Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         ----------->RAV1(1)                                                  --------->At4g35610                                                  <---------At4g35610                                             <---------ZAT2                                             ======================RAV         --------->YAB1                      ----------->RAV1(2)                                   --        <---------YAB1                       --------->At4g35610                                 <---   --------->YAB1                            --------->ZAT2                                      <---   --------->TOE2(3)                         <---------At4g35610                                 <--- --------->ANAC58                           ------>NtERF2                                     ------- --------->ANAC58                    ====================RAV                           <---------ZAT6 ----->ANAC58                        <-----------RAV1(1)                       --------->DAG2 ------- ----->ANAC58 ----------->GT1  --------->ANAC58   --------->ZAT2              ---------->DOF2 ------- ---->DOF2   <---------TOE2(3) --------->ANAC58   <---------ZAT2         ----------->GT1  --------->CCA1(2)   agcaagcttaattataaggctaaaaacaagagtaagcaaatgttggcacctgagctgcaacagtatgggaacgagttggaaaaagcttagtgatacaagc  8007500                                                               --------->MYB55(1)                                                              --------->MYB46(3)                                                              <---------MYB55(2)                                                              <---------MYB52(2)                                                           --------->REM1(1)                                                    --------->ZAT2                                                    --------->At4g35610                                                    <---------At4g35610                                                    <---------ZAT2                                                  <---------ALFIN1                                               --------->AtMYB61     <-----------GT1                           --------->DEAR3(1) --------->RAP2.6(2)        <------- --------->GT1                                 <---------ALFIN1------->GAMYB                 -------- ------ANAC58                                ----------->RAV1(1)  ------->GAMYB           ------>ZmHOX2a(2) ------ANAC58                               <---------ALFIN1  <---------MYB111(2)        <------ZmHOX2a(2) ------ANAC46              <-----------RAV1(1)--------->MYB46(3)-------->P         ------>ZmHOX2a(2) -->ANAC58              ------>ZmHOX2a(1)  <---------ZAT2------>ZmHOX2a(1)       <---------ARR11(3) - -->ANAC46      --------->YAB1             --------->ZAT2=================================HOX2a_HOX2a -->ANAC58     <---------YAB1  <---------At4g35610--------->MYB46(3)             --------->ARR11(3)<-   cgtgttaaaaccatgctctgataatcctattgctgctcttagcccagcaccaccagctcctacaacaaccgcatcatatgtatgatctacgatcgtatac  8007600                                                          --------->ANAC58                                                      ------>MYB83         ----------->RAV1(2)                          ------>MYB46(1)         --------->At4g35610                       --------->MYB46(3)         =========================RAV            ------>MYB83     <-----------GT1                             ------>MYB46(1) --ARR14(2)    <----------DOF2                 --------->AtMYB61  --------->YAB1 ->ARR14(2) ------>NtERF2---------->DOF2       <---------MYB59  <---------ARR11(3) -------->ATHB12      ----------->RAV1(1)--------->YAB1   --------->ANAC58 --------YAB1 <---------DAG2            <---------ATHB12  --------->ANAC46                     ------   gatgatttatcccctgcctttttccaacaaagaacacaacaaatcaaaaccaaaccaactacgcaaaatcataccaaaaattgtgttctaatcgaaacaa  8007700                          <---------YAB1                                                          <--                        --------->YAB1                                                            ---                       --------->ICU4                                                   <---------At4g35610                   --------->AHL20(2)                                                   <---------ZAT2                  <---------ATHB12                                                      --------->ZAT2              --------->MYB46(3)                                                      <------ZmHOX2a(1)             --------->ANAC58                                                       --------->ALFIN1             --------->ANAC58                                                      <------ZmHOX2a(1)            --------->WOX13(1)                                               --------->DEAR3(2)   ---           <---------WRKY38(1)                          <---------YAB1      --------->SPL7       <--- ---->DOF2--------->WRKY18(1)        ---------->DOF2<------ZmHOX2a(2)     <---------SPL7--------->At4g35610   agctagaaattagtcaaccaatgaaatgatgagaaaccccaaagactaaacgagatcgatgattcaaacaatgtctcgtaccgaaggaggagctgagaag  8007800                                                                             <---------ALFIN1                                                                             --------->REM1(1)                                                                             --------->O2                                                                             --------->bZIP60(2)                                                                           <---------ALFIN1                                                                           ----------->RAV1(1)                                                                         <-----------HVH21                                                        --------->ANAC58 --------->ABI4(1)                                                        --------->ANAC58 ------>NtERF2                                                        --------->ANAC46--------->DREB2C(2)                                                      ------>NtERF2     --------->DEAR3(1)                                                     <---------DEAR3(1) --------->ANAC46                                                  --------->DEAR3(1)    --------->ANAC58                                              --------->HSFB2a(2)       --------->ANAC58                                              ------>ZmHOX2a(1)        --------->ERF1   <---------ZAT18                                              <---------HSFB2a(2)      --------->ATERF1(1)                                          ------>ZmHOX2a(2)            --------->DEAR4(2)                                         <---------GLK1(1)             <------NtERF2    --------->ZAT14                                         --------->GLK1(1)             --------->MYB46(3)                                         <------ZmHOX2a(2)             --------->RAP2.3(1) -------ARR14(2)                        --------->ARR14(2)             --------->DEAR3(2) ------>ARR14(2)                   --------->GLK1(2) --------->DEAR3(1)--------->ORA47(2) ------>GLK1(2)      ---------->DOF2    <---------ARR14(2)            <---------ATERF1(1)       ----- ------GLK1(2)     <---------YAB1 <---------GLK1(2)------>NtERF2    <---------ABI4(2) *TSS   --------   aatctggagagttgagaagtgatgaaagcgccattagattccgatctcctcgacgacgacgcaactcgaaggcaccgccacatctctccgtccactactc  8007900               --------------->AGL15                     --------->ARR11(3)               <---------------AGL15                     <---------GLK1(2)              ----------------->AGL2                     <---------ARR11(3)              <-----------------AGL3                   <---------TOE1(3)    ------->TEIL                                   <----------DOF2     <---------At4g35610 --------->ANAC58                            <------------CBF          --------->At4g35610 --------->ANAC58                         <---------AHL20(2)          ------->TEIL ---->ANAC46  ----------------->AG        --------->AHL20(2)       <---------REM1(1)              <-- ->ZAT14      ----------------->AGL3  <-----------TBP  <---------TOE2(3)                    ---------   accacgaacttgttaacccaaaaatggaagaagagtcgttttatataaattggctttaagattttgaaaatgtagctgcaaaatttcgaaattgccacta  8008000                                  ----------->GT1                                    --------->LBD16                                  <------MYB83                                     <---------LBD16                           ----------------->AGL1                                <---------ALFIN1                        ------->MYC2                                             --------->REM1(1)                        ------->MYC3                                            --------->ZAT14   ---                        <-------MYC3        --------->GLK1(2)                   <---------ZAT14 -----         --------->HSFB2a(2)      <------MYB46(1)                              <---------ALFIN1 ----- -------AGP1            <-------MYC2   ---------->DOF2                <---------ARR14(2) --------->MYB52(1) >ZAT6   <---------HSFB2a(2)     --------->MYB59        <-------TEIL  --------->ARR14(2) <---------DOF5.7(2)   gacctggtttacgagaagtctctcaacgtgccaatttggtataaagaatttgaaaatgttcatgaaattccaaatttgcccctacaccgggtaacgaagt  8008100                             <---------O2                             --------->TGA1a                             --------->O2                           <---------ALFIN1                        --------->ANAC46     <---------TOE2(1)                        --------->ANAC58     <---------TOE1(1)                        --------->ANAC58    --------->SPL7                    ===================MYC_MYB                    ------->GAMYB         --------->TOE1(2)                   --------->ANAC46       <---------SPL7                <---------WRKY45         <---------ANAC58                <---------WRKY12         <---------ANAC58                <---------WRKY38(1)     --------------->AtSPL3               --------->WRKY18(1)   --------->ATHB12                                           -----    <---------ICU4 --------->ANAC58  <---------HSFC1(2)                                       -------   --------->ICU4  --------->ANAC58  <---------HSFB2a(1)             <---------ANAC46         <------ -------->GT1 <-----------HVH21     <---------YAB1                   ----------->GT1          ------- ------>GT1  ------->GAMYB ----------->RAV1(1)          --------->YAB1      ---------->DOF2   <------ ---->ALFIN1 ==========================MYC_MYB   ------>NtERF2--------->AHL20(2)       <-----------RAV1(1)   gtgtaaaaatttcaacggtcaacgaaacgccacatcggatgattcgtacgaggcccatttataagtaaatggggtttataaagcccataatgttgcagca  8008200                                                                                  <------NtERF2                                                                                 --------->LBD16                                                                                <---------ANAC46                                                                             --------->O2                                                                        --------->bZIP60(2)                                                                        --------->ANAC55(1)                                                                        <---------ANAC55(2)                                                                        --------->ANAC46                                                                        --------->ANAC58                                                                        --------->ANAC58                                                             <---------MYB52(1)<---------LBD16                                                            ===========================MYC_MYB                                                            <-------GAMYB    <---------O2                                                            ======================MYC_MYB                                                           --------->MYB52(2)--------->ANAC58                                                           <---------MYB46(3)--------->TGA1a                                                          <-------TEIL  --------->ANAC55(2)                                                       <---------DEAR3(2)    --------->ANAC58                                                       --------->HSFC1(2)    --------->ANAC46                                                       <---------HSFB2a(1)   <---------TGA1a                                                       <---------HSFC1(2)<-----------HVH21                                                       <------MYB46(1)  --------->bZIP60(1)                                                       <------MYB83     <---------TGA1a                                  ----------->HVH21    --------->HSFB2a(1)----------->HVH21                                <---------AtLEC2      --------->MYB111(1)<-----------TGA1                               <-------TEIL           --------->MYB59   <---------bZIP60(1)                           --------->ARR14(2)         --------->MYB46(2)<---------O2                           <---------ARR14(2)        <---------MYB55(1) --------->O2 ------>GT1            --------->At4g35610           <--------P  <---------ZAT18--------->DEAR3(1)  < -->ZAT2               <---------At4g35610           =============================MYC_MYB          <- ---ZAT2  <---------MYB52(1)--------->GLK1(1)        ==================================MYC_MYB     -- -->At4g35610         ----------->RAV1(1)           <---------MYB52(1)  --------->TGA1a           --- ---At4g35610       --------->At4g35610          <-----------RAV1(2)  <-------------DYT1    ---------   gtgaaatacttcggtatgcattagcagcagaaatgcatgacactcttaacttcaggtaggttcgttgctcactcacgtcacgccggagaagacacatcgg  8008300 <----------ID1 <---------ETT(2)                                      <----------DOF2                   --------->CCA1(2) ------ZmHOX2a(2)                                   <-----------GT1                   <---------TOE2(3) --------ARR14(2)                                <---------ZAT6                  --------->ALFIN1 ------->ARR14(2)                            --------->ZAT14                  ------>ZmHOX2a(2) ------>GLK1(1)                              <---------ZAT14                 <------ZmHOX2a(2) >MYB52(1)                      ------------>CBF ----------->GT1  --------->GLK1(2)   ----------->ARR10   agatcgacaaatcgattcagagagagagagagatagcaattttcttctgtagtgttactttctgagagagtctggagagatcggtgttgagatttgggta  8008400  Previous    Next  AGI:  At2g18450.1    Description:  SDH1-2 (Succinate dehydrogenase 1-2). Identical to Succinate dehydrogenase [ubiquinone] flavoprotein subunit 2, mitochondrial precursor (SDH1-2) [Arabidopsis Thaliana] (GB:Q9ZPX5); similar to SDH1-1 (Succinate dehydrogenase 1-1) [Arabidopsis thaliana] (TAIR:AT5G66760.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ54899.1); similar to hypothetical protein OsJ_022096 [Oryza sativa (japonica cultivar-group)] (GB:EAZ38613.1); similar to hypothetical protein OsI_023919 [Oryza sativa (indica cultivar-group)] (GB:EAZ02687.1); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPr Range:  from: 8004474    to: 8007886    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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