Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <---------ZAT2                                    --------->MYB52(1)                                   ----------->HVH21                                 --------->At4g35610                                 <---------At4g35610    <---------AHL20(2)         --------->ZAT18    --------->AHL20(1)         --------->ZAT14    --------->AHL20(2)      <------MYB46(1)<--------P                               <---------YAB1   --------->AHL20(2)       <---------ANAC46                                      --------->YAB1   -- -------YAB1                <------MYB83  --------->ZAT2                      --------->AHL20(2)  <-- ---->YAB1                 --------->MYB46(2)                                 <---------AHL20(2) ---- ----YAB1                  <---------MYB46(3)                              ----------->GT1       ---- -YAB1         <---------YAB1  <---------ZAT14                       <---------WOX13(1)         -----   ataaaaaaaattgtatcatttttgtttgtttggtgaactgaccgagttggccattctcagggctcaagtagattgaaagtttaattatactaatagacca  8132200        --------->GLK1(2)      <---------AHL20(2)     --------->AHL20(2)                                                                       <------     --------->AHL20(1)                                     --------->ATHB12                 <-------     <---------AHL20(1)    --------->AHL20(2)              <---------YAB1                   <-------- ------->YAB1           --------->TOE2(3)               <----------DOF2                     <-------- -------ATHB12         --------->YAB1                <-----------GT1                       --------->ATHB12 -->MYB46(1)    <---------TOE2(3)                 --------->TOE1(3)                       <---------YAB1 -->MYB83       <---------TOE1(3)                 --------->TOE2(3)               <-----------GT1 ---->WOX13(1) ---------->DOF2       --------->GLK1(1)  <---------DAG2           <---------CCA1(2)  -   atcagaatataatctgttaaagttaacataaaaatacagaaatctatgtgaacattaacttttcattgcaattagatgtttttatatccatgttgattgt  8132300                                                                        --------->ATHB51                                                                        <---------ICU4                                                                        --------->ATHB12                                                                        <--------ATHB1                                                                        -------->HAHB4                                                                       --------->ICU4                                                                       <---------ATHB12                                                                       --------->AHL20(2)                                                                       <---------AHL20(2)                                                              --------->YAB1                       <- ---MYB46(3)                                           <----------DOF2 <---------ATHB51          ---- --WOX13(1)                                 <---------YAB1  --------->AHL20(2)                   <--- -ANAC58                             ------->TEIL---------->DOF2 --------->YAB1           ---------->DOF2 -ANAC58--------->TOE2(3)        ------->TEIL  <---------YAB1<---------AHL20(2)       <----------ID1- ------>TEIL           ----------->GT1    <-----------GT1   <---------AHL20(2)  <----------DOF2 <----   tgaatcttatccctaatcttgctattggtgaaatgaatgtatttttactattaaagtctttttttaataacaaataattggactttatacaacaaagtat  8132400                                                          <------NtERF2                                                         ------>NtERF2                                                         <---------ATERF1(1)                                                        <---------DEAR3(1)                                                        --------->ATERF1(2)                                                        --------->RAP2.6(2)                                                        --------->DEAR3(1)                                                        <---------ATERF1(2)                                                       <------NtERF2                                                       --------->ORA47(2)                                                       --------->RAP2.3(1)                                                       --------->DEAR4(2)                         ---                                                       --------->ATERF1(1)                       <---                                                      ------>NtERF2                              ----                              ------->PIF4            <---------ATERF1(1)                        <---         <-----------GT1      <-------PIF4            <---------RAP2.3(1)                       -----        <---------ICU4        ------->MYC3           --------->ANAC46                         -------        --------->YAB1        <-------MYC2           --------->ATERF1(2)                   --------->DAG2       --------->ICU4         ------->MYC4           <---------ATERF1(2)             --------->DAG2    --------->AHL20(2)        ------->PIF5          --------->MYB46(3)           --------->ANAC46----    <---------AHL20(2)        <-------PIF5          --------->DEAR3(2)<---------ANAC58    ---------->DOF2   --------->AHL20(2)         ------->MYC2          --------->ERF1    <---------ANAC46--------->ANAC58 --------YAB1               xxxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  <---------ANAC58--------->ANAC58 ----->YAB1                <---------ANAC58         --------->RAP2.3(1)          <----------ID1------ -----HAHB4    --------->TOE2(3)         <-------TEIL--------->DEAR3(1)        --------->MYB52(1)<--- -------->AHL20(2)         <---------ANAC58   --------->ZAT6     <---------GLK1(2)  ---------->DOF2<- -----YAB1     <----------DOF2<-------MYC3   <-------TEIL<---------DEAR3(2)  <---------ATHB12 -------   tattatttaattatcaactttagaatatagcatgtgccaaaaatacatacactagccgccggcccaagaatgtcgtccaataaacgaaaagcaaaagtga  8132500       --------->ANAC58       --------->ANAC58  --------->ANAC58  --------->ANAC58 --------->WOX13(1) --------->GLK1(1)             --------->MYB46(3) --->NtERF2                   --------->ANAC58 ------ATERF1(2)              --------->ANAC58 ----->ATERF1(2)            <---------ALFIN1           --------->ZAT6 ------ANAC46              <---------At4g35610      --------------->AGL15 ---->RAP2.6(3)            --------->At4g35610      <---------------AGL15 ---->TGA1                 <------NtERF2     <---------AHL20(2) ----->bZIP60(1)          --------->ANAC46   --------->AHL20(2) --->MYB52(1)            <---------ZAT18   <----------DOF2 ------bZIP60(1)    ------>ZmHOX2a(2)      --------->TOE2(3) -----NtERF2      --------->ARR11(3)    --------->ARR11(3)     ---------->DOF2 ---->HVH21       <---------ARR11(3)    <---------ARR11(3)    <---------WRKY45 --------->YAB1       *TSS   cggcaatccaagcctactgtgatcttgtccgcacccgataactatctttaattactaaaactagtcaaagtactcgactaatcacaaaactagacaagtg  8132600                     <----------DOF2          <---------AHL20(2)         <---------AHL20(1)         <---------AHL20(2)         --------->AHL20(1)         --------->AHL20(2)        <---------AHL20(2)     <-----------GT1        --------->AHL20(2)    <-----------GT1                                    <-----------GT1    --------->AHL20(2)       <---------AHL20(2)                                <-----------GT1  --------->ANAC58  ------>ZmHOX2a(2)                                     <---------RVE1(1)  --------->ANAC58--------->ARR11(3)                                   <---------TOE2(3)  ----------->GT1 <---------ARR11(3)      <----------DOF2              <---------TOE1(3) ------>ZmHOX2a(1)   tttcaagtaaattaatttttgatcttttcattttatctctctctctttttcttctatccaaaacaccatttttgaggtatttttctctctccttcgaatc  8132700                    <---------MYB52(1)                       <---------ANAC58                  <---------ANAC58                           <---------ANAC58                  <---------ANAC58                     --------->ARR11(3)              <----------DOF2      <----------DOF2     <---------ARR11(3)                   ---------     <---------TOE2(3)<---------MYB46(3)            --------->AHL20(2)                     ----------     <---------TOE1(3)--------->MYB52(2)         --------->YAB1              --------->ATHB12     <--   gaattttcaggtttctctttccgtttgtttgaagaagcttttaagtagaattcataaaatcttgcttagcttctgggtttgatttgtttgtggtaaagtt  8132800                                                <------MYB83                                                <---------MYB46(3)                                                <------MYB46(1)                                               --------->MYB46(2)                                               --------->ALFIN1                                               --------->MYB111(1)                                               <---------MYB46(3)                                               <---------DEAR3(1)                              <---------YAB1   <---------AtMYB61         ------>ZmHOX2a(2)                          <---------GLK1(1)    --------->MYB55(2)      <---------ARR11(3)                         --------->ARR14(2)    --------->MYB111(2)     --------->ARR11(3)        ----                    <---------ZAT2            <--------P          <---------ANAC58               <---   <---------AHL20(2)    <---------ARR14(2)   <---------MYB55(1)  <---------ANAC58              ----- >DAG2              --------->ZAT2  <----------DOF2           <---------ANAC58             --------->HSFB2a(2) >DOF2              --------->At4g35610      <-------GAMYB    <---------ANAC58             <---------HSFB2a(2) -------YAB1        <---------At4g35610  <---------LBD16    <-----------GT1      <------ZmHOX2a(2)   ttgattttttttttagtttgagagctggatttgtgattctttctctgggttggtgaagttttttacttgcttcgatcttatagatcagagcttctagcag  8132900                                                                                            ---------                                                                                          ------->GAMYB                                                                                       ==============                                                                                       ----------->RAV1(1)                                                                                  --------->ZAT2                                                                                  <---------At4g35610                                                                                 ----------->RAV1(1)                                                                               --------->At4g35610                                                                               --------->ZAT2                                                                              =======================                                                                              ----------->RAV1(1)                                                                            --------->At4g35610                                                                            <---------At4g35610                                                                          --------->YAB1 --------->MYB46(3)                                                                      <---------YAB1 --------->At4g35610                                                                    --------->YAB1--------->At4g35610 ------->GT1                           <---------YAB1              <---------YAB1==================== ------ANAC46               <------ZmHOX2a(1)                 <------ZmHOX2a(1)<---------At4g35610 ---->At4g35610            --------->ZAT18        ----------->GT1<---------At4g35610--------->RAP2.6(2)   cgtaaaaaatgcagacgaggtatatggagaggactaatagtatgagagagaagagaaaattggaggaagatgataatcagcagcagcagcaacagcctga  8133000                                                                  <---------ANAC46                                                                  <---------ANAC58          <---------At4g35610                                <---------ICU4  ---------->DOF2   ----------->GT1         --------->ICU4  <---------YAB1 -->RAV1(2)      <---------AtLEC2    <---------ANAC46 --------->ATHB12     ------->TEIL ===RAV   --------->ZAT2             <---------ANAC58<---------YAB1  <---------MYB46(3)            <- ===RAV   <---------ZAT2             <---------ANAC58--------->ICU4<-------GAMYB     --------->ATHB12 ===RAV   --------->At4g35610      <---------YAB1 <---------YAB1  <---------ANAC58 <---------WOX13(1)   gcgtaaaaggccagctcttgcaaggtaatttgtgttgatgcttgtaatttttctgattattgattatggcgttgttgaatctgtaattgatttgtagttg  8133100  Previous    Next  AGI:  At2g18750.1    Description:  calmodulin-binding protein. similar to calmodulin-binding protein [Arabidopsis thaliana] (TAIR:AT5G57580.1); similar to calmodulin-binding protein [Arabidopsis thaliana] (TAIR:AT4G25800.2); similar to calmodulin-binding protein [Arabidopsis thaliana] (TAIR:AT4G25800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43283.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16596.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66517.1); contains InterPro domain Calmodulin binding protein-like (InterPro:IPR012416) Range:  from: 8132600    to: 8135702    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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