Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->ALFIN1                                           <-------MYC2                                           ------->MYC2                                           <-------PIF5                                           ------->PIF5                                           ------->MYC3                                           <-------MYC3                                           <-------MYC4                                           ------->MYC4                                          <<<<<<<<<<AtMYC2                                          <<<<<<<<<<ABI5                <----------ID1            <<<<<<<<<<HY5             --------->MYB52(1)           --------->O2          --------->ANAC46                ================================bZIP_DOF       ------>ZmHOX2a(2)                  --------->bZIP60(2)      --------->CCA1(2)                   <--------ABF1      <------ZmHOX2a(2)                   ================================bZIP_DOF     <---------ARR11(3)                   --------->ANAC55(2)     --------->ARR11(3)                   <---------TGA1a     <---------AGP1                       <---------ANAC55(2)     --------->ARR14(2)                   <---------O2--------->ANAC58       <----------DOF2     --------->AGP1                  --------->ANAC58 --------->ANAC46     <------NtERF2   ----------->ARR10      <---------ZAT6  --------->TGA1a      ---------->DOF2 ---ZmHOX2a(1)--------->ANAC46       --------->ANAC58 --------->ANAC58  --------->RAP2.6(3)   gagattagatctacacaagggacaagtagagtgagagagaagccacgtgtcgatacactcaacgtgaaaggcatggctgcatttaggcaagagtctaagt  8094800                                                                                         <---------ANAC58                                                                                         <---------O2                                                                                         ============                                                                                         <---------ANAC55(2)                                                                                         <---------ANAC58                                                                                         <---------ANAC46                                                                                         --------->ANAC55(2)                                                                                         <---------ANAC55(1)                                                                                         <---------bZIP60(2)                                                                                         <---------TGA1a                                                                                         --------->TGA1a                                                <---------GLK1(2)                        --------->O2                                                --------->ARR11(3)                     <---------DOF5.7(2)                                               <---------RVE1(1)                      ----------->HVH21                                              ----------->ARR10                     --------->ANAC55(2)                                       ---------->DOF2                              --------->ANAC55(1)                                     --------->YAB1                                 --------->ANAC58                                    <---------ATHB12      --------->DREB2C(2)       <---------ANAC55(2)                                  --------->WOX13(1)     --------->DEAR3(2)         --------->ANAC58<                               <------ZmHOX2a(1)<---------ARR11(3)         ----------->GT1 --------->ALFIN1   ------>ZmHOX2a(1) <----------ID1 <<<<<<<<<ARR2--------->GLK1(2) ------->TEIL     --------->ANAC46<   ttatcctctgtttcaaactcacagagacaaacaggacaatcaaaaggagagattttgagaccgacaatggacttgtaatgaaaaacaggtaacgtgtcga  8094900             ------->GAMYB            --------->ANAC58            --------->ANAC58            --------->ANAC46          <---------DOF5.7(2)         <---------WRKY12         <---------WRKY45         <---------WRKY38(1)        --------->WRKY18(1)       <-----------HVH21      <------MYB46(1)      <------MYB83                           --------->ZAT2     <---------AtMYB61     <---------MYB46(3)--------->At4g35610  <------ZmHOX2a(1)       <---------TOE2(3)  <---------At4g35610  --------->ATHB12   --------->YAB1          <---------ZAT2 ====================MYC_MYB   ---------->DOF2                --------->At5g28300 ---------TOE1(3)    --------->ATHB12    <---------REM1(1)   ----------->GT1 ---------TOE2(3)  --------->GLK1(2)  <---------MYB46(3)   --------->At4g35610            <----------DOF2   ttaaggattggtcaacgccagaatcatggaggttaaagagttgttgaagctggccttgaagagctgtaacattgtcgaagtaatcttctctgctttctct  8095000                                                                        --------->ATHB12                                                                        <---------ICU4                                                                       --------->ICU4                                                                       <---------YAB1            <------ZmHOX2a(1)                                        --------->YAB1         <------ZmHOX2a(1)                                          --------->ICU4     --------->ALFIN1                                          <------ZmHOX2a(1)   <---------ANAC58                                      ------>ZmHOX2a(2)<---------YAB1   <---------ANAC46                                      =============HOX2a_HOX2a                 <--   <---------ANAC58      --------->GLK1(2)           <---------YAB1 <---------YAB1  <---------ARR14(2)   tgatggtgtgaggaggaatttgacaagaatatggagaagaccagagatgaagaagatgatcgagaggattatgattattagaagaatatttggagtgatt  8095100                                                     <---------ANAC46                                                     --------->ALFIN1                              <-                                                     <---------AtMYB61                             --                                                  <---------DEAR3(1)                          -------                                                  --------->ALFIN1                           --------                  <---------ANAC58                <---------AtMYB61                          --------                  <---------ANAC58              <---------MYB46(3)                          <--------                --------->ANAC58               <---------AtMYB61   <------ZmHOX2a(2)        ---------     --------->AHL20(2)                 <---------YAB1<---------MYB46(3)--------->GLK1(2)  <---------LBD16     <---------AHL20(2)    --------->ATHB12    --------->ALFIN1   <---------ARR11(3)     <---------ARR14(2) ---------GT1   --------->ANAC58    ----------->GT1<---------MYB46(3)  <---------GLK1(2) --------->ARR14(2)   ttgctgtttaaatttgacaagcttgtgtttgatttgagaggtatcaatggtggtggtggtgaagaagagatcaaattctgagttgatttcatttccggta  8095200 --------ARR11(3) ------->ARR11(3)          --------->DAG2 -->At5g28300             ---------->DOF2                          <---------YAB1 --->GT1           ----------->GT1                              --------->ICU4 ->LBD16          --------->HSFB2a(2)            <---------At4g35610    <<<<<<<<<<ABI3 -HSFB2a(2)       <---------HSFB2a(2)<----------ID1             <---------YAB1 >HSFB2a(2)      <---------LBD16---------->DOF2  --------->At4g35610    <<<<<<<<<<FUS3          <----   aaatcttgttcatgttttctctggaaaaaaaagtgaaagagaacaaatttgagctcaaaaacagagattattaatgcatgctctgttttctgagagtttt  8095300                                     --------->At4g35610                                --------->CCA1(2)                                                  <-          <------------CBF     --------->ARR11(1)                         --------->ATHB12    <------MYB46(1)        <---------YAB1     ---------->DOF2                               --------->ICU4       <------MYB83  --------->ARR11(3) ----------->GT1 <---------At4g35610                 <---------YAB1     <--------P -----AtMYB61 ---------->DOF2  <---------ARR11(3)        <---------AHL20(2)           <-----------GT1   ggtttatcttgtaattgaaagaagagaaataaagatttgagctcaaagttttttgaaaatttatgagatagagtgatgattaagagaattacaggttgga  8095400                       <---------AHL20(1)                       --------->AHL20(2)            <---------At4g35610            --------->At4g35610          <-----------RAV1(2)           <<<<<<<<<<GT-3b       ----------->HVH21<---------AHL20(2)  --------->YAB1       <---------AHL20(2)          ---------->DOF2         --------->ICU4        <--- -----------CBF        --------->AHL20(1)   <----------DOF2         <----------DOF2     --------->GLK1(2)   ccattgatggtgacagatgagcgaatttatttcagtttatatttttctttcaccaaagaagagagagtctctttgaaatgattttttaaaattctgaaat  8095500                                              ------->GAMYB                                             --------->ANAC58                                             --------->ANAC46                                             --------->ANAC58                                           --------->MYB52(1)                                           <---------DOF5.7(2)                                     ---------->DOF2                                                -                            --------------->AGL15                                                   <                            <---------------AGL15              <---------AHL20(2)             -------                           ----------------->AGL2             --------->AHL20(2)            <--------                     --------->AHL20(2)   <---------WRKY45--------->AHL20(2)              --------->YAB1    --------->ARR14(2)     ----------------->AG         <----------DOF2                <----------DOF2    <---------ARR14(2)   <-----------GT1  <---------WRKY38(1) <---------AHL20(2)   <----------DOF2  - ------AHL20(2)      <---------AHL20(2)   <---------WRKY12<---------AHL20(2)   <---------ATHB12  ----   taatgggatttggaattttgtatttaattaccaaaaatgcaaagtcaacgaaacatttctttaaataaatagactgatacaatcactttctttcatgaat  8095600                                                           ------>MYB46(1)   --------->AHL20(1)                                      ------>MYB83   --------->ARR11(3)                                    --------->MYB46(3)   <---------AHL20(1)                                    --------->AtMYB61   <---------ARR11(3)                                    <---------MYB59  --------->CCA1(1)                                  --------->LBD16        --------->ANAC46  --------->RVE1(1)     ------>MYB46(1)           -------->P            <-----------GT1             < -------->YAB1        --------->AtMYB61           --------->MYB52(1) --------------->AtSPL8        <- ---------ICU4        <---------MYB59             ------>MYB46(1) <---------AHL20(2)              --- -->YAB1             --------->MYB46(3)           ------>MYB83    <---------YAB1        --------->ARR11(3) -YAB1   <---------YAB1 ------>MYB83       ---------->DOF2 --------->MYB52(1)           <---------ARR11(3) -------->AHL20(2) <-----------GT1------>ZmHOX2a(1) ------->GAMYB--------->AHL20(2)--------->AHL20(2) ----->YAB1 <---------YAB1    <-----------HVH21  --------->MYB52(1)  <---------------AtSPL8 <--------   aataatatcttatgatttttgtaaccaaaccctgtccttccatgttaaagccaaccggaccaaacgatataattgtacaatccattttaaaatcttacaa  8095700  Previous    Next  AGI:  At2g18650.1    Description:  MEE16 (maternal effect embryo arrest 16); protein binding / zinc ion binding. Identical to Putative RING-H2 finger protein ATL2C (ATL2C) [Arabidopsis Thaliana] (GB:Q9ZV53); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT4G30400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66564.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71824.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 8093942    to: 8095213    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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