Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <---------ARR11(1)                                             <----------DOF2 --------->ARR14(2)                                       --------->ARR11(3)    --------->ARR11(3)                                       <---------ARR11(3)    <---------ARR11(3)                    <-                                     --------->ETT(2)        <---------ARR14(2) <---------AHL20(2) --       --------->ARR11(3)    --------->ARR14(2)             <---------CCA1(2)  --------->AHL20(2)----       <---------ARR11(3)    <---------GLK1(2)           --------->LBD16    <----------DOF2      <---       --------->GLK1(2)     <---------ARR14(2)   <-----------GT1      ------>ZmHOX2a(1)<-----------GT1   gagaaacaaaatctttgaaactgaataatcggattcttgtagaccttctttataacttccccatatctctctccttctcttttaaattttgaaccattct  7949000                                                                                          ===========                                                                                          ------>ZmHOX2a(2)                                                                      --------->ANAC58  --------->ARR11(3)                                                           <---------ANAC46             <---------ARR11(3)                                                           <---------ANAC58            <---------ICU4                                                           <---------ANAC58            --------->YAB1 --------HSFB2a(2)                                        --------->MYB52(2) <---------ANAC58 ------->HSFB2a(2) --------->At4g35610                  <---------ARR14(2)   <---------ANAC46 ----->At4g35610   <---------ZAT14                      --------->ARR14(2)   <---------ANAC58    <<<< ------At4g35610   <---------At4g35610             --------->MYB52(1) --------->ANAC58--------->ICU4   tctgaaaacacagagagcgagagcagagagagagagaagcgaagttgtgagagaaacggttccttgtttaacaagcatttcttgggtaatgatctcttct  7949100                                                                                 --------->LBD16                                                                                --------->LBD16                                                                                <---------HSFB2a(2)         --------->ARR11(3)                                                     --------->HSFB2a(2)     <----------DOF2                                                           <---------LBD16   ===============HOX2a_HOX2a                                            <----------DOF2   ------>ZmHOX2a(1)               <------------CBF                   <---------ARR14(2) =========HOX2a_HOX2a --------->TOE2(3) --------->WRKY38(1)           --------->ARR14(2) <<<<<TBF1 ------>ZmHOX2a(2)    >>>>>>>>>>>>>>>>>LFY          <----------DOF2 <---------LBD16   tcttcctctttgatctctagggtttcttaatttcatccattgttgactcgcttatactctctctcttttgcagttctttctcccggaaaactgaaacatc  7949200                    <----------DOF2                   ------>ZmHOX2a(2)                  <------ZmHOX2a(2)                 --------->ARR14(2)                 <---------ARR11(3)                 --------->ARR11(3)                 <---------ARR14(3)              ---------->DOF2                 --------->ARR14(3)        <---------ALFIN1                 <-----------ARR10       ------>MYB83                 <---------ARR14(2)      ------>MYB46(1)                 <---------AGP1         --------->ANAC46                        <---------ANAC58               ----------->ARR10      --------->ANAC46                          <---------ANAC58          <---------DOF5.7(2)         --------->ANAC58                       <----------DOF2    -----          --------->MYB52(1)    <-----------GT1 <---------MYB52(1)      ------>ZmHOX2a(1)  ---------- <-----------HVH21<---------RVE1(1)   --------->ANAC58           <---------CCA1(2)  ------------>CBF   ccgtttcagagataacgaagatctttactctgtttcacaaacccaacaccgtaatgctctgttcttcttatctccttctctttcgtttcaatattcaatt  7949300               <----------DOF2               <---------DAG2   --------->ANAC55(2)   <---------ANAC55(2)        <---------YAB1   <---------ANAC58      ------>ZmHOX2a(1)                      --------->At4g35610   <---------ANAC58 <---------ANAC58                        <---------ARR11(3)   <---------ANAC46 <---------ANAC58<---------YAB1          --------->ARR11(3) ------->CBF<-----------GT1  <---------GLK1(2)        <---------YAB1 -->CBF --------->ICU4   <---------At4g35610   <-----------GT1------>ZmHOX2a(2)         <---------ANAC46   caatttcgtgattcttactttttcgtcctctgattcttgttatagggttttacaagatgaatgatctgatgacaaaatcgttcttaagttatgtggaatt  7949400                  --------->CCA1(2)                 <---------ARR14(2)                 --------->ARR11(3)                 --------->ARR11(1) --------->CCA1(2)                 --------->ARR14(2)--------->ARR14(2)               ----------->ARR10   <---------ARR14(2)                          <---------At4g35610            <------ZmHOX2a(1)  ------>ZmHOX2a(2)        --------->DOF5.7(2)    --------->At4g35610            ==========================HOX2a_HOX2a      <----------DOF2       <-----------RAV1(2)      --------->ANAC58   <---------At4g35610  ----------->GT1               --------->LBD16      --------->ANAC58  --------->GLK1(2)    --------->DAG2                ----------->RAV1(1)     --------->TOE1(2) <---------GLK1(2)   ---------->DOF2                <---------LBD16   gaagaaacaagcgaggacagatatggaatctgatcgagatttggagaaaggtgaagactttaacttcgatttcagtcccgcagatgaagaaaacctctct  7949500                                                                                                    -                                                                                                  ---                                                                                               ======                                                                        --------->TOE2(3)      ------                       --------->YAB1      <------ZmHOX2a(2)            <---------MYB59      --------        --------->ANAC46                  --------->ARR11(3)   ------>ZmHOX2a(2)        ------>MYB83-        --------->ANAC58     --------->TOE2(3)               --------->ARR14(2)         ------>MYB46(1)        --------->ANAC58     --------->TOE1(3)    <---------CCA1(2)     --------->TOE1(3) <---------ATHB12   <----------DOF2 --------->MYB46(3)     <---------ARR11(3) <---------ARR11(3)       <---------MYB59   ggtttctttcaagaaatcgaaaccatcaaaaccctaatcgaagagatcactcatctcttactcgatctccaaaacctaaacgaagagaccaaatcaactc  7949600                    <--------P                   <---------ANAC58                   <-------GAMYB                  <---------MYB46(3)              <---------ANAC55(1)              --------->O2              <---------bZIP60(2)              <---------ANAC58              <---------O2              --------->TGA1a              <---------TGA1a              --------->ANAC55(2)              ===============MYC_MYB              =============MYC_MYB              <---------ANAC55(2)          ------>ZmHOX2a(2)         <------ZmHOX2a(2)        --------->ARR14(2)        --------->ARR11(3)        <---------ARR11(3)        <---------AGP1 <---------ANAC58        <---------ARR14(2)        --------->AGP1 <---------ANAC58        <-----------ARR10        --------->ARR14(3)      ----------->ARR10<---------ANAC46 -------->ZAT14   <---------DEAR3(2) ------>ANAC46<---------ANAC46 =======================MYC_MYB                                                   --------->TOE1(3) ->GAMYB<---------ARR14(3)                                            <---------ALFIN1         <----- ->At4g35610  <---------ANAC58                 <-----------TGA1     ----------->RAV1(1)      -------- -------->At4g35610<---------ANAC58        --------->YAB1     --------->SPL7      --------->TOE2(3)   acagcaccaagatcttacgtgggttgcgagacagaatggaatcaaacatcgtcaccatctctcgtaaggccaacacagtcaaaaccctaatcgagactct  7949700                                                      =====================HOX2a_HOX2a                                              --------->LBD16                                             <---------AtLEC2                                             <---------ANAC58                                             <---------ANAC58                                             <---------ANAC46                                         ------>ZmHOX2a(2)                                         ====================HOX2a_HOX2a                                        <------ZmHOX2a(2)                                       --------->ARR14(3)                                       --------->ARR11(3)                                       <---------ARR11(3)                                       <-----------ARR10                                       --------->ARR14(2)                                       <---------ARR14(2)                                --------->ANAC46      <------ZmHOX2a(1)                      <---------TOE1(2)--------->GLK1(2)                      --------->SPL7   <---------ARR14(3)                    --------->TOE1(2) =====================================HOX2a_HOX2a                    --------->TOE2(2) <------ZmHOX2a(1)                    <---------SPL7   <---------HSFC1(2)     <---------ARR11(3)                  --------------->AtSPL3=====================HOX2a_HOX2a --------->MYB52(1)         <                 <---------ARR14(2)  <---------HSFB2a(1)    --------->ARR11(3)                     --                 --------->GLK1(2)   --------->HSFC1(2)   --------->ANAC58                        <--                 --------->ARR14(2)  --------->HSFB2a(1)  --------->ANAC58                        --- ----LBD16    <---------ANAC58  --------->ANAC58--------->ZAT18      --------->ZAT6 ---------->DOF2-- ->GLK1(2)    <---------ANAC58  --------->ANAC58--------->REM1(2)   <------ZmHOX2a(2)             ---   ggagaagagaaacgttgcgaatcgtacgagtttcaaggaaggatcttgcgtggacaggacaagaacttcgatcactaatggagttagaaagaaacttaga  7949800                                         <---------YAB1                                       <---------At4g35610                                    <----------DOF2          ---------->DOF2                                 --------->GLK1(2)       ------>ZmHOX2a(2)                                 --------->ARR14(2)     <------ZmHOX2a(2)    <---------YAB1               --------->ARR11(3)    <---------ARR11(3) -------TEIL  <-------TEIL       <---------ARR11(3)    --------->ARR11(3) ------->CCA1(2)                 <-----------ARR10     --------->ARR14(2) -------ARR14(2)                 <---------ARR14(2)    --------->ARR14(3) ------>ARR11(1)                <---------GLK1(2)      <---------ARR14(3) ------->ARR14(1)               <---------ARR14(1)     <---------ARR14(2)                       ----- ------>ARR14(2)   --------->ATHB12<---------ICU4      <---------AGP1    <---------AHL20(2)     -----   gatacgatgagtgagtttcatcgattgagggagagaatctttgctgattacagagaagatctcaaaaggaagtattttttagcgactggtgaagaaccaa  7949900  Previous    Next  AGI:  At2g18260.1    Description:  SYP112 (syntaxin 112); SNAP receptor. Identical to Syntaxin-112 (SYP112) [Arabidopsis Thaliana] (GB:Q9ZPV9;GB:Q1PF48); similar to SYP111 (syntaxin 111), SNAP receptor [Arabidopsis thaliana] (TAIR:AT1G08560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38789.1); contains InterPro domain Syntaxin, N-terminal; (InterPro:IPR006011); contains InterPro domain Syntaxin/epimorphin, conserved site; (InterPro:IPR006012); contains InterPro domain t-SNARE; (InterPro:IPR010989) Range:  from: 7949357    to: 7950470    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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