Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <---------GLK1(1)                       --------->GLK1(1)                       <------ZmHOX2a(2)                      --------->ARR11(3)                      <---------ARR11(3)                      <---------ARR14(2)                                          --------->ANAC58                      <---------AGP1                                              --------->ANAC58                      --------->GLK1(2)                                        ------>MYB46(1)       ------>ZmHOX2a(1)------>ZmHOX2a(2)                                      ------>MYB83       --------->HSFB2a(2)                                                     -------->P       <---------HSFB2a(2)                                                <-----------GT1       --------->LBD16--------->ARR14(2)                                ------>ZmHOX2a(2)       =======================HOX2a_HOX2a                              <------ZmHOX2a(2)       ========================HOX2a_HOX2a                            --------->ARR14(2)      --------------------->WRI1                                      --------->ARR11(3)        ----- ------>NtERF2        <---------ARR14(3)                              <---------ARR11(3)        <---- ----->DEAR3(1)       <-----------ARR10                               <-----------ARR10--------->MYB46(3) -----GT1            <------ZmHOX2a(1)          ----------->GT1       <---------ARR14(2)------->GAMYB ---HVH21 ---------->DOF2          <----------DOF2          <-----------------AGL2--------->ANAC46<--   ctccgactcctcgaaagtatcgaggatctcttcgcctctttcgatagagattgtgaaatgcttctgttttgggatcttaccaactcgcaaccgctctgtt  7926000                                    <------NtERF2                                --------->DEAR3(1)                              ------>NtERF2        ------>ZmHOX2a(2)     --------->LBD16        ===============HOX2a_HOX2a <-----------HVH21       ================HOX2a_HOX2a--------->O2       <------ZmHOX2a(2)      <---------ATERF1(1)      <---------ARR14(2)     --------->ANAC46      --------->ARR11(3)     --------->DEAR3(1)      --------->ARR14(2)    <---------LBD16   --------->SPL7     <-------TEIL<---------ANAC46                                       --------->ARR11(3) <-----------HVH21   --------->CCA1(2)                            --------->ARR11(3)     <---------ARR11(3) ---->ARR14(2)  ------>ZmHOX2a(1)<------NtERF2                --------->LBD16--------->YAB1  <------- -----ARR14(2)  --------->LBD16--------->ATERF1(1)  --------->LBD16     <---------------------WRI1  < -------LBD16 ----------->RAV1(2)------>NtERF2    <---------LBD16 <---------ARR11(3)   ----------->ARR10   tccggtccgatcttgctcctgagatacatctccgccgcgtcgaagacttgattccggttcaatccgaagttctcgtcgatgatcacagtgagatactttg  7926100                                                              <---------ATHB12                                                        --------->SPL7                                                      <---------SPL7                                                      <---------MYB52(1)                                                     --------->LBD16                                                    --------->ANAC46                                             <---------HSFB2a(1)                         --------->ZAT2      --------->HSFB2a(1)                         --------->At4g35610 --------->HSFC1(2)                                  ----                         <---------ZAT2 <------ZmHOX2a(2)     --------->ICU4                     ----            --------->MYB52(1)         --------->ARR11(3)--------->ANAC58                    --------      ----------->GT1    <---------At4g35610 <---------HSFC1(2)                              -------- ---DOF2   <---------ARR14(2)          <---------ARR11(3)--------->ANAC58                    <------- ---------LBD16 <-----------HVH21----------->GT1   <---------LBD16             ---------->DOF2 <-----   atttcggagtgaaaaaccggtcgagtaagctggagaagtaagatcgaagcttctccggtacgaaatcatggagcatcgatctaaagagcatcaagaatcc  7926200                                                                               <---------AHL20(1)                                                                               --------->AHL20(2)                                                                               <---------AHL20(2)                                                                    <------NtERF2         <---------SPL7                                             --------->At4g35610        <---------ANAC58                                           <---------DEAR3(2)        <---------ANAC58                                          <---------At1g77200        <---------ANAC46                                          <---------DREB2C(2)       <-------TEIL           <---------DEAR3(1)                  --------->ETT(1)  <---------TOE2(3)         ------>NtERF2                         <---------DEAR3(1) ---------->DOF2           --------->DEAR3(1)                     <---------RAP2.3(3) ------->GT1            --------->DEAR3(1)                        <---------RAP2.6(2) ----->LBD16 <---------At4g35610     ---------->DOF2  <---------TOE2(3)  ----------->GT1 --------->WRKY38(1) ->GLK1(2)   --------->At4g35610--------->At5g28300<---------REM1(1)<---------At4g35610  --------->WRKY12 ->ARR14(2)--------->ZAT18 <---------O2          --------->At4g35610<-------GAMYB        ----------->HVH21 --ARR14(2)<---------ZAT14 ----------->HVH21<---------GLK1(1)    --------->RAP2.6(3)   <---------At4g35610 ----LBD16 --------->SPL7  --------->O2     --------->GLK1(1)   <-----------HVH21      --------->At4g35610   ggttaaagatgcgtacgctgagaacagcgacgacggtgagaaagagaaatctgatgaaggaaacattgtcggctgaagtaaaaaatttccgatgacctag  7926300              ---------->DOF2                                                                       -            ----------->HVH21                                                              --------->HSFB2a(2)          --------->LBD16                                  *TSS                            <---------HSFB2a(2)        <---------LBD16                       <---------HSFB2a(2)                      <----------DOF2   --------->AHL20(2)                         --------->HSFB2a(2)                 --------->CCA1(2) <   <---------AHL20(2)                   --------->DAG2    ----------->GT1        --------->ARR14(2) -  --------->AHL20(2)           --------->CCA1(2)         ----------->GT1         <---------ARR14(2) <   agaattttattccggtgaaagagagtgagagagatttgagaaaaggttttagaagtgatgagttaaaaatgtgagaaatagaagataggctttatagaag  7926400                                           <---------AHL20(2)                                           --------->AHL20(2)                                          --------->AHL20(2)           <----------DOF2          ----------->GT1                       --------->DAG2 ------>MYC3                     <------ZmHOX2a(1)                       ---------->DOF2 -------MYC3                   <---------TOE1(3)                   <----------ID1 ------>MYC2                   <---------TOE2(3)                   ----------->GT1           <------ZmHOX2a(1) -------MYC2             <---------------AGL15                    <-----------------------TaNAC69(2)<   cacatggcaaacacttttgtctgtttcacatttaaggatagaaaattaataagagacattttgagggaagcgaaaaaaagtaagagacttgcagaggaag  7926500                                       <-----------HVH21                                       <-----------TGA1                                      <---------O2                   <---------ANAC46                                      --------->ANAC58               --------->ANAC55(2)                                      --------->O2                   <---------ANAC55(2)                                      --------->ANAC46             --------->MYB52(1)                                      ============================bZIP_DOF <---------ALFIN1                                      --------->ANAC55(1)        ------->MYC2                                 <---------ZAT14                 <-------MYC2                                 --------->ZAT14                 ------->MYC3                                 --------->REM1(2)               <-------MYC3                               --------->LBD16                   <-----------HVH21                              <---------ANAC58                  --------->bZIP60(2)                           <---------SPL7                       --------->ANAC58                          --------->bZIP60(1)                   --------->ANAC55(2)                          <---------ANAC58                      <---------ANAC55(2)             ----------->GT1  <---------ANAC58                  <---------TGA1a            --------->ANAC58  <---------ANAC46                  ================================bZIP_DOF            --------->ANAC58 <-------TEIL                       --------->ANAC55(1)      <---------ANAC46    <---------ANAC58                      --------->ANAC46      <---------ANAC58    ========================================bZIP_DOF------>ZmHOX2a(2)      <---------ANAC58    ======================bZIP_bZIP       --------->ANAC58     <---------DEAR3(1)   <---------TGA1a                       --------->TGA1a    --------->ZAT18       --------->TGA1a               --------->DAG2   <------ZmHOX2a(2)    <---------ABI4(1)  ----------->HVH21               --------->ZAT14  --------->ARR14(2)    --------->SPL7   <---------ANAC55(2)   <---------At4g35610  --------->O2    <---------ZAT14  <---------ANAC58 --------->bZIP60(2)  ----------->HVH21     <---------ANAC58   --------->ALFIN1  --------->ANAC55(2)   --------->At4g35610  <---------O2     <---------ANAC58 <---------ANAC58    <---------ANAC58 <---------TGA1a  ===================bZIP_DOF <---------ANAC58  <---------AHL20(2) --------->ANAC58 <---------ZAT14  <---------ARR14(2) <---------ANAC46  <-----------GT1    --------->TGA1a  ---------->DOF2  <---------TCP20         ----- -----------------------TaNAC69(2) <---------REM1(2)--------->YAB1----------->HVH21  <----------DOF2   gaagcgtgcggtgcaaggaaattacttgacgtccgtgtacacgtcagaggtcaatagtaaagtgacacgtgacggatccacttgcttctttttttgtttg  7926600                                   --------->TOE2(3)                                   <-----------HVH21                                  <---------ANAC55(2)                                  --------->ANAC58            <---------YAB1                                  <----------ID1             <---------AHL20(1)         --------->ARR11(3)        --------->SPL7            --------->ANAC46           <---------AHL20(2)         <---------ARR14(2)       <---------MYB52(1)         --------->ANAC58         <---------YAB1               <---------ARR11(3)      <---------SPL7           <---------ARR14(2)          <---------AHL20(2)     --------->HSFB2a(2)     <---------ANAC58          --------->ARR14(2)       --------->AHL20(1)     <----------DOF2     <---------ANAC58 <---------ARR14(2)                <---------ARR11(3) <-----------------AGL1     <---------ANAC46 --------->ARR14(2)                --------->AHL20(2) <-----------------AG ---->ATHB12  <XXXXXXXXXXXXXXXXXXXXMIR835-5P            <---------AHL20(1)<-----------GT1  <---------   atttgttccgttcgatgaagaacatattcgacgaatacgtcaaataacatcgactcaaaatattatttttgttattttactcttttggaatatctttatt  7926700                                                       <---------AHL20(2)                                                   <---------AHL20(2)                                                   --------->AHL20(2)                                                   <---------ICU4                                                   --------->ATHB51                                                  --------->ICU4                                                <---------ICU4                                                --------->YAB1                               <-------                                               <---------AHL20(2)                           ---------                                               --------->AHL20(2)<-----------GT1      --------->YAB1     ----------->GT1   ----------->GT1       --------->YAB1    <----------DOF2       <---------ATHB12 -DOF2               <----------DOF2    ----------->GT1<-----------GT1             --------->WOX13(1)   ttcaaaatggataatttagtttactttgttaaaaaaaacgagtggaatattaattatttacatttctttacatttcagtgttttccaatcaaaacctttt  7926800                                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                     <------ZmHOX2a(1)                                                                   <---------TOE1(2)                                                                   <---------TOE2(3)                                                           --------->AHL20(2)                  <----------DOF2                          <---------ICU4            <-----------GT1                                <---------AHL20(2)        <----------DOF2       <---------YAB1                                      --------->ATHB51       <---------ALFIN1       --------->ICU4                                     <---------AHL20(1)     xxxxxxxxxxxxxxxxxxxx     <--------HAHB4     --------->ZAT14                   --------->AHL20(2) --------->ANAC58     --------->YAB1     --------->ZAT18            <----------DOF2 <---------TOE2(2) <---------DAG2     <---------ICU4     <---------ZAT14 --------->ATHB12  <---------AHL20(2) --------->ANAC58     <xx    <---------ATHB12 <---------ANAC46 <----------DOF2  --------->AHL20(2)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ---DOF2   <-----------GT1         --------->GLK1(2)   <---------AHL20(2)   <xxxxxxxxxxxxxxxxsmallRNA(i) >TOE2(3) <---------YAB1<---------ZAT18<---------YAB1 --------->AHL20(2) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   tgacgaatcatttttatcgtctttagtgtactaagagcatctttattggtaagcttttaaattatttcttaggataagaacgcctcactttaactcttat  7926900  Previous    Next  AGI:  At2g18193.1    Description:  AAA-type ATPase family protein. similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT2G18190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46634.1); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959) Range:  from: 7924587    to: 7926359    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version