ANAC58         --------->AHL20(2) -->ANAC46               <---------ANAC55(2) XXXXXXXXXXXXXXXXXXXX>MIR397A     <---------ATHB12<------ -->ANAC58               <---------ANAC46    XXXXXXXXXXXXXXXXXXXX>MIR397B   --------->WOX13(1)------- -->ANAC58 --------->MYB46(3)    --------->CCA1(2) <---------ABI4(2) <---------ATHB12 --------->ATHB12 ------>ANAC58         ------------->DYT1 <-------TEIL  <-----------HVH21 ------------>CBF--------->AHL20(2) ---ANAC55(2)       --------->WOX13(1)  <---------ARR14(2) --------------->AtSPL3<---------YAB1------   aagcaaaaatcgaaccactaaacaatcacgtgaagaaacacggatacattgagtgcaccgttacgtacacaatcaaaccaattataaatgatttaattta  8176600         --------->ANAC46      <---------ZAT18      --------->ZAT14      <---------ZAT14   ------>ZmHOX2a(2) ---------CBF          <------ZmHOX2a(2)              *TSS                                       ---- ----AHL20(2)         --------->ARR11(3)            <----------DOF2      <----------DOF2         <--- ---AHL20(1)          <---------AGP1           <---------At5g28300   <-----------GT1         -------- ---AHL20(2)          <---------ARR11(3)--------->ANAC58            <---------AHL20(2)      --------- -->AHL20(2)          --------->AGP1    --------->ANAC58       <---------DAG2              ---------- --->AHL20(2)--------->LBD16            <---------ALFIN1       <----------DOF2       ----------->GT1   attgtctgttcactccccaagatagatctatccaagagagacacacattcactgcttttgactcacttttttaatctttttggattttggtgaaaaagtt  8176700                                                  ------------>AtMYB77                                                  --------->MYB52(1)                                                 --------->ANAC46                                                 ----------->HVH21                                           <------NtERF2                                           --------->At4g35610                                          <---------ATERF1(1)                                          <---------RAP2.3(1)                                          <---------DEAR3(2)                                          <---------MYB46(3)                                         <---------ANAC46                                     <---------LBD16                                     <---------At5g28300                                  <-----------HVH21  <---------MYB46(3)       --------->LBD16                             <------NtERF2------>NtERF2                     <---------LBD16                            ------>NtERF2<---------DEAR3(1)                ------->TEIL                           <---------ANAC46--------->ATERF1(1)           --------->ZAT14                          --------->RAP2.3(1)  --------->REM1(1)         <---------SPL7    ---------->ID1       --------->LBD16 <---------RAP2.3(2)             <---------ZAT14 ----->AHL20(2)          ------>NtERF2   <---------RAP2.6(2)         <---------WRKY18(1) ------AHL20(2)          <---------ATERF1(1)  <---------REM1(2)     --------->WRKY38(1) --->GT1                --------->ANAC46--------->RAP2.6(3)       --------------------->WRI1 >DAG2                  <---------DEAR3(1)<---------ERF1       <-----------HVH21 --------->GLK1(1) >DOF2  <----------DOF2<---------LBD16--------->ANAC46<-------GAMYB --------->WRKY12              ---   taatttgtctctttctctatttatctccggcgtcaatttcacggcggctacacgacggttatcgatgtcattgactgtaccggagttcgatttcagagta  8176800                                                                                                  <--                                                                                                  <--                                                                                          <---------ALFIN1                                                                                        ------>NtERF2                                                                                       <---------bZIP60(1)                                                                                       --------->ANAC46                                                                                       --------->ANAC58                                                                       <---------ANAC58--------->ANAC58                 --------->YAB1          <---------ARR11(3)      <---------ANAC46   ----------->HVH21                <---------YAB1       --------->ANAC55(2)         <---------YAB1     --------->WRKY12                <---------ATHB12     --------->ANAC58       <-----------RAV1(1) <---------YAB1   ----              --------->WOX13(1)     --------->ANAC58       <---------MYB46(3)--------->YAB1   <-----        <----------DOF2              --------->ANAC46   --------->ATHB12   <----------DOF2----------- ------>ICU4<<<<<<<<<GATA-1      <----------DOF2       <-------TEIL    <---------ANAC58--------->bZIP60(1)   attcttctctctttatctatcattctctctcactgcttcacgaaatctctcttaagcttcatttgttgtgtttgcttcttttatagttgacgccacagtt  8176900                   ----------------------->TaNAC69(2)                  ------>ZmHOX2a(2)                                                     <-----------HVH21                 <------ZmHOX2a(2)                                                     --------->WOX13(1)                <---------ARR14(2)                                                  <---------ARR14(2) ----MYB46(1)   --------->ARR14(2)                                                  ------->TEIL ----MYB83 <---------WRKY38(1)                                                 <---------ANAC46 ----->MYB59    <-----------HVH21         <---------TOE1(2)               <-----------GT1        ---- ----MYB52(1) --------->MYB46(3) <-----------HVH21              --------->ARR14(2)  --------->ARR14(2) >RAV1(1)<-----------HVH21       <-----------TGA1               <---------ARR14(2) <---------CCA1(2)   tggtttctcacagtcaccgatcgggtgagttttctcgtcatttctaggttttttgttctccgattggattcgatttttactctgtgtatccatcagggag  8177000                                                                                    <---------WRKY18(1)                                                                                   ----------->HVH21                                                                                  <----------DOF2                   --------->GLK1(2)                                             <---------ANAC58           <---------MYB46(3)                                              <---------At4g35610          <---------ARR14(2)                                        <---------ARR14(2)        --------->LBD16                                             --------->ARR14(2)      <---------LBD16                --------->ANAC55(2)            <---------GLK1(2)     <---------ANAC46<---------LBD16 <---------ANAC55(2) <-----------HVH21 --------->At4g35610      - ------->GT1  <---------YAB1  ----------->GT1   --------->YAB1  <---------LBD16  <---------ANAC58   <   cgtaatttcgcggatgttgataatctggagaactgtattaagtatttgaatcagagcttagtcacctctggattctctgcttcgcttgacctcttcgcta  8177100                 <---------ICU4                 --------->YAB1                <---------YAB1                <---------ATHB12                                                                   <<              <-----------GT1                                                                   <----        <---------ANAC58                                                                    <--------        <---------ANAC58                                                            <------MYB46(1)<-    ------>ZmHOX2a(1)                                        <---------At4g35610    <------MYB83----- <------ZmHOX2a(2)                         <-----------GT1   --------->At4g35610   <---------TOE2(3) -------->ARR14(2)                    <---------ANAC46      ------->TEIL           --------->MYB59 -- ---------ARR14(2)                   ---------->ID1      <---------REM1(1)------->TEIL   <---------YAB1   ccgatcctgtgcgttttaatcattctctaattgttttttttcgtttatcgatttgtttgatgaagctgattcgatgaacttgtattaggtttcgattgct  8177200  Previous    Next  AGI:  At2g18876.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G57410.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43234.1); contains domain PTHR21736:SF12 (PTHR21736:SF12); contains domain PTHR21736 (PTHR21736) Range:  from: 8176654    to: 8179605    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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