Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           --------->ARR14(2)                                                                         <---------ARR14(2)                                ------>ZmHOX2a(2)                     --------->MYB46(3)                              --------->ARR11(3)                    --------->MYB52(1)        ---------->DOF2       <---------ARR11(3)                 --------->ANAC46   tgtctcaaaacaaagtttttatccaaaattttgatcttacaaacctctggttttctcttgttcttcaaggcaacggctctggtttcttcaccggtcttca  7961200             <---------ARR14(2)   <---------At4g35610             --------->ARR14(2)   <---------ZAT2                  <------ZmHOX2a(1)      <------MYB46(1)     >>>>>>>>>>>>>>>>>LFY         <------NtERF2              --------->ALFIN1            <------MYB83    --------->TOE2(3)             --------->At4g35610   <-------TEIL --------->AtMYB61  --------->MYB59   acaaaacctccattgtatccacaggttccatatggcagctacttgttcttgaaatggattcatgtggaggaccaaaacccatgttatagtttggtccaaa  7961300                                                                                                  <--        <---------ATHB12                                                                         <---       --------->ANAC46                                <---------ANAC58                        ------       --------->ANAC58                                <---------ANAC46                        <-----       --------->ANAC58                                <---------ANAC58                 <---------At4g35610   <------ZmHOX2a(2)                              <-----------RAV1(1)     --------->At4g35610  ------   --------->CCA1(2)                             <---------YAB1          <---------ARR14(2)    ------  <-----------ARR10                            <---------ICU4            --------->ARR14(2)    <-----  --------->ARR14(2)                           --------->ATHB12          --------->GLK1(2)    -------  <---------ARR14(2)                          <---------YAB1 --------->AtLEC2           ----------->GT1  <---------ARR11(3)                   --------->MYB46(3)  <---------AtLEC2             --------->At4g35610  --------->AGP1     --------->At4g35610      --------->ICU4 --------->ANAC46         <-----------RAV1(2)   accagatccaagcatttgaaattggctgaaactactctccaacaactcatcattgttgcttccatggaactgaagtatctgaagaagttcaggtgaatta  7961400                                           <---------SPL7 ---------GT1                             <---------REM1(1)                                         < ------YAB1                      <-----------RAV1(1)                                                < --->ATHB51                      <---------MYB46(3)                                              <--- ---HAHB4                <-------GAMYB  <-------GAMYB             --------->ZAT14             ------- --->YAB1                <---------At4g35610                      <-------TEIL                ------- -->ATHB1         <-----------RAV1(1)  <-----------RAV1(1)    <---------------AtSPL8      <------ZmHOX2a(1) ----ICU4  --------->ANAC58    <-------GAMYB ------->TEIL <----------DOF2                <----------ID1 -->ICU4   --------->ANAC58   <-----------RAV1(1)    <-----------GT1                    <---------TOE2(3)   ttactgctatgggacacaacttgttgcagttgctgttgttgctgttgtacccatttaagcctttcaagtacagacatgtccatagagtttaaggacaagc  7961500                    ----------->RAV1(1)             --------->ARR14(3)             <---------ARR14(3)             --------->ARR11(3)          --------->ARR11(3)       --------->CCA1(2)                 <---------ARR11(3)      <----------ARF1                   <---------GLK1(1)      ---------->DOF2 ---------ANAC58 ------>MYB46(1)        --------->GLK1(1)  <----------DOF2 ---------ANAC58 ------>MYB83      <---------At4g35610    ------>ZmHOX2a(2)   <----------ID1 -------DOF2 <---------ARR11(3)    --------->ZAT14      --------->ARR11(3)  --------->DAG2          - -->ANAC58 --------->ANAC58        <---------ZAT14      <---------ARR11(3) ---------->DOF2          < -->ANAC58 --------->ANAC58        --------->At4g35610<---------YAB1     --------->AtMYB61         --   tttcttgagagacaagaccttccaacatattgttctctgcagaaatctttcaacttatgatcttttaaagtgagaccaaaagtacaaaacaaaatagaga  7961600                                        ---------->DOF2                                           <--                                   ----------->GT1                                              xxxxx                                   <------MYB46(1)           <---------YAB1                 ---------                                   <------MYB83       --------->GLK1(1)                     <--------                                  <---------MYB46(3)  <---------GLK1(1)                     ---------                                 <---------ANAC46    --------->ARR14(2)               --------->MYB59 ---------->GT1                <------MYB46(1)      <------ZmHOX2a(1)                 <---------TOE1(3) ----------ID1 --------->DAG2  <------MYB83   ---------->DOF2----------->TBP          <---------TOE2(3) --------->GT1---------->DOF2 --------->MYB111(1)*TSS<---------ARR14(2)            --------->CCA1(2)   atgggaaaaaatgcaaaaaagctctgagttatttggtgggtttaaagcaaaagaggatttgctataaatgtatgaagaagtagagatttaggttatgtaa  7961700                      ---------->DOF2                 --------------->AGL15                 ========================================================================MADS_MADS                 <---------------AGL15                <---------ANAC58                <---------ANAC58             <--------P            <-------GAMYB           --------->MYB55(2)           <------MYB46(1)           <------MYB83          --------->ALFIN1          <---------AtMYB61        <---------ANAC58                                                 --------------->AGL15     <-        <---------ANAC46                                                 <----------DOF2    ---------        <---------ANAC58                                                <-----------------AGL3   <--- ----------CBF  <---------ANAC46                                        ============================= xxxxxxxxxxxxxxx>smallRNA(le3)                                <---------YAB1                --------- >ANAC55(2)<---------MYB46(3)                               <---------ICU4             ----------->RAV1(1) -ANAC55(2)--------->MYB52(2)                              <---------ATHB12--------->AHL20(2)<------- -->GT1<---------MYB46(3)    ---------->DOF2               --------->ICU4<---------------AGL15   ----   tattgtttttgggtggttgcttaaaaaagatgaaagagttgggagaaactaatccattgaaatcattcttcttagctttaaatagaaaacaacattgacc  7961800                                               <---------------AGL15       --------->DAG2                          <---------YAB1   --------->ANAC46                    <-----------GT1 --------ALFIN1                   <---------AHL20(2) >WRKY12                          --------->AHL20(2)                                              <-- ------ALFIN1                 <---------AHL20(2)                                                  --- ==============================================================MADS_MADS                    --------- >WRKY38(1)            <---------TOE1(2)   <----------DOF2                                  <-------- --WRKY18(1)   <---------ALFIN1   <---------AHL20(1)                --------->ANAC55(2)     --------- ------->RAV1(1)       <---------TOE2(2)  --------->TOE2(3)       <---------AHL20(2)        <--------   cacacacataaggtcccctacttcttatgtttttattttattttcctttataaatgtagaaatttcatttacttatttgttatctcttacctctctagaa  7961900                                                                               <---------AHL20(1)                                                                 --------->ARR14(2)                                            --------->ANAC58     ------->TEIL  --------->AHL20(1)                                            --------->ANAC58  --------->ANAC46 --------->ARR11(3)                                            --------->ANAC46  --------->ANAC55(1)                                            --------->ANAC55(1) <---------CCA1(2)                                  <-------MYC3                --------->ANAC55(2) -------AHL20(2)                  ------->MYC3                <---------ANAC55(2) ------>AHL20(2)               <---------ALFIN1              --------------->AtSPL8 >HSFC1(1)                   <---------ALFIN1        <---------DAG2           --------->AHL20(2) -HSFC1(1)                 --------->SPL7 <-----------GT1   <-----------GT1 --------->AHL20(2) >HSFB2a(2)            <---------------AtSPL3        <----------DOF2 --------->TOE2(3) -HSFB2a(2)            <---------------AtSPL8    <---------ALFIN1<---------ARR14(2)      --------->YAB1   ataaatactctcttaccaattcaaaatggtaccacacgttttttatacgccacaacttttttatacgtatcccttaaaaaatatatagcaataacaatag  7962000                                                        --------->YAB1                                                     <----------DOF2                                                    ------>ZmHOX2a(2)                                                   <------ZmHOX2a(2)                                                  <---------ARR14(2)              <---------ARR11(3)                  <---------ARR11(3)              --------->ARR11(3)                  --------->ARR11(3)              --------->SPL7         <---------ANAC46                         --------->ARR14(2) --------->ANAC46        <---------TOE2(3)              <---------ARR14(2)  --------->YAB1       <---------SPL7  <---------------AGL15                --------->ARR14(2) <---------YAB1      <---------------AtSPL3   ttttctattttacgtagatgttcaacataacatttgtatcggatttgagaccgatcttttatgataagtttacgaaaatggtcgtactgtagctatgtga  7962100  Previous    Next  AGI:  At2g18300.1    Description:  basic helix-loop-helix (bHLH) family protein. similar to BEE2 (BR ENHANCED EXPRESSION 2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G36540.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO47615.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 7959749    to: 7961649    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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