Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           --------->ALFIN1                                       <---------TGA1a                                       =====================================MYC_MYB                                       =================================================bZIP_DOF                                       <---------ANAC46                                       <---------ANAC58                                       <---------ANAC58                                      ------->TEIL                                      <-------TEIL                                    --------->TOE1(2)                                    <---------SPL7                                   --------->ANAC58                                   <---------ANAC58                                   --------->ANAC58                                   <---------ANAC58                                  ------->TEIL                                  <-------TEIL                                <---------SPL7                                --------->TOE1(2)                                ------------------>SPL14                               --------->ANAC58                               <---------ANAC58                               --------->ANAC58                              --------->SPL7                              <---------TOE1(2)                            <---------SPL7                            --------->TOE2(2)                           <---------ANAC58                           <---------ANAC55(2)                           <---------ANAC46                           --------->ANAC55(2)                                                   ----                           <---------ANAC58                                  <----------DOF2     <---                      ------->TEIL--------->SPL7     --------->TOE1(3) <---------ARR14(2)        ----                <---------AHL20(2)<---------TOE1(2) --------->ZAT6     --------->ARR14(2)        ----             <---------AHL20(2)<---------ANAC58    -------->P    <-----------GT1                 ----            --------->AHL20(2)<-------TEIL      <---------MYB52(2)  ------->GAMYB            <------- --AHL20(2) <---------AHL20(2)------->TEIL --------->ALFIN1      --------->MYB52(1)        <-------TEIL   ctcattagaatttataaatttatgtacttacgtacgtacgtacgtgtgcgactaaccctagacaaattaaccgaatactcttttttttgcaaatgcatca  8170900 --------------->AtSPL8 ----->ANAC55(2)                        <----------DOF2 ------ANAC55(2)                 <---------YAB1                           <---------TOE2(3) ----->ANAC46              <---------ICU4                             --------->TOE2(3) ----->ANAC58              --------->ATHB12                         <-------TEIL ----->ANAC58              <--------HAHB4                         <---------GLK1(2) ----HVH21                <---------ATHB12  <---------YAB1     --------->YAB1         --------->ZAT6   cgcatggtaccctaatagtggtgtctccatcatttgtcattactttctgaatgcaaaatgagtaatcagattcattaacatttgactaatactatatttt  8171000                                                        --------->TOE2(3)         --------->AHL20(2)                          <---------YAB1        ---------->DOF2                   --------->YAB1                         <-----------GT1      <---------YAB1                   --------->YAB1  ------                        --------->YAB1      --------->YAB1           --------->YAB1  ---------->DOF2        <-----------RAV1(1)--------->ZAT6  <---------YAB1<---------------AGL15--------->AHL20(2)-----   ctcatattttttgtgggcatagagaattatcagtattttgagcatattataaaagtaatctcaaatgggaaacataacaaataataaaaaagaatgaaaa  8171100                                 --------->ANAC58                                --------->SPL7                                --------->PCF5                                <---------ARR14(2)                                --------->ARR14(2)                    --------->At4g35610                    <------NtERF2--------->ANAC58                 <------NtERF2 --------->ATERF1(1)           <---------ANAC46    <------NtERF2          --------->ZAT2       ------>NtERF2          --------->At4g35610  <---------ATERF1(1)        <---------RAP2.6(2)   <---------SPL7     --------->ALFIN1        <---------ANAC58   <-----------RAV1(1)      <---------LBD16   <---------REM1(1)<---------At4g35610                              <---------GLK1(2)   <---------bZIP60(2)  <---------ARR14(2)  --------->LBD16         <---------ZAT2 ---->DOF2<---------At4g35610<---------ANAC58             ---------->ID1                          --- ---->DAG2<---------ZAT2--------->ARR14(2) <-----------RAV1(2)      <---------At4g35610 --------->YAB1   agttgatgtggctgctggtggcagcaaattggcggaccccatcttccaggttacattcttgtcgttttccagcttcttaacacagagctataatctcatg  8171200                                              <-------MYC3                                              ------->MYC3                                             --------->O2                                             <---------O2                                        <---                                             ==============================MYC_MYB               ----                                             <---------TGA1a                         --------->AHL20(2)                                    --------->YAB1                      ----------->HVH21 --------->AHL20(2)                                 --------->YAB1                       <---------ANAC58   --------->AHL20(2)                     <---------TOE1(2)     <---------ALFIN1           <---------ANAC58   <---------AHL20(2)                    ------>ZmHOX2a(1)   --------->ANAC46          <--------P       --------->ANAC58        --------->ZAT18      --------->LBD16 --------->TGA1a--------->ANAC46  ----------->HVH21<----- ---------->DOF2<---------ARR11(3)  <---------ICU4    --------->YAB1<------MYB83   ----------->GT1<-- ---->TEIL      --------->ARR11(3) --------->ICU4    <---------YAB1 <------MYB46(1)--------->ANAC58   caccaaagagcatactaatatcctatgtctccgagtaataatcagccacgtttctataatagacacaagttggtgtgacactgacaagaaaataaataag  8171300         --------->ALFIN1     ---------->DOF2  --------->HSFB2a(2)                            <---------HSFC1(1)                             <XXXX  <---------HSFB2a(2)                            --------->HSFB2a(2)   <---------ANAC58   <---------GLK1(2) ------ARR11(3)                         ---------->DOF2       <---------GLK1(2)      <----------DOF2 ----->ARR11(3)                 --------->At4g35610       <-----------GT1    ---------->DOF2    <---- ----TOE2(3)                  --------->DAG2     --------->HSFC1(1)    <---------ANAC46  <----------- ---------TBP          *TSS  ---------->DOF2     <---------HSFB2a(2)   <---------ANAC58 <---------YAB1   atttatagaaagtgggaacagaacacaaaaaaaaagctgaaacaaagagttcgagaaaaatttcgattctcttgctcgtaaaagcttcttttgattctct  8171400                                                                                                  ---                                                                                          <---------ZAT2                      ------>ZmHOX2a(1)                                                   --------->At4g35610         <---------ANAC46                      --------->ZAT14           <---------ARR11(3)      <---      <---------MYB52(1)      >>>>>>>>>TBF1    <---------ZAT14           --------->ARR11(3) --------- XXXXXXXXXXXXXXXXMIR1887   >>>>>>>>>TBF1       --------->ZAT18  ----------->GT1           --------->ZAT2 ------DOF2      <---------At4g35610 <---------YAB1         ------>ZmHOX2a(2)             <---------At4g35610 -------------ANAC81----------->RAV1(2) <---------YAB1<----------DOF2---------->DOF2   <---------At4g35610   ttgactctgttttgtggatagctcctgaagaagaagaagatgatggtagtgaacagctttgatctatggcaaaaagatgttttcttctctgcagctgaag  8171500       --------->GLK1(2)    <---------ANAC46       <---------ARR11(3)   <---------ANAC58                                 ------>ZmHOX2a(2)       --------->ARR11(3)   <---------ANAC58------>ZmHOX2a(2)              <---------ARR11(3) <-------TEIL   --------->CCA1(2)         <---------ARR11(3)          <----------DOF2 -------->GT1  --------->ARR14(2)   <---------GLK1(2)          --------->At4g35610 ------------AtSPL8    ----------->GT1    --------->ARR11(3)   <---------At4g35610  --------->AHL20(2) -->HVH21      <---------ARR14(2)   --------->ARR11(3)    <----------DOF2  --------->ARR11(3)   aggttcaaaaatctacagatatgtatggtttcttgttagattttgatcttgtaatctcttctttgagcttagcttttgatcttgcataaattaagagatt  8171600                                                                                               ------                           <---------ANAC46                                                   <------ZmHOX2a(1)                       <----------DOF2                   <---------GLK1(2)                  ---------       --------->AHL20(2)  <---------ANAC58      --------->At4g35610               ----------->ARR10-       <---------AHL20(2)  <---------ANAC58      <---------At4g35610        ---------->DOF2 ---------   gagatgtgtttaatttgctattgttctttacttggattttagaatggagtctgcttatagattgtggattagagagaagaaagatgagatttgtaaggaa  8171700                                      <---------TOE2(3)                                    <---------ATHB51                                <-------TEIL      --------->At4g35610    ----------->GT1  --------->ANAC46           <------MYB46(1)<---------ANAC58  --------->ANAC58           <------MYB83   <---------ANAC46  --------->ANAC58<---------At4g35610--------->YAB1 --->ARR14(2)     --------->At4g35610<---------ICU4                                    --------->ARR11(3) >ANAC58   --------->MYB59  --------->MYB111(1)                                        <---------ARR11(3) --------->DOF2<-------TEIL <---------------AtSPL8                            <---------ANAC58 >ANAC58<----------DOF2    <---------ANAC46 <---------ANAC58                  <---------ANAC58   cttcaagcagctttaggtacagctaaatggcaggtacaataatgtttcttgaaacatttctggtttagttgtgttcttgttcttgtctagttcttgaaaa  8171800  Previous    Next  AGI:  At2g18860.1    Description:  syntaxin family protein. similar to protein binding [Arabidopsis thaliana] (TAIR:AT4G30240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43239.1); contains InterPro domain Syntaxin 6, N-terminal; (InterPro:IPR015260); contains InterPro domain t-SNARE; (InterPro:IPR010989) Range:  from: 8171323    to: 8173056    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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