Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->bZIP60(2)                     <---------ANAC46                     --------->O2                    <------NtERF2                    --------->LBD16                   --------->DEAR3(1)                <---------DEAR3(1)        <---------LBD16       --------->MYB52(1)      <---------ALFIN1                                     --------->LBD16     --------->ETT(2)<---------O2                         --------->ANAC46     --------->ZAT18------>NtERF2                         --------->LBD16 <-------MYC3<---------ZAT2                              --------->LBD16               --------->ARR11(3) ------->MYC3--------->At4g35610                         <---------LBD16               <---------ARR11(3) -------->O2 <---------At4g35610                   <---------ANAC58              <---------ANAC58 -->ETT(2)   --------->ZAT2                        <---------ANAC58              <---------ANAC46 ---ETT(2)  <-----------ARR10                  <---------ANAC58                  <---------ANAC58 --AtMYB77--------->LBD16    <----------DOF2   <---------ANAC58            ------>NtERF2 ------>ZmHOX2a(2)   caacgtgtccaccggagctcgccgcgtgattcttttggcattctctataccttgccttccccggagaagtagtttgaggcctagcgtatgatcttggagc  7978800                                         ------>ZmHOX2a(2)                                        <------ZmHOX2a(2)                                       --------->ARR14(2)                                       <---------ARR14(2)                                     --------->LBD16                                   ------>ZmHOX2a(2)                                   <---------LBD16                                  <------ZmHOX2a(2)                                 <---------ARR14(2)                                 --------->ARR14(2)                               --------->LBD16                             <---------LBD16                          <------MYB83                             ------>ZmHOX2a(2)                        <------MYB46(1)                            --------->CCA1(2)                        <---------MYB46(3)  --------->ALFIN1                            --------->ARR14(1)         <---------MYB52(1)               <-------GAMYB                            <------ZmHOX2a(2)          <---------CCA1(2)<---------GLK1(1)<---------ARR14(2)                           --------->AGP1<---------LBD16<---------ARR11(1)             <---------MYB46(3)                           --------->ARR11(1)   <---------ETT(1)    <---------ANAC46   <---------DEAR3(2)                           --------->ARR14(3)   ----------->HVH21 <---------MYB46(3)  <---------ANAC46                           <---------ARR14(3)  --------->SPL7 <-----------RAV1(1)     <---------RAP2.6(2)                           <---------ARR11(3)  --------->DEAR3(2) --------->MYB55(2)  <---------DEAR3(1)                <--------P --------->ARR14(2)<---------ARR14(2)  --------->ALFIN1    <------NtERF2   --------->CCA1(2)       <---------ARR14(2)<-----------HVH21<---------AtMYB61 <-----------RAV1(1)  --------->ARR11(3)       --------->ARR11(3)--------->ARR14(2)  <---------AtMYB61 <---------DEAR3(1)  <---------ARR11(3)     ----------->ARR10 --------->LBD16 <----------DOF2    <----------DOF2      <-   atgagatatagaaattgggttagtatcaagatccggatccggatccgggtccgacccgtttcttttggtggtgggtttctctttgttggcggtttgggag  7978900                              --------->At4g35610          <------ZmHOX2a(1)   <---------At4g35610          ======================HOX2a_HOX2a    --------->SPL7           <---------AGP1    <---------LBD16      ------>ZmHOX2a(2)  <---------ZAT14      <---------ARR11(3)  --------->ZAT18    <---------YAB1                 <---------At4g35610                            --  <---------SPL7   --------->YAB1       <-----------GT1                                          <---  --------->ZAT14 --------->ICU4   <---------YAB1   --------->At4g35610                          ---- -----------------SPL14--------->ARR11(3)       <-----------HVH21   <----------DOF2       <----------DOF2   taagtgtacggaggaagacgatgatgatctagagctgatgattttcttcttgtcatctccattttctcatctttcttctctctaacttccatcttttctg  7979000          --------------->AGL15          <---------------AGL15      <---------DAG2        --------->At4g35610          <----------DOF2     <---------HSFC1(2)           <-----------GT1     --------->HSFC1(2)       --------->AHL20(1) ---->ZmHOX2a(2)        --------->TOE1(3)                                                          <- ------ARR11(3)         --------->TOE2(3)                                                  --------->ANAC58 ----->ARR11(3)---------->DOF2<---------AHL20(1)      --------->TOE2(3)                    --------->ANAC58   atcttgaagcttctgaataaagaaaaccctaatatataacttttctcttaaacaaacattaaaactttcttagtaatctctctccaaaaccctaagctat  7979100               <---------ICU4                                   --------->ARR11(3)               --------->YAB1                                   <---------ARR11(3)            --------->YAB1                                     --------->CCA1(1)            <---------ICU4                                     --------->RVE1(1)           --------->ICU4 <---------GLK1(2)                    *TSS           <---------ATHB12                                <---------YAB1     <---------TOE2(3)   <---------At4g35610             ----------->GT1    ---------->DOF2  <----------DOF2                    <---------YAB1              --------->TOE2(3) --------YAB1 <---------YAB1   --------->YAB1           ----------->GT1          <-----------GT1   tttgattaaagaaatcatcatagctttagcttctcataaacctatagagaaaatgaagatgataaatatctcttccaaagttgaaacctttttaaaaatt  7979200                                      ------>MYB83                                      ------>MYB46(1)                    ---------->DOF2                                      -------->P                        <---------AHL20(2)                                    --------->TOE1(2)                   --------->AHL20(2)                              --------->AtMYB61              --------->ANAC58                 -------                          --------->ZAT18                    --------->ANAC46              <---------        <----------DOF2   <---------ZAT18                    --------->ANAC58            <---------MYB59  <----------DOF2  <---------ZAT6   --------->TOE2(2)     <---------REM1(2)  ----------->GT1-------->P   ttgactttgacttttgtattagtgatagcccaccaaaacctactagactaatctcaagtctacaagcaactaaattaaaggggaaaacttatctaacccc  7979300                         ---------->DOF2                    --------->AHL20(2)     --------->MYB52(1)                  ----------->GT1     <---------MYB52(1)                ---------->DOF2      <-------GAMYB             --------->ANAC58       ----------->GT1             --------->ANAC58       <---------MYB46(3)                                    <---------HSFB2a(2)          <------ZmHOX2a(2)     <---------AtMYB61              <------ZmHOX2a(1)          --------->HSFB2a(2) >GAMYB  --------->ARR11(3)     --------->MYB59   ---------->DOF2                         --------->HSFC1(1) --GT1   ------------------------>ANAC81 <---------YAB1  ---------->DOF2               ------>ZmHOX2a(1)   atttaagaagagatcaagaaaagaaaataaagtttaggtcgttactaatggagaaagagaaaagaggagagaagaagacactattggtccttctagagag  7979400                                                                                                <----                                                                             <------MYB46(1)    -----                                                                             <------MYB83      ------                                                                            <---------AtMYB61  <-----                                                                        <------MYB83         <-------                                                                    <---------O2             --------                                                   --------->ARR11(3)   <------MYB46(1)     <--------                                                   --------->GLK1(2)<---------TGA1a       --------->YAB1                                                   <---------ARR11(3) --------->ALFIN1   <---------ATHB51                   ------>ZmHOX2a(1)              --------->RVE1(1) --------->O2 <---------DEAR3(2)        --------->GLK1(2)                 ----------->GT1     <------ZmHOX2a(1) <---------DEAR3(1)        <---------ARR14(2)           --------->LBD16     <---------ATHB12   --------->MYB59 ---------       <---------GLK1(2)    <---------ATHB12    --------->AHL20(2)  --------->TGA1a      <---------ATHB12   agaattagagaatcgtgtttcctattgcccatcaatttccgagagagaaaaaaaatctaatgaaggagccaagtgggtttggtctgtgccaataataata  7979500 -----ICU4                                                                                     <----- ---->YAB1                                                           <-------MYC3              <<<<<< --->ICU4                                              <---------At4g35610                    <------NtERF2 ----YAB1                                     <---------ZAT18        ------->MYC3             <------ --ICU4<---------ZAT14                        --------->ZAT18       --------->O2              ------- ->YAB1<---------ZAT18              ----------->GT1    --------->At4g35610                <---------ARR14(2) -YAB1 --------->ZAT18            ---------->DOF2  <---------REM1(1)<---------O2          --------->ARR14(2) >ICU4 --------->ZAT14 --------->CCA1(2)  --------->ARR11(3)      <---------ALFIN1--------->YAB1   ataacacagtccactaagaaacaagagatggagagagaaagtaagatgtggacttgtagcagacagtgccacgttgtttctctatcatacagtgtccgca  7979600                                                       --------->ARR11(3)                      --------->ATHB12           --------->AHL20(2)                     <---------AHL20(2)       --------->YAB1   ---------->ID1  --------------->AGL15      -------->HAHB4 <---------MYB46(3)<---------------AGL15     --------->ICU4 ----ALFIN1        <----------DOF2<---------TOE2(3)    <---------ARR11(3)                  <---------ZAT14 <<<<<<<<<<<LFY   <-----------------AGL3     <---------YAB1                              <---------YAB1 ---At4g35610     <-----------------AGL2     ----------->GT1 <---------ZAT6            --------->YAB1 -->LBD16      <----------DOF2  <---------AHL20(2)<---------AHL20(2)                  --------->ICU4   cattggtcgcaatacatctttcttttattggtttttaatgttgagtaatgataaaattatcttgtgttaattaagtcgaatgtcaacaattagtatagtt  7979700  Previous    Next  AGI:  At2g18350.1    Description:  ATHB24 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 24); DNA binding / transcription factor. similar to ATHB33 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 33), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G75240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22836.1); contains InterPro domain Homeobox domain, ZF-HD class (InterPro:IPR006455); contains InterPro domain ZF-HD homeobox protein Cys/His-rich dimerisation region (InterPro:IPR006456); contains InterPro domain Homeodomain-related; (InterPro:IPR012287) Range:  from: 7978099    to: 7979163    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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