Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <---------ZAT14                                     <---------ZAT18                                     --------->ZAT14                                     --------->ZAT18             --------->At5g28300   --------->LBD16    <---------At4g35610           <---------ANAC58    --------->At4g35610           <---------ANAC58            ----------->GT1 ----------CDC5    <-------TEIL   <---------ANAC46           --------->ANAC46       --------->TOE2(3) --->TOE1(2)----------->GT1   <----------DOF2              --------->MYB52(1)--------->LBD16   gcgatgagctaacacagtaaatacgtcgaacactttccgtgcactatttcaagaacaatataaacggaaataaaaactccagataacctcatttacaaga  7997400                           --------------->AGL15                                         --------->ARR14(2)                           <---------------AGL15                                         ---------->DOF2                          ----------------->AGL2                                         <---------ARR14(2)                          ----------------->AGL3                                     <---------LBD16                          ----------------->AGL1                                    --------->MYB52(1)          --------->HSFB2a(2)                                                     ---------->DOF2          <---------HSFB2a(2)                                                 --------->YAB1      >>> ----------->GT1    ------->TEIL    ---------->DOF2                       <-------TEIL<---------ANAC46   acatggtgacttctggactatgaacatcgccaaaatgagaaagaaaacaaaaatgttcgatactatttctaagtgattcatcaaaatagcggaaagggaa  7997500                                                                                                   --                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                            ------>NtERF2                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                           <---------ATERF1(2)                                                                                           --------->ATERF1(2)                                                                                           <---------RAP2.3(2)                                                                                          --------->ATERF1(1)                                                                             <---------ARR14(2) <----                                                                             --------->ARR14(2) <----                                                                           ------>NtERF2  <---------LBD16                                                                           <---------RAP2.3(1)  <----                                                                           <<<<<<<<<AtERF-4--------->DEAR3(1)                                                                           <<<<<<<<<AtERF-3<---------DEAR3(1)                                     ----------->GT1                      <---------RAP2.3(3)--------                                 <------ZmHOX2a(1)     <---------GLK1(1)  <---------RAP2.6(2)<-------                               <---------TOE2(3)  <---------ANAC58        <---------DEAR3(1)---------                               <---------------AtSPL8  --------->GLK1(1)  <---------RAP2.3(2)<------NtERF2       --------->ARR11(3)      --------->ANAC46   <---------ANAC58       --------->RAP2.6(3)<--------       <---------ARR11(3)  --------->YAB1      <----------DOF2      ------->TEIL   <---------DAG2<--- >>>>>>>>>TBF1        ==================HOX2a_HOX2a  --------->ATHB12  ----------->HVH21 <---------RAP2.3(1) >>>>>>TBF1           <------ZmHOX2a(2)    <-----------GT1       <---------YAB1    <----------DOF2<--   gaagaagaagatagtgagtgagagatcgattataaggaacagttaatacctttcttgatttccgacgatgaatgtgacggctctgctttttcgccggcgg  7997600    <------ZmHOX2a(2)   <---------ARR11(3)   <---------AGP1 ---->ZmHOX2a(2) --------ARR10 ----->GLK1(2) ----->ARR14(2) ----->ARR11(3) ------AGP1 -ATERF1(1) -ORA47(2) -ERF1                                                                        <---------TOE1(3) -----ARR14(1)                                                                <---------TOE2(3) --NtERF2                                                                    <---------DOF5.7(2) -----CCA1(2)                                            <---------------------WRI1 ->ATERF1(1)              <-----------GT1                <---------HSFB2a(2)--------->WRKY12 --LBD16             ----------->GT1                     --------->HSFB2a(2)----------->HVH21 >LBD16              <---------ANAC46             <---------MYB52(1)       <---------WOX13(1) -RAP2.3(1)        --------->LBD16              <---------ANAC58    *TSS <---------MYB46(3) ------ARR14(2)    ------>NtERF2                <---------ANAC58    ---------->DOF2  <-----------GT1- ----ZmHOX2a(2)  <---------LBD16    ------>ZmHOX2a(1) <----------DOF2   --------->ALFIN1           --   atctagatcagtctccaactccggcgtaaaaccttctccttctcttaatttcgtttctttgagaagcatacaaagtggttgacgttttatccatgttaaa  7997700                                                                --------->DAG2              --------->KAN4(2)                                ---------->DOF2        <---------DAG2 --------->ANAC58                                           --------->YAB1         <-----------GT1 --------->ANAC46                                  <---------ZAT18                <-----------GT1 --------->ANAC58                                  --------->ZAT18            <---------DAG2 -------->RAP2.6(3)                               --------->ALFIN1     ---------->DOF2<----------DOF2 ------->MYB52(1)  ------>ZmHOX2a(1)     ---------->DOF2 --------->REM1(1)    <----------DOF2   aaaacggcacgatgtttattcctccaacgagtgtttctttgaacaaagcccagtgggctacatcataaagcccaaaagccctttttaacttttcgatgtt  7997800                    <---------LBD16                  <---------WRKY18(1)                 ----------->HVH21                 --------->WRKY38(1)              <----------DOF2      --------->GLK1(2)                                <---------ANAC46            <----------DOF2    <---------HSFB2a(2)   --------->ARR14(2)            <------NtERF2          ------>NtERF2        --------->HSFB2a(2)   <---------ARR14(2)       <---------AtMYB61         --------->DEAR3(1) *TSS  <---------GLK1(2) <------NtERF2             --------->ALFIN1      <---------DEAR3(1)   --------->ZAT18        <---------ANAC46   --------->At4g35610      --------->ANAC46     --------->At4g35610   <---------LBD16     <---------At4g35610           --     ------>ZmHOX2a(1)--------->LBD16     <<<<<<<<<<<<<<<<<LFY    ---------->DOF2<---------DEAR3(1)--   ttgtttcctcgccgctcttttgaccggagagctctagaatctctcaacaatggcggaatcgattttcagaaagctcagagatggtggcgaagaaggcgaa  7997900                                      <----------DOF2      --------->ZAT2                 <---------DAG2      <---------ZAT2              <-----------------AGL1      <---------At4g35610      <---------ANAC58      --------->At4g35610      <---------ANAC58             --------->GLK1(1)    <---------ALFIN1          <---------At4g35610        --------->LBD16                        ----- ------->ANAC58               --------->At4g35610        ------>NtERF2                       <------- ------->ANAC58        --------->GLK1(2)               <---------LBD16                       --------   ctcgcaccagctctcactatagaagaaactgtagcttcccctttcggactcgatgtctccggctatcttctcacaaatctatcttcttcaattttagctg  7998000               --------->ZAT14               --------->ARR14(2)       <-----------HVH21      --------->ANAC46      --------->O2     ------>ZmHOX2a(1) --------->ARR11(3) <---------ARR11(3) --------->ARR14(2)        --------->TOE1(3)                                                     ---- <---------ARR14(2)        --------->TOE2(3)                   <---------ICU4             <----------DOF2 ------>GT1    <---------ZAT18                           <---------ANAC58           <-----------GT1 --At4g35610   <---------ARR14(2)                        <---------ANAC58          <-----------GT1 <- ->At4g35610   <---------ZAT14                  ------>ZmHOX2a(2)     ---------->DOF2  <---------ALFIN1   gaaaatcctcgtcgcagtatactcttaaaccctaattcttctatattcgatctccaattgcttcattactgctaaagtcttcgtttttcccactttgcga  7998100                                   <---------MYB52(1)                               ------>NtERF2                              <---------ARR14(2)                              --------->DEAR3(1)                             --------->ATERF1(1)      <---------ANAC58       <------NtERF2                      --------->DAG2      <---------ANAC58      --------->LBD16                    ---------->DOF2 ----->GLK1(2)            <---------LBD16              <---------REM1(1) ----------RAV1(2)  <---------GLK1(2)               <---------MYB46(3)   <---------MYB52(1)       ---   ttcaggggtcttgtgttgatcacattctcgcggagcccttcgttctatttgcaattgttgaagcaaaaaggaatcgttgtctcttcatcttctaaatggt  7998200                            <---------ANAC58                            <---------ANAC58                            <---------ANAC46                                                        <                           --------->STY1(2)                                                      ---                 <---------ICU4                                                                   <--      <------MYB83         <---------ZAT2                                                         <--      <------MYB46(1)      <---------STY1(2) <---------WOX13(1)         --------->YAB1           <---     --------->MYB59     ------>ZmHOX2a(1) --------->ATHB12      --------->ANAC55(2)    --------->ATHB12     <---------TOE2(3)<---------YAB1      <---------YAB1       <---------YAB1          <---------YAB1 -------->GT1   --------->ICU4     <---------ANAC46     <---------At5g28300  <---------YAB1      ====   gagttattaggttttctaaatattatcctagcttgtggagtagtttgattgctcgaatcactgtgatacttgtttgataacaattggttttgatttgaag  7998300  Previous    Next  AGI:  At2g18400.1    Description:  ribosomal protein L6 family protein. similar to EMB2394 (EMBRYO DEFECTIVE 2394), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT1G05190.1); similar to unknown [Populus trichocarpa] (GB:ABK94593.1); contains InterPro domain Ribosomal protein L6, conserved site-1; (InterPro:IPR002358); contains InterPro domain Ribosomal protein L6; (InterPro:IPR000702) Range:  from: 7996558    to: 7997668    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g18410.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK94526.1) Range:  from: 7997828    to: 7999856    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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