Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    --------->ZAT2                                                                                  <---------ZAT2                                                                                  <---------At4g35610                                                                                  --------->At4g35610                                                                            --------->ATHB12                                                                            --------->ATHB51                                                                         <--------HAHB4                                                                         --------->YAB1             -                                                                         <---------ICU4           ---                                                                        <---------YAB1          -----                                                                        --------->ICU4--------->ALFIN1                                                                       <---------ARR11(3)       -----                                        <---------ICU4                 --------->ARR11(3)      ------                             ---------->ID1                          --------->ICU4 <-----------RAV1(1)                            <-----------GT1                  ----------->GT1<---------ICU4<-------GAMYB                 <---------DAG2<----------DOF2              ----------->GT1<---------YAB1----------->GT1                 <----------DOF2     --------->YAB1  <-----------HVH21--------->YAB1--------->ALFIN1-           <-----------GT1 <<<<<<<<<<GT-3b  --------->GLK1(2)<----------ID1--------->ICU4<---------ANAC46   gttgaataacaaattaccacttttgatatttttcttttttcataagtatctaatatgtcaaatgggaaaaaatgatcattattgagctgtggggttaacc  7942000                                                                                                -----  ------->GAMYB                                                                                 ----- --------->MYB46(3)       ----------->HVH21                                                     ----- -------->ANAC58       ------->TEIL                                                            ------ ------>MYB46(3) <---------SPL7                                                         --------->ANAC58 ---->TOE2(3)   <---------ANAC46                                                        --------->ANAC58 -->GAMYB       <---------ANAC58                                                        --------->ANAC46 --->MYB46(3) <-----------HVH21                                     <-----------GT1 --------->YAB1 -------->ANAC58<---------ANAC58                        <-----------HVH21         --------->GLK1(2)--   acaaccaaaaaaactgtgtcgtatggatgtgaccatcgagcagtgtttttttggtgactgtcaactagaattacaagtctagagaatcatacgcaaaacg  7942100                                    <-------TEIL                                   --------->GLK1(2)                                   --------->ARR14(1)                                   --------->CCA1(2)                                  --------->ARR14(2)        <----------DOF2           <---------GLK1(2)             ----------->HVH21 ------>GT1 <---------TOE1(3)     --------->ARR11(1)       <------MYB83 ---->TOE2(3)                   ----------->ARR10          <------MYB46(1)                     ------ ---->TOE1(3)      --------->LBD16<---------ARR14(2)     <--------P       <---------------------WRI1 ----->GT1  <---------TOE2(3) ---------->DOF2     <----------DOF2     <---------GLK1(2)--------->AtLEC2 ------->AHL20(2) <---------HSFB2a(2)         <---------GLK1(2) <------NtERF2        <---------ANAC46   ttaaaattcggtttaaggtcccagagaaacaaaaaagattcggttttggattctttctggttgggcctcacagaatatcgaatcgttccatgtaaaaacc  7942200                                                                                        ------->MYC4                                                                                        ------->MYC2                                                                                        <-------MYC3                                                                                        ------->MYC3                                                                                        <-------MYC4                                                                                        <-------MYC2                                                                                       <---------TGA1a                                                                                       <--------ABF1                                                                                       --------->O2                                                                                       <---------O2                                                                                       --------->TGA1a                                                                                       --------->ANAC55(2)                                                                                       <---------ANAC55(2)                                                                                     <---------ALFIN1                                                                                  --------->ANAC46                                                                                  ----------->HVH21                                                                              <----------DOF2                                                                              ===================bZIP_DOF                                                                       --------->ARR11(3)       -----                                                     ----------->RAV1(1)      ===================bZIP_DOF           <---------ARR11(3)             <---------AHL20(2)           <-----------ARR10-------->ABF1  --------->DAG2                       --------->AHL20(2)              <---------ARR11(3) <---------- ---------->DOF2<-----------GT1        --------->AHL20(1)         ---------->DOF2 <---------ETT(1) ----------->AGL3                      <---------AHL20(1)         ===============================bZIP_DOF   aaaaaaagttcaacatattttccctactgggcttaaacaaatattttatgaagcccaacatgtttaacaaaagtatcttactttgcgacacgtgtcatgt  7942300             --------->WOX13(1)          <-----------TGA1          <-----------HVH21         --------->ANAC46         <---------TGA1a         --------->ANAC58         ==================================bZIP_DOF         --------->ANAC55(1)         <---------O2         --------->ANAC58         --------->bZIP60(1)         --------->LBD16         --------->O2               <---------HSFC1(1)         --------->bZIP60(2)        --------->HSFC1(1)                                             <-         --------->TGA1a            <---------HSFB2a(2)                                            --        <-----------STF1            --------->HSFB2a(2)                      --------->ANAC58     <-- ------------------>TaNAC69(2)  <----------DOF2           <----------ID1     --------->ANAC58     --- -HVH21<---------ALFIN1    ------>ZmHOX2a(1)       <----------DOF2 *TSS      --------->ANAC46     <--   tccttctccccacgtcattcagtttcttcctcttctttccagaaaaaccaagactttaatacgactaagaaaaattcagacgaaactgagaaactttcaa  7942400              --------->YAB1            <---------ARR11(3)  <---------WOX13(1) --------AHL20(2) ------->AHL20(2)                                                            <---------YAB1 -------AHL20(2)   <---------------AGL15                                --------->ATHB12 ------>AHL20(2)   ------>ZmHOX2a(1)                               --------->ZAT14 -------AHL20(1)  --------->TOE2(3)                                <---------ZAT14         <---------   tttaattggttcaaaatcatcctaaatcgagtagattgttttgaatcgatttttgaagttgattcgaagttcagtgattgtgattagaatttataaccag  7942500                          --------->ARR14(2)                          <---------ARR14(2)                          <---------ARR11(3)                              <---------At4g35610                          <---------GLK1(2)                 ---------->DOF2                     <----                    --------->DAG2                     ------->TEIL       --------->At4g35610--------                   ---------->DOF2         <---------AtLEC2 <------ZmHOX2a(1)             <---------ANAC58 --GT1   <---------TOE2(3)--------->ARR11(3) --------->AtLEC2          ---------->DOF2    <---------ANAC58   acccagtttttgaggtgaagaaaaagcagattttgtgttcaatttccatggaagacgaaccaggaagcgaaaatgaagcagacaccatagttgcttcacc  7942600                                                            ------>ZmHOX2a(1)                                                       <---------At4g35610                                                       --------->At4g35610                                                     ------>ZmHOX2a(2)                                                     ==============HOX2a_HOX2a                                                    ===============HOX2a_HOX2a                                                    <------ZmHOX2a(2)                                                    --------->CCA1(2)                                                   --------->ARR14(2)                      --------->HSFB2a(2)          <---------AGP1                      <---------HSFB2a(2)          <---------ARR14(2)                         -------                      <---------HSFC1(1)           --------->ARR11(3)                        <-------                  --------->ARR14(2)               <---------ARR11(3)                  <----------DOF2        ----------->GT1                            <-----------ARR10           <---------ANAC58 -----ALFIN1      <---------ARR14(2)             ----------->ARR10             <---------ANAC58  <--- ->REM1(1)   --------->GLK1(2)       <---------ICU4--------->AGP1              <---------ANAC46  ----   acttgcaaaatggagaatcgaattctcgaaatcgtttcagaattacttagacagatctgctcctaacattgttcgaagatggcttgtgactttagtcgct  7942700         <---------ARR11(3)        <---------CCA1(2)     ------>ZmHOX2a(2)   --------->ARR11(3)                                                  --------->TOE2(3)   <---------ARR11(3)                      <---------MYB52(1)        --------->ARR11(3)<------MYB46(1)  --------->ZAT14                          --------->DOF5.7(2)       <---------ARR11(3)<------MYB83 -->At4g35610                        <---------HSFC1(2)             <---------CCA1(2)<---------WOX13(1) --DEAR3(1)                          --------->HSFC1(2)     <---------At4g35610    --------->ATHB12 ------ZAT14                    <---------TOE2(3)       <---------ANAC58          <---------YAB1 ----->ZAT14             <-----------------AGL3         <---------ANAC58   <---------CCA1(2)  <------   gcagtgatctatatctatagggtttactctgtttatggatacttcgttatctcttatggcttagctacttatatcttaaatctcttgattggtttccttt  7942800                                          <-----------GT1                                    <---------GLK1(2)                                  <---------YAB1                                  ------>ZmHOX2a(1)                                ------>ZmHOX2a(2)                               <------ZmHOX2a(2)             ==========================HOX2a_HOX2a             ------>ZmHOX2a(1)--------->ARR11(3)             =========================HOX2a_HOX2a           ------>ZmHOX2a(2)  <---------ARR14(2)                          <----------DOF2  ------>ZmHOX2a(1)           ==============================HOX2a_HOX2a                      <---------MYB52(1)  ---------->DOF2        <----------DOF2<----------DOF2    --------->At4g35610             --------->LBD16 ----DOF2--------->ARR11(3)   --------->ARR14(2)           <---------At4g35610    ---------->ID1   cccctaaagttgatcctgaacttgaagctttggatcctgattctttacctgttgatgagtctgatgagtataagccctttgttcgtcgtcttcctgagtt  7942900  Previous    Next  AGI:  At2g18240.1    Description:  RER1 protein, putative. similar to ATRER1B (Arabidopsis thaliana endoplasmatic reticulum retrieval protein 1B) [Arabidopsis thaliana] (TAIR:AT2G21600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22823.1); contains InterPro domain Retrieval of early ER protein Rer1; (InterPro:IPR004932) Range:  from: 7942367    to: 7943803    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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