Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <-----------GT1                                         ---           <-------TEIL               <----------DOF2                                             <--    --------->YAB1                 <-----------GT1                                                ---   <---------ATHB12               <-----------GT1            ----------->GT1                   ------ --------->WOX13(1)           --------->ARR11(3)          <-----------RAV1(1)     --------->AHL20(2) -YAB1    --------->CCA1(2)   <---------ARR11(3)  <-----------HVH21  --------->YAB1     <-----------GT1   catcaatcaaagattcaaaatataaaaaatgagattttaacttttaagcatatgtcatttgtgttgttatatcatcgtccaagtttaaatttacaaaacg  8099900       ----------->GT1       <---------TOE2(3)                                        --------->ANAC58 ------>ARR14(2)                                    --------->TOE2(2)--------->ANAC58 -------ARR14(2)                 --------------->AtSPL8         --------->ANAC58 ---->TEIL                       <---------------AtSPL8         <----------ID1 ----->GT1   ---------->DOF2---------->DOF2         --------->TOE1(2)--------->ANAC58   tatattgttaagaaaaaaagagagcaaaccaaaagaatgtacaaaatttcaaaacgtccgaatcaaacgacaagctatgttcagaacgagtatttagaat  8100000                                                                         <-----------GT1                                                                      <----------DOF2                                                              --------->KAN4(2)                                                             --------->KAN4(1)                                                             --------->HSFB2a(1)                                                             <----------TaMYB80                                                             --------->HSFC1(2)                                                             <---------KAN4(1)                                                             <---------HSFB2a(1)                                                            <---------ARR14(2)                                                            <---------KAN4(2)                                   <----------DOF2          ---------->TaMYB80                    <---------------AtSPL3                  --------->ARR14(2)      --------->GLK1(2)         <-----------GT1  --------->YAB1<-----------GT1               <<<<<<<<   tagtagcgattccataggcctccaagtacgaatattacttttaaaactaaattataagttcgaatattccatctttttccatactatggtcttaaaaaca  8100100                                          --------->ATHB12                                          <---------ICU4                                          -------->ATHB1                                          --------->ATHB51                                         <---------AHL20(2)                                         --------->ICU4                <---------AHL20(2)               <---------ANAC58 ----------->GT1                    --------->AHL20(2)         <---------YAB1         <---------YAB1                    <---------YAB1        --------->ARR11(3)      --------->ICU4           <---------RVE1(1)        <---------ARR11(3)  <---------ARR11(3)          <---------ARR11(3)       --------->YAB1       --------->ARR11(3)          --------->ARR11(3)         --------->ETT(2)      <---------YAB1  ------>ZmHOX2a(1)  <---------ATHB51<---------CCA1(1)    <---------ANAC58     <-    --------->YAB1   --------->TOE1(3)   <---------YAB1 <---------ARR14(2)    <---------ANAC58     --   --------->ICU4    --------->TOE2(3)   --------->AHL20(1)    <---------YAB1 <---------ANAC46    --- <<<<<<<<<LFY  <---------ANAC58<---------TOE2(3)      ----------->ARR10--------->AHL20(2)  <---------   gtgggatgatgatatttgcttatccttcaagataatgtttaaaattattggatgagaagatatttcttattatttatatttcttgtagacatggagccaa  8100200            --------->AHL20(2)            <---------AHL20(2)            ----------->TBP          <---------AHL20(2)          ----------->TBP          --------->AHL20(2)        <---------AHL20(2)        ----------->TBP    <---------ARR11(3)                                    --------->ANAC55(2)        --------->AHL20(2) --------->ARR11(3)                                    <---------ANAC55(2)    --------->AHL20(2)  --------->AHL20(2)              --------->DAG2  --------->ARR11(3)    <---------AHL20(2)  <---------AHL20(2)             ---------->DOF2  <---------ARR11(3)         -- --------AHL20(2)  --------->ICU4             ---------->DOF2       --------->DAG2                 -- ------->AHL20(2) <---------AHL20(2)  --------->ANAC55(2)          ---------->DOF2                 -- ------>AHL20(2)<---------AHL20(2)    <---------ANAC55(2)----------->GT1<-----------ARR10     <------ -ID1 ----------->TBP  --------->AHL20(2)   ------>ZmHOX2a(2)   --------->AHL20(2) ----------->HVH21   aaaaatttatatatatatataaaaattaaaatcttttatcacatgatccaaagcccaaaaagtaaaataaaaagtatctcatcacatgaccatttttaac  8100300                                                                     <-----------TGA1                                                                    <---------ANAC46                                                                    <---------ANAC58                                                                    <---------ANAC58                                                                    <---------ANAC55(2)                                                                 <---------WOX13(1)                                                                <---------ANAC58                                                                <---------ANAC58                                                               --------->ATHB12                                                              <---------YAB1                                                          <---------YAB1  *TSS  <-----------HVH21             <---------AHL20(2) <---------AHL20(1)                  <------- ------->MYB52(1)                  --------->TOE2(3)     <---------ARR11(3)               <---------ARR11(3) ---->MYB46(1)                  <----------DOF2          --------->AHL20(1)      <----------DOF2 ---->MYB83                  <-----------GT1             --------->ARR11(3) <-----------------AGL1 -----GT1 --------->ZAT6    <<<<<<<<<<GT-3b      ----------->HVH21  --------->ANAC55(2)   --------->ARR11(3)   caaacgttactgtcactaaatgaaatctatttttctttcttaaattttgctctgacaaatatttttgattgcgtcattttctactttggaaatgtctttg  8100400                                                                   --------->ATHB12                                                                   --------->ATHB51                                                                   <--------HAHB4                                                                   -------->HAHB4                                                                   <---------ICU4                                                                   -------->ATHB1                 <--                                                                   --------->YAB1                 ---                                                                   <---------AHL20(2)             ---                                                                  <---------ATHB51                ---                                                                  --------->ICU4                  ---                                                                  <---------YAB1                 <---                                                              <---------MYB52(1)               ------                       --------->TOE2(3)                     ----------->GT1                   <-----              --------->At4g35610      <----------DOF2   --------->GLK1(2)              --------->ANAC58            --------->ZAT14 <-----------ARR10           <---------GLK1(2)               --------->ANAC58            <---------ZAT18<---------CCA1(2) <----------DOF2<---------HSFB2a(2)       --------->CCA1(2) ---DOF2   <---------MYB52(1)   <-----------GT1       ----------->ARR10          ---------->DOF2 ----   atttagcatttcagttcgctcaaaacatcaaatcttaccttctttagctttcacattagattctggtaattattagcacaaaaaaaagataagccagaat  8100500                                                                        --------->HSFB2a(1)                                                                        <---------HSFB2a(1)                                                                        --------->GLK1(1)                                                                       <-----------ARR10                                                                       <---------ARR11(1)                                                                       --------->GLK1(2)                                                                       ------->TEIL                                                                       <---------ARR14(2)                                                                      <---------CCA1(2)                                                                      <---------GLK1(2)                                                              <--------ATHB1                                                              --------->ATHB51            ---------->DOF2                                   <---------ICU4       ------->GAMYB                                          --------->YAB1      --------->MYB46(3)                                      <--------HAHB4<---------DEAR3(1)     --------->ANAC58                                        <---------ATHB51------>NtERF2     --------->ANAC58                                        --------->ICU4<---------LBD16   --------->MYB46(3)                                        --------->AHL20(2)        --------->DEAR3(1) -------ANAC55(2)                                      ------>NtERF2<---------MYB59--------->MYB46(3) ------>ANAC46                                        ----------->HVH21--------->ARR14(2) ------>ANAC58                                        --------->DEAR3(1)<---------GLK1(1)           - ------>ANAC58                                      ------>NtERF2 --------->MYB52(1)<---------ALFIN1< ------>ANAC55(2)     --------->GLK1(1)          ------>NtERF2<------------ATHB5   <---------MYB55(2) ------------------WRI1   <----------DOF2     --------->At4g35610<-----------GT1   --------->DEAR3(2) --->ARR14(2)     <------ZmHOX2a(1)           <---------At4g35610<<<<<<<<<GT-2    --------->SPL7   -- ----ARR14(2)    ----------->GT1         <----------DOF2     <---------ATHB12--------->LBD16     ---- -------------------->ANAC81          <-----------GT1 <---------ETT(1)<---------ARR14(1)        -----   acgaaacaaccaaaaaaagaggagaattcttttttttttttttctttccgatgcctccgaccaataattaccgaatctccggcgaaccaccgtctactac  8100600           --------->DEAR3(1)           --------->DREB2C(2)           --------->ANAC46           ------->GAMYB           --------->RAP2.6(2)                              --------->YAB1         <---------At5g28300                                <---------ICU4        <---------ALFIN1                                   <---------ATHB12       --------->MYB46(3)                                  --------->ICU4 ----->NtERF2                                       <------MYB46(1) -----------HVH21                              ------>ZmHOX2a(1) ------->DEAR3(1)              <---------GLK1(2)    <------MYB83                      ------>ZmHOX2a(1) -->NtERF2--------->MYB46(3)   <---------ARR14(2)  <---------AtMYB61                 ---------------- ---->ANAC46------>NtERF2      --------->ARR14(2) <---------MYB52(1)        <----------DOF2 <--------   gccgtctcatccaccgccaaaaccgaaaacaaggattctctctctattcctcgttggtgtaatcatgttttcaatcttctttctcttcctcgttcttatc  8100700                                                                 <------NtERF2                                                            <---------DEAR3(1)                                                         <---------O2                                                         --------->O2                                                         --------->TGA1a                  --------->At4g35610                                                         <---------bZIP60(1)            <-----------RAV1(2)                                                         --------->bZIP60(1)           ------>ZmHOX2a(1)                                                         <---------TGA1a              --------->TOE2(3)                                                      --------->At1g77200          --------->GLK1(2)                                                      --------->DREB2C(2)          --------->ARR14(2)                                                      --------->DEAR3(1)        --------->ANAC58                                                      --------->DEAR4(1)        --------->ANAC58                                                      ----------->HVH21     <---------RAP2.6(3)                                                      =============MYC_MYB  ------>NtERF2 <---------At4g35610                                                      ------->GAMYB        <---------ETT(1)                                                     --------->MYB46(3)    --------->DEAR3(1)                                                     --------->DEAR3(2)    --------->At1g77200                                                   --------->AtMYB61       --------->DEAR4(1)                                                   --------->DEAR3(1)      --------->RAP2.3(3)                                                   <---------ALFIN1        --------->DREB2C(2)                               ------>ZmHOX2a(1)  --------->MYB46(3)      --------->RAP2.3(1)     --- ----->WRI1                 ------>ZmHOX2a(1) <-----------TGA1<------NtERF2----------->HVH21      <-- -YAB1             ------>ZmHOX2a(1)          <-----------HVH21<---------DEAR3(1)  <---------ARR14(2)   ggtatcgcctctgttcttatcctccctctcctcctctcttctctccatcgtcaccaccgacgtcgtcgtcgtaatcgccgacaagaatcctcagatgggt  8100800  Previous    Next  AGI:  At2g18670.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT4G30370.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64356.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 8100302    to: 8102811    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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