Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <---------YAB1                                    --------->ATHB51                                    --------->ATHB12             <------ZmHOX2a(1)                                   <---------YAB1        --------->GLK1(2)              --------->ETT(2)                             ----------->GT1          --------->ARR11(3)                <---------ETT(2)   --------->MYB52(2)   ---------->DOF2  <---------TOE2(3)   --------->LBD16          --------->REM1(2) ->ID1               ------>ZmHOX2a(1)  --------->YAB1<---------ARR11(3)<---------GLK1(2)   ttggtttgtttgtttgttttctcctcaaaagttgtttattattgatgatagaacaagataatccgaaggagacagaaactccaaactgtgtcgacgagct  7946600  <---------ZAT14  <---------At4g35610            <---------REM1(1)  --------->ZAT2--------->HSFB2a(2)   <---------ANAC58                     ----------->HVH21  <---------ZAT2<---------HSFB2a(2)   <---------ANAC58            -------->ZAP1---------->DOF2  --------->ZAT14                <---------MYB46(3)             <---------WRKY18(1)  --------->At4g35610            <-----------RAV1(1)           ----------->HVH21 ----------->GT1   actgagcagagatagtttctgaaactcttagattgttgttgctagtttggcttcatatgtgaaacttgaccgatgctcggacaaagaaaaaatgtaaacc  7946700                                                                                                 <---                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                              <------                                                                                              <------                                                                                              ------>NtERF2                                                                                              -------                                                                                             --------                                                                                             <-------                                                                                            <--------                                                                                            ---------                                                                                            ---------                            -------->P                                                     <---------RAP2.3(1)                      --------->ALFIN1                                                     <---------DEAR4(2)                      <---------AtMYB61                                             <----------DOF2                    --------->ALFIN1                                               ==================                  ------->GAMYB         --------->MYB52(1)           --------->ANAC46      <---------ATERF1(1)              <---------WRKY38(1)    ------>ZmHOX2a(1)      --------->TOE1(3)      <-----------------AGL3              <---------WRKY12     <-----------------AGL1   --------->TOE2(3)   <---------GLK1(2)---- <---------AHL20(2) <---------ANAC46--------->TOE2(3)    <-----------GT1<---------ANAC46  --------->ANAC46   tatttcattcccttgttcaacggtgtggtctaccccttcctcaaacggctcgtcttatattaccttaaactacgtcgtgttggattctttaaacggcgcc  7946800       --------->SPL7     <---------SPL7    <---------ANAC58    <---------ANAC58   --------------->AtSPL8   --------------->AtSPL3 ------RAP2.6(3) ---->RRTF1(3) ---->RAP2.3(2) -----ANAC46 ---->DEAR3(1) ---->RAP2.3(3) --->ORA47(2) --->RAP2.3(1) --->DEAR4(2) --->RRTF1(1) --->ATERF1(1) -NtERF2 --------->TOE2(3) ---RAP2.3(1)                                                              <---------TOE1(2)      <-- ---ATERF1(1)                               <-----------HVH21 --------->AHL20(2)          <---------MYB52(1) -->ABI4(2)                           ---------->DOF2       ------>ZmHOX2a(1)            <---------RAP2.6(3) ->DEAR3(1)                    <----------DOF2             --------->TOE2(3)           ---------->ID1 --DEAR3(1)     --------->ANAC58    ------>ZmHOX2a(1)      <---------------AGL15 <---------AHL20(1) -ABI4(2)--------->YAB1       <---------ANAC58             --------->TOE1(3) <------ZmHOX2a(1)   <--- >RAP2.3(1)     --------->ANAC58   --------->TOE1(3)       --------------->AGL15 --------->ARR11(3) >ATERF1(1)     --------->ANAC46   --------->TOE2(3)      ----------------->AG   --------->AHL20(1) ===========================================================================MADS_MADS<-----------GT1 -->NtERF2    --------->ZAT6  <---------ANAC58         <----------DOF2     <---------TOE2(2)     ----   gtcttgccgtaccataacacgacatcgtaatagctttccttaaaacggtcgtatcaactttccttaaaatgtagtcgtaggaatattttgccgttttgtt  7946900                                                                                --------->ARR14(2)                                       ---------->DOF2                          <---------ARR14(2)                                  ------->MYC3                               <---------TOE1(3)                          --------->ANAC58                                   <---------TOE2(3)                          <----------ID1                             <------ZmHOX2a(1)                          --------->ANAC58                        <---------At4g35610     --------->ALFIN1 -----GAMYB--------->TOE2(3)   <---------ALFIN1                   --------->At4g35610    *TSS ------MYB46(3)           --------->ANAC46                      <---------WRKY12--------->ARR11(3) ----->MYB52(2)   ---------->DOF2 <-------MYC3                <-----------HVH21<------ZmHOX2a(1)   tgttgaaaaactacattagagaaagaaaacgacacacatgttaaagcagaatgggtttagaaatggtcagaggagagttgaggattttgggagtgggaat  7947000                                                                                                  <--                 <---------At4g35610                                                              ---       <---------ANAC46                                                                          <---       <---------ANAC58 <---------GLK1(2)              --------->ATHB12                          <---       <---------ANAC58 --------->ARR14(2)             <---------AHL20(2)                        <---   <---------ANAC58     <---------ARR14(2)            --------->AHL20(2)                         ----   <---------ANAC46  --------->ANAC55(2) ---------->DOF2         ---------->DOF2           --------->CCA1(2)   <---------ANAC58 <---------LBD16 ----------->HVH21<----------DOF2          --------->YAB1     ----   cgatttcttgtgtgtctgtagctacggattcgattcgagtgaccaaaggaactcgatttattggttctaaagtctccaaatcagaaaattcagagacgag  7947100              --------->LBD16             <---------HSFB2a(2)             --------->HSFB2a(2)            <---------LBD16          --------->ARR14(2)          <---------ARR14(2)         --------->At4g35610         <---------ZAT2         <------NtERF2                                               <-------TEIL         --------->ZAT2                                              --------->SPL7         <---------At4g35610                                       <------NtERF2         --------->ATERF1(1)                                       <---------SPL7                   <        <---------ATERF1(1)                                       <---------DEAR3(2)                <        <<<<<<<<<AtERF-4                                <---------ANAC58                            -        <<<<<<<<<AtERF-3           ------>NtERF2   --------->At4g35610                              - -------------AGL15                --------->LBD16 --------->ZAT2 <---------MYB46(3)                < ------------>AGL15               <---------DEAR3(1)    <---------ANAC58                            - --------------AGL3        <---------ARR11(3)      <---------ZAT2<---------DEAR3(1)                <- --------------AGL1        --------->ARR11(3)<---------MYB52(1) <------NtERF2 ------>ZmHOX2a(2)    <- --------------AGL2    ---------->DOF2  --------->ARR14(2)    <---------DEAR3(1)               <----- ------------->AGL3  <-------TEIL<---------LBD16   <---------At4g35610        ======================= ------------->AGL2 --------->CCA1(2)   <---------ARR14(2)   <---------HSFB2a(2)      --------->ANAC46   ccctaaatggcagctccggaagattcaaagatgtctccggcgaattcgtttggagctgtcgttctcggcggtacgtttgatcgattacacgatgggcatc  7947200      ------>ZmHOX2a(1)                                      <---------ANAC58 --------->KAN4(2)                                           <---------ANAC46 ---------HSFB2a(1)                               <---------ANAC58 ---------HSFC1(2)                                <---------ANAC46 -------->KAN4(1)                                 <---------ANAC55(2) -------->HSFB2a(1)                               <---------ANAC58 ---------KAN4(1)                                 --------->ANAC55(2) -------->HSFC1(2)                                <---------ANAC55(1)                    <---------AHL20(2) --------TOE1(2)                                <---------TGA2(2)       --------------->AtSPL3 --------KAN4(2)                             <---------At4g35610        --------------->AtSPL8 -NtERF2               <-----------GT1       --------->At4g35610        <---------------AtSPL8<------ ============HOX2a_HOX2a                 --------->ARR14(2)  <---------ANAC58   <---------MYB52(2)   gaatgttcctcaaggtaattgggtttttcttctctctcttcggtttctgcttacgtatgggtttcttgagaattgaagtacaactatcgatttttttggg  7947300                        --------->ATERF1(1)                       --------->ZAT2                       <---------At4g35610                       <---------ZAT2                       --------->At4g35610                      <-----------ARR10                      --------->ARR14(2)                      <---------ARR14(2)                     <------NtERF2                     --------->ATERF1(1)                    --------->LBD16                   <---------ANAC46                   --------->ALFIN1                   <---------DEAR3(1)                  <---------ABI4(1)                  <---------LBD16                  --------->ATERF1(1)                  <------NtERF2                  --------->At4g35610                  <---------At4g35610                 <---------DEAR4(2)                 <---------RRTF1(1)                 <---------RAP2.3(1)                 <---------ORA47(2)                 ------>NtERF2                 <---------ERF1                 <---------RAP2.6(1)                 <---------ATERF1(1)                <---------RAP2.3(2)                <---------RRTF1(3)                <---------RRTF1(2)                <---------RAP2.6(2)                <---------RAP2.3(3)                <---------ATERF1(2)                --------->DEAR3(1)                --------->ATERF1(2)                <---------DEAR3(1)                <---------ANAC46               --------->DREB2C(1)               --------->RAP2.3(1)               --------->DEAR4(2)               --------->ATERF1(1)               <------NtERF2               --------->At4g35610               <---------At4g35610               <---------ABI4(1)              <---------ATERF1(1)              <---------ERF1              <---------RAP2.3(1)              <---------RAP2.6(1)              <---------DEAR4(2)              <---------ORA47(2)              ------>NtERF2              <---------RRTF1(1)             --------->ATERF1(2)             <---------ATERF1(2)             <---------DEAR3(1)             --------->ALFIN1             <---------RRTF1(3)               <---------ZAT6             <---------RAP2.3(2)         ------>ZmHOX2a(2)             <---------RAP2.3(3)        <------ZmHOX2a(2)                      --------->ANAC58             <---------DREB2C(2)       --------->ARR14(2)                      --------->ANAC58             <---------RRTF1(2)        <---------ARR14(2)                     --------->DAG2            --------->ATERF1(1)     ------>ZmHOX2a(2)               --------->YAB1 --------->ANAC58 ----------->GT1--------->ALFIN1  --------->ARR14(2)               <---------ATHB12--------->ANAC58 ---LBD16<-----------RAV1(2)      <---------ARR14(2)    ----------->HVH21    ---------->DOF2   <-----   ggatggaaaaatcaggcggcggcggagctggccagggatcggatcgtagtgggagtctgtgatggcccaatgttgacgaaaaagcaagtaagtgatagtg  7947400                                    <---------MYB46(3)                               <---------DAG2                               <----------DOF2                             --------------->AGL15                             ----------------->AGL1                             ----------------->AG                             <---------------AGL15                             ========================================================================                            ----------------->AGL3                            <-----------------AGL3                <------MYB83                            =========================================================================                            <-----------------AGL2                <------MYB46(1)         -----------                            ----------------->AGL2                ----------->GT1         ===========                            =========================================================================                            =======================================MADS_MADS             <---------ANAC46                            ----------------->AG                 --------->MYB59         <---------ANAC58                            <-----------------AG            ---------->DOF2        <----------DOF2                            <-----------------AGL1 <---------------AGL15           <---------DAG2                            ----------------->AGL1 --------------->AGL15      <-----------GT1                          <-----------GT1          ==================================================    <----------DOF2 <---------ARR14(2)            ----------------->AGL1<----------DOF2  <---------ANAC58 ----ZAT6    <---------ANAC46========================================================================   atcacactttcagtctcttgtagatttgtttccctttttggttagattagtagcaatatagggaaagttggtaacttttgtttccctttttgcttagatt  7947500  Previous    Next  AGI:  At2g18245.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G19970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22826.1); contains InterPro domain Protein of unknown function DUF829, eukaryotic (InterPro:IPR008547) Range:  from: 7944364    to: 7946682    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g18250.1    Description:  ATCOAD (4-PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE); nucleotidyltransferase/ pantetheine-phosphate adenylyltransferase. similar to unnamed protein product [Vitis vinifera] (GB:CAO16378.1); contains InterPro domain Cytidylyltransferase; (InterPro:IPR004820); contains InterPro domain Cytidyltransferase-related; (InterPro:IPR004821); contains InterPro domain Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); contains InterPro domain Dephospho-CoA kinase; (InterPro:IPR001977) Range:  from: 7946989    to: 7948760    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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